RNA–Protein interactions for RNA: ENST00000462122.1

TRAF3IP1-204, Transcript of TRAF3 interacting protein 1, humanhuman

TSL 3

Gene TRAF3IP1, Length 922 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP1-204ENST00000462122 HPS6Q86YV9 775 aa10.9□□□□□ -0.66
TRAF3IP1-204ENST00000462122 OR4N5Q8IXE1 308 aa10.9□□□□□ -0.66
TRAF3IP1-204ENST00000462122 SAMD14Q8IZD0 417 aaPredicted RBP10.9□□□□□ -0.66
TRAF3IP1-204ENST00000462122 EXD3Q8N9H8 876 aa10.9□□□□□ -0.66
TRAF3IP1-204ENST00000462122 FNDC5Q8NAU1 212 aa10.9□□□□□ -0.66
TRAF3IP1-204ENST00000462122 MORN4Q8NDC4 146 aa10.9□□□□□ -0.66
TRAF3IP1-204ENST00000462122 B3GNT7Q8NFL0 401 aa10.9□□□□□ -0.66
TRAF3IP1-204ENST00000462122 PUM2Q8TB72 1066 aaKnown RBP eCLIP10.9□□□□□ -0.66
TRAF3IP1-204ENST00000462122 PIWIL2Q8TC59 973 aaKnown RBP10.9□□□□□ -0.66
TRAF3IP1-204ENST00000462122 CKAP2Q8WWK9 683 aa10.9□□□□□ -0.66
TRAF3IP1-204ENST00000462122 ABHD17AQ96GS6 310 aa10.9□□□□□ -0.66
TRAF3IP1-204ENST00000462122 C3orf30Q96M34 536 aa10.9□□□□□ -0.66
TRAF3IP1-204ENST00000462122 MAGEB18Q96M61 343 aa10.9□□□□□ -0.66
TRAF3IP1-204ENST00000462122 C7orf26Q96N11 449 aa10.9□□□□□ -0.66
TRAF3IP1-204ENST00000462122 NUDT9Q9BW91 350 aa10.9□□□□□ -0.66
TRAF3IP1-204ENST00000462122 MIEF1Q9NQG6 463 aa10.9□□□□□ -0.66
TRAF3IP1-204ENST00000462122 PNPOQ9NVS9 261 aa10.9□□□□□ -0.66
TRAF3IP1-204ENST00000462122 C5AR2Q9P296 337 aa10.9□□□□□ -0.66
TRAF3IP1-204ENST00000462122 CES1P1Q9UKY3 287 aa10.9□□□□□ -0.66
TRAF3IP1-204ENST00000462122 PPIEQ9UNP9 301 aaKnown RBP10.9□□□□□ -0.66
TRAF3IP1-204ENST00000462122 FAM208BQ5VWN6 2430 aa10.89□□□□□ -0.67
TRAF3IP1-204ENST00000462122 TRPC5OSA6NMA1 111 aa10.89□□□□□ -0.67
TRAF3IP1-204ENST00000462122 A8MUA0 341 aa10.89□□□□□ -0.67
TRAF3IP1-204ENST00000462122 C17orf105B2RV13 164 aa10.89□□□□□ -0.67
TRAF3IP1-204ENST00000462122 OR10H2O60403 315 aa10.89□□□□□ -0.67
TRAF3IP1-204ENST00000462122 PEX11AO75192 247 aa10.89□□□□□ -0.67
TRAF3IP1-204ENST00000462122 PRPS2P11908 318 aa10.89□□□□□ -0.67
TRAF3IP1-204ENST00000462122 PORP16435 677 aaPredicted RBP10.89□□□□□ -0.67
TRAF3IP1-204ENST00000462122 SDC1P18827 310 aa10.89□□□□□ -0.67
TRAF3IP1-204ENST00000462122 TNNI3P19429 210 aa10.89□□□□□ -0.67
TRAF3IP1-204ENST00000462122 ASMTP46597 345 aa10.89□□□□□ -0.67
TRAF3IP1-204ENST00000462122 CLCN2P51788 898 aa10.89□□□□□ -0.67
TRAF3IP1-204ENST00000462122 XKP51811 444 aa10.89□□□□□ -0.67
TRAF3IP1-204ENST00000462122 PGDP52209 483 aa10.89□□□□□ -0.67
TRAF3IP1-204ENST00000462122 EMX2Q04743 252 aa10.89□□□□□ -0.67
TRAF3IP1-204ENST00000462122 C2orf80Q0P641 193 aa10.89□□□□□ -0.67
TRAF3IP1-204ENST00000462122 SPRED3Q2MJR0 410 aa10.89□□□□□ -0.67
TRAF3IP1-204ENST00000462122 LACTB2Q53H82 288 aaPredicted RBP10.89□□□□□ -0.67
TRAF3IP1-204ENST00000462122 CRB2Q5IJ48 1285 aa10.89□□□□□ -0.67
TRAF3IP1-204ENST00000462122 AGAP7PQ5VUJ5 663 aa10.89□□□□□ -0.67
TRAF3IP1-204ENST00000462122 FAM71E1Q6IPT2 247 aa10.89□□□□□ -0.67
TRAF3IP1-204ENST00000462122 RGS9BPQ6ZS82 235 aa10.89□□□□□ -0.67
TRAF3IP1-204ENST00000462122 NFAM1Q8NET5 270 aaPredicted RBP10.89□□□□□ -0.67
TRAF3IP1-204ENST00000462122 CDC26Q8NHZ8 85 aa10.89□□□□□ -0.67
TRAF3IP1-204ENST00000462122 BRIX1Q8TDN6 353 aaKnown RBP10.89□□□□□ -0.67
TRAF3IP1-204ENST00000462122 ELP5Q8TE02 316 aa10.89□□□□□ -0.67
TRAF3IP1-204ENST00000462122 PTPMT1Q8WUK0 201 aaPredicted RBP10.89□□□□□ -0.67
TRAF3IP1-204ENST00000462122 TM9SF4Q92544 642 aa10.89□□□□□ -0.67
TRAF3IP1-204ENST00000462122 KLHL29Q96CT2 875 aa10.89□□□□□ -0.67
TRAF3IP1-204ENST00000462122 VMP1Q96GC9 406 aa10.89□□□□□ -0.67
TRAF3IP1-204ENST00000462122 ZNF764Q96H86 408 aaPredicted RBP10.89□□□□□ -0.67
TRAF3IP1-204ENST00000462122 ART5Q96L15 291 aa10.89□□□□□ -0.67
TRAF3IP1-204ENST00000462122 AGAP4Q96P64 663 aa10.89□□□□□ -0.67
TRAF3IP1-204ENST00000462122 PHF12Q96QT6 1004 aa10.89□□□□□ -0.67
TRAF3IP1-204ENST00000462122 SMAD5Q99717 465 aaKnown RBP10.89□□□□□ -0.67
TRAF3IP1-204ENST00000462122 NUF2Q9BZD4 464 aa10.89□□□□□ -0.67
TRAF3IP1-204ENST00000462122 SLC25A18Q9H1K4 315 aa10.89□□□□□ -0.67
TRAF3IP1-204ENST00000462122 ZNF552Q9H707 407 aaPredicted RBP10.89□□□□□ -0.67
TRAF3IP1-204ENST00000462122 MEAF6Q9HAF1 191 aa10.89□□□□□ -0.67
TRAF3IP1-204ENST00000462122 GIMAP4Q9NUV9 329 aa10.89□□□□□ -0.67
TRAF3IP1-204ENST00000462122 HEY2Q9UBP5 337 aa10.89□□□□□ -0.67
TRAF3IP1-204ENST00000462122 COPS7AQ9UBW8 275 aa10.89□□□□□ -0.67
TRAF3IP1-204ENST00000462122 MARCOQ9UEW3 520 aaPredicted RBP10.89□□□□□ -0.67
TRAF3IP1-204ENST00000462122 TEKT2Q9UIF3 430 aa10.89□□□□□ -0.67
TRAF3IP1-204ENST00000462122 UTS2RQ9UKP6 389 aa10.89□□□□□ -0.67
TRAF3IP1-204ENST00000462122 ENTPD4Q9Y227 616 aa10.89□□□□□ -0.67
TRAF3IP1-204ENST00000462122 ZNF451Q9Y4E5 1061 aa10.89□□□□□ -0.67
TRAF3IP1-204ENST00000462122 ZNF780BQ9Y6R6 833 aa10.89□□□□□ -0.67
TRAF3IP1-204ENST00000462122 KALRNO60229 2985 aa10.88□□□□□ -0.67
TRAF3IP1-204ENST00000462122 WASHC1A8K0Z3 465 aa10.88□□□□□ -0.67
TRAF3IP1-204ENST00000462122 ERAL1O75616 437 aaKnown RBP10.88□□□□□ -0.67
TRAF3IP1-204ENST00000462122 ATP1B1P05026 303 aa10.88□□□□□ -0.67
TRAF3IP1-204ENST00000462122 CELA2AP08217 269 aa10.88□□□□□ -0.67
TRAF3IP1-204ENST00000462122 KITP10721 976 aa10.88□□□□□ -0.67
TRAF3IP1-204ENST00000462122 ITGAMP11215 1152 aa10.88□□□□□ -0.67
TRAF3IP1-204ENST00000462122 BCKDHAP12694 445 aa10.88□□□□□ -0.67
TRAF3IP1-204ENST00000462122 CPMP14384 443 aa10.88□□□□□ -0.67
TRAF3IP1-204ENST00000462122 PCSK2P16519 638 aa10.88□□□□□ -0.67
TRAF3IP1-204ENST00000462122 DDX5P17844 614 aaKnown RBP10.88□□□□□ -0.67
TRAF3IP1-204ENST00000462122 CSNK2A2P19784 350 aaPredicted RBP10.88□□□□□ -0.67
TRAF3IP1-204ENST00000462122 TACR1P25103 407 aa10.88□□□□□ -0.67
TRAF3IP1-204ENST00000462122 SOX11P35716 441 aa10.88□□□□□ -0.67
TRAF3IP1-204ENST00000462122 RPL3P39023 403 aaKnown RBP10.88□□□□□ -0.67
TRAF3IP1-204ENST00000462122 ERVK-8P63133 956 aa10.88□□□□□ -0.67
TRAF3IP1-204ENST00000462122 RAPSNQ13702 412 aa10.88□□□□□ -0.67
TRAF3IP1-204ENST00000462122 LY6DQ14210 128 aa10.88□□□□□ -0.67
TRAF3IP1-204ENST00000462122 C6orf163Q5TEZ5 329 aa10.88□□□□□ -0.67
TRAF3IP1-204ENST00000462122 GALNT12Q8IXK2 581 aa10.88□□□□□ -0.67
TRAF3IP1-204ENST00000462122 MMP21Q8N119 569 aa10.88□□□□□ -0.67
TRAF3IP1-204ENST00000462122 LRRC25Q8N386 305 aaPredicted RBP10.88□□□□□ -0.67
TRAF3IP1-204ENST00000462122 SLC5A8Q8N695 610 aa10.88□□□□□ -0.67
TRAF3IP1-204ENST00000462122 APCDD1LQ8NCL9 501 aa10.88□□□□□ -0.67
TRAF3IP1-204ENST00000462122 SLC2A12Q8TD20 617 aa10.88□□□□□ -0.67
TRAF3IP1-204ENST00000462122 PSMF1Q92530 271 aa10.88□□□□□ -0.67
TRAF3IP1-204ENST00000462122 RIT1Q92963 219 aa10.88□□□□□ -0.67
TRAF3IP1-204ENST00000462122 UCN3Q969E3 161 aa10.88□□□□□ -0.67
TRAF3IP1-204ENST00000462122 FBXL20Q96IG2 436 aa10.88□□□□□ -0.67
TRAF3IP1-204ENST00000462122 PPP1R36Q96LQ0 422 aa10.88□□□□□ -0.67
TRAF3IP1-204ENST00000462122 EPS8L2Q9H6S3 715 aa10.88□□□□□ -0.67
TRAF3IP1-204ENST00000462122 AKTIPQ9H8T0 292 aa10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms