RNA–Protein interactions for RNA: ENST00000454398.1

HLA-DPA3-207, Transcript of major histocompatibility complex, class II, DP alpha 3 (pseudogene), humanhuman

BASIC

Gene HLA-DPA3, Length 229 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA3-207ENST00000454398 OR51B5Q9H339 312 aa5.5□□□□□ -1.53
HLA-DPA3-207ENST00000454398 EHD1Q9H4M9 534 aa5.5□□□□□ -1.53
HLA-DPA3-207ENST00000454398 SH2D2AQ9NP31 389 aa5.5□□□□□ -1.53
HLA-DPA3-207ENST00000454398 SMYD2Q9NRG4 433 aa5.5□□□□□ -1.53
HLA-DPA3-207ENST00000454398 DNAJC11Q9NVH1 559 aa5.5□□□□□ -1.53
HLA-DPA3-207ENST00000454398 TEX10Q9NXF1 929 aaPredicted RBP5.5□□□□□ -1.53
HLA-DPA3-207ENST00000454398 CTNNAL1Q9UBT7 734 aa5.5□□□□□ -1.53
HLA-DPA3-207ENST00000454398 CNOT11Q9UKZ1 510 aaKnown RBP5.5□□□□□ -1.53
HLA-DPA3-207ENST00000454398 ZNF490Q9ULM2 529 aaPredicted RBP5.5□□□□□ -1.53
HLA-DPA3-207ENST00000454398 BOKQ9UMX3 212 aaPredicted RBP5.5□□□□□ -1.53
HLA-DPA3-207ENST00000454398 CAMK2AQ9UQM7 478 aa5.5□□□□□ -1.53
HLA-DPA3-207ENST00000454398 VWA7Q9Y334 891 aa5.5□□□□□ -1.53
HLA-DPA3-207ENST00000454398 MXRA5Q9NR99 2828 aa5.5□□□□□ -1.53
HLA-DPA3-207ENST00000454398 C2orf72A6NCS6 295 aa5.49□□□□□ -1.53
HLA-DPA3-207ENST00000454398 TUBAL3A6NHL2 446 aa5.49□□□□□ -1.53
HLA-DPA3-207ENST00000454398 ANKDD1BA6NHY2 528 aa5.49□□□□□ -1.53
HLA-DPA3-207ENST00000454398 LRRC14BA6NHZ5 514 aa5.49□□□□□ -1.53
HLA-DPA3-207ENST00000454398 CXorf49A8MYA2 514 aaPredicted RBP5.49□□□□□ -1.53
HLA-DPA3-207ENST00000454398 DVL2O14641 736 aa5.49□□□□□ -1.53
HLA-DPA3-207ENST00000454398 DNALI1O14645 258 aaPredicted RBP5.49□□□□□ -1.53
HLA-DPA3-207ENST00000454398 GNB5O14775 395 aa5.49□□□□□ -1.53
HLA-DPA3-207ENST00000454398 SIAH2O43255 324 aa5.49□□□□□ -1.53
HLA-DPA3-207ENST00000454398 SUSD5O60279 629 aa5.49□□□□□ -1.53
HLA-DPA3-207ENST00000454398 OR10H2O60403 315 aa5.49□□□□□ -1.53
HLA-DPA3-207ENST00000454398 CTNSO60931 367 aa5.49□□□□□ -1.53
HLA-DPA3-207ENST00000454398 NME6O75414 186 aaPredicted RBP5.49□□□□□ -1.53
HLA-DPA3-207ENST00000454398 EEDO75530 441 aaKnown RBP5.49□□□□□ -1.53
HLA-DPA3-207ENST00000454398 CLEC3AO75596 197 aa5.49□□□□□ -1.53
HLA-DPA3-207ENST00000454398 TTC4O95801 387 aa5.49□□□□□ -1.53
HLA-DPA3-207ENST00000454398 AIFM1O95831 613 aa5.49□□□□□ -1.53
HLA-DPA3-207ENST00000454398 LY6G6DO95868 133 aa5.49□□□□□ -1.53
HLA-DPA3-207ENST00000454398 TGFB1P01137 390 aa5.49□□□□□ -1.53
HLA-DPA3-207ENST00000454398 INHBBP09529 407 aa5.49□□□□□ -1.53
HLA-DPA3-207ENST00000454398 HIST1H1TP22492 207 aaPredicted RBP5.49□□□□□ -1.53
HLA-DPA3-207ENST00000454398 CPN2P22792 545 aa5.49□□□□□ -1.53
HLA-DPA3-207ENST00000454398 ATP5A1P25705 553 aaKnown RBP5.49□□□□□ -1.53
HLA-