RNA–Protein interactions for RNA: ENST00000460050.1

THBS3-204, Transcript of thrombospondin 3, humanhuman

TSL 5

Gene THBS3, Length 879 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-204ENST00000460050 MAPK12P53778 367 aa13.26□□□□□ -0.29
THBS3-204ENST00000460050 DNAJB13P59910 316 aa13.26□□□□□ -0.29
THBS3-204ENST00000460050 NAA20P61599 178 aa13.26□□□□□ -0.29
THBS3-204ENST00000460050 BIKQ13323 160 aa13.26□□□□□ -0.29
THBS3-204ENST00000460050 CFAP157Q5JU67 520 aa13.26□□□□□ -0.29
THBS3-204ENST00000460050 ZNF324BQ6AW86 544 aaPredicted RBP13.26□□□□□ -0.29
THBS3-204ENST00000460050 HSDL2Q6YN16 418 aa13.26□□□□□ -0.29
THBS3-204ENST00000460050 C16orf47Q6ZP98 133 aaPredicted RBP13.26□□□□□ -0.29
THBS3-204ENST00000460050 DGAT2L6Q6ZPD8 337 aa13.26□□□□□ -0.29
THBS3-204ENST00000460050 FRMD7Q6ZUT3 714 aa13.26□□□□□ -0.29
THBS3-204ENST00000460050 TRABD2AQ86V40 505 aa13.26□□□□□ -0.29
THBS3-204ENST00000460050 ST13P4Q8IZP2 240 aaPredicted RBP13.26□□□□□ -0.29
THBS3-204ENST00000460050 MREGQ8N565 214 aa13.26□□□□□ -0.29
THBS3-204ENST00000460050 C1orf52Q8N6N3 182 aaKnown RBP13.26□□□□□ -0.29
THBS3-204ENST00000460050 TMEM178AQ8NBL3 297 aa13.26□□□□□ -0.29
THBS3-204ENST00000460050 PRR7Q8TB68 274 aa13.26□□□□□ -0.29
THBS3-204ENST00000460050 NR4A3Q92570 626 aa13.26□□□□□ -0.29
THBS3-204ENST00000460050 PPWD1Q96BP3 646 aaKnown RBP13.26□□□□□ -0.29
THBS3-204ENST00000460050 RBM18Q96H35 190 aaKnown RBP13.26□□□□□ -0.29
THBS3-204ENST00000460050 APOPT1Q96IL0 206 aa13.26□□□□□ -0.29
THBS3-204ENST00000460050 PELOQ9BRX2 385 aaKnown RBP13.26□□□□□ -0.29
THBS3-204ENST00000460050 TRIM45Q9H8W5 580 aaPredicted RBP13.26□□□□□ -0.29
THBS3-204ENST00000460050 LIN28AQ9H9Z2 209 aaKnown RBP13.26□□□□□ -0.29
THBS3-204ENST00000460050 OXSMQ9NWU1 459 aa13.26□□□□□ -0.29
THBS3-204ENST00000460050 COPS7AQ9UBW8 275 aa13.26□□□□□ -0.29
THBS3-204ENST00000460050 CCDC151A5D8V7 595 aa13.25□□□□□ -0.29
THBS3-204ENST00000460050 TMEM200CA6NKL6 621 aa13.25□□□□□ -0.29
THBS3-204ENST00000460050 UBFD1O14562 309 aaKnown RBP13.25□□□□□ -0.29
THBS3-204ENST00000460050 OR10H2O60403 315 aa13.25□□□□□ -0.29
THBS3-204ENST00000460050 SLC25A12O75746 678 aa13.25□□□□□ -0.29
THBS3-204ENST00000460050 CRYABP02511 175 aaKnown RBP13.25□□□□□ -0.29
THBS3-204ENST00000460050 SP1P08047 785 aa13.25□□□□□ -0.29
THBS3-204ENST00000460050 SSR4P51571 173 aa13.25□□□□□ -0.29
THBS3-204ENST00000460050 HK2P52789 917 aa13.25□□□□□ -0.29
THBS3-204ENST00000460050 FOXA1P55317 472 aa13.25□□□□□ -0.29
THBS3-204ENST00000460050 RNF4P78317 190 aa13.25□□□□□ -0.29
THBS3-204ENST00000460050 SRSF11Q05519 484 aaKnown RBP13.25□□□□□ -0.29
THBS3-204ENST00000460050 FHL5Q5TD97 284 aa13.25□□□□□ -0.29
THBS3-204ENST00000460050 NDUFAF5Q5TEU4 345 aa13.25□□□□□ -0.29
THBS3-204ENST00000460050 LIPMQ5VYY2 423 aa13.25□□□□□ -0.29
THBS3-204ENST00000460050 SLC25A25Q6KCM7 469 aa13.25□□□□□ -0.29
THBS3-204ENST00000460050 GALNTL5Q7Z4T8 443 aa13.25□□□□□ -0.29
THBS3-204ENST00000460050 ZNF227Q86WZ6 799 aa13.25□□□□□ -0.29
THBS3-204ENST00000460050 SRRM1Q8IYB3 904 aaKnown RBP13.25□□□□□ -0.29
THBS3-204ENST00000460050 CYP4Z2PQ8N1L4 340 aa13.25□□□□□ -0.29
THBS3-204ENST00000460050 TMEM156Q8N614 296 aa13.25□□□□□ -0.29
THBS3-204ENST00000460050 GBP7Q8N8V2 638 aaPredicted RBP13.25□□□□□ -0.29
THBS3-204ENST00000460050 BANPQ8N9N5 519 aa13.25□□□□□ -0.29
THBS3-204ENST00000460050 DNAJB8Q8NHS0 232 aa13.25□□□□□ -0.29
THBS3-204ENST00000460050 DOK4Q8TEW6 326 aa13.25□□□□□ -0.29
THBS3-204ENST00000460050 ZNF721Q8TF20 911 aa13.25□□□□□ -0.29
THBS3-204ENST00000460050 TMEM125Q96AQ2 219 aa13.25□□□□□ -0.29
THBS3-204ENST00000460050 SENP5Q96HI0 755 aaPredicted RBP13.25□□□□□ -0.29
THBS3-204ENST00000460050 FBXL20Q96IG2 436 aa13.25□□□□□ -0.29
THBS3-204ENST00000460050 ART5Q96L15 291 aa13.25□□□□□ -0.29
THBS3-204ENST00000460050 ACPTQ9BZG2 426 aa13.25□□□□□ -0.29
THBS3-204ENST00000460050 IQCGQ9H095 443 aaKnown RBP13.25□□□□□ -0.29
THBS3-204ENST00000460050 RAB21Q9UL25 225 aa13.25□□□□□ -0.29
THBS3-204ENST00000460050 YARS2Q9Y2Z4 477 aaKnown RBP13.25□□□□□ -0.29
THBS3-204ENST00000460050 PLLPQ9Y342 182 aa13.25□□□□□ -0.29
THBS3-204ENST00000460050 A0A1W2PS29 197 aa13.24□□□□□ -0.29
THBS3-204ENST00000460050 HRKO00198 91 aa13.24□□□□□ -0.29
THBS3-204ENST00000460050 WWP2O00308 870 aa13.24□□□□□ -0.29
THBS3-204ENST00000460050 GUCY1B2O75343 617 aa13.24□□□□□ -0.29
THBS3-204ENST00000460050 SPAG7O75391 227 aa13.24□□□□□ -0.29
THBS3-204ENST00000460050 OR2J2O76002 312 aa13.24□□□□□ -0.29
THBS3-204ENST00000460050 AGFG2O95081 481 aa13.24□□□□□ -0.29
THBS3-204ENST00000460050 IGKV3-11P04433 115 aa13.24□□□□□ -0.29
THBS3-204ENST00000460050 PIK3R1P27986 724 aa13.24□□□□□ -0.29
THBS3-204ENST00000460050 TDGF1P3P51864 188 aa13.24□□□□□ -0.29
THBS3-204ENST00000460050 ERVK-8P63133 956 aa13.24□□□□□ -0.29
THBS3-204ENST00000460050 HMGCS1Q01581 520 aa13.24□□□□□ -0.29
THBS3-204ENST00000460050 PCLAFQ15004 111 aa13.24□□□□□ -0.29
THBS3-204ENST00000460050 MAPKAPK3Q16644 382 aa13.24□□□□□ -0.29
THBS3-204ENST00000460050 SPRED3Q2MJR0 410 aa13.24□□□□□ -0.29
THBS3-204ENST00000460050 SCIMPQ6UWF3 145 aa13.24□□□□□ -0.29
THBS3-204ENST00000460050 C10orf107Q8IVU9 208 aa13.24□□□□□ -0.29
THBS3-204ENST00000460050 MMP21Q8N119 569 aa13.24□□□□□ -0.29
THBS3-204ENST00000460050 OR8K3Q8NH51 312 aa13.24□□□□□ -0.29
THBS3-204ENST00000460050 CHTF18Q8WVB6 975 aa13.24□□□□□ -0.29
THBS3-204ENST00000460050 CNPPD1Q9BV87 410 aa13.24□□□□□ -0.29
THBS3-204ENST00000460050 MYOTQ9UBF9 498 aa13.24□□□□□ -0.29
THBS3-204ENST00000460050 ERVK-19Q9WJR5 959 aa13.24□□□□□ -0.29
THBS3-204ENST00000460050 DIDO1Q9BTC0 2240 aaKnown RBP13.24□□□□□ -0.29
THBS3-204ENST00000460050 CROCCQ5TZA2 2017 aa13.23□□□□□ -0.29
THBS3-204ENST00000460050 DOPEY1Q5JWR5 2465 aa13.23□□□□□ -0.29
THBS3-204ENST00000460050 C1orf226A1L170 272 aa13.23□□□□□ -0.29
THBS3-204ENST00000460050 H3BQF6 201 aa13.23□□□□□ -0.29
THBS3-204ENST00000460050 NME2P1O60361 137 aa13.23□□□□□ -0.29
THBS3-204ENST00000460050 SEMA7AO75326 666 aa13.23□□□□□ -0.29
THBS3-204ENST00000460050 CRCPO75575 148 aa13.23□□□□□ -0.29
THBS3-204ENST00000460050 SLC35E2P0CK97 266 aa13.23□□□□□ -0.29
THBS3-204ENST00000460050 NME2P22392 152 aa13.23□□□□□ -0.29
THBS3-204ENST00000460050 MST1P26927 711 aa13.23□□□□□ -0.29
THBS3-204ENST00000460050 ACSM2AQ08AH3 577 aa13.23□□□□□ -0.29
THBS3-204ENST00000460050 ZNF267Q14586 743 aaPredicted RBP13.23□□□□□ -0.29
THBS3-204ENST00000460050 KRT71Q3SY84 523 aa13.23□□□□□ -0.29
THBS3-204ENST00000460050 ACSM2BQ68CK6 577 aa13.23□□□□□ -0.29
THBS3-204ENST00000460050 SLC48A1Q6P1K1 146 aa13.23□□□□□ -0.29
THBS3-204ENST00000460050 C9orf40Q8IXQ3 194 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms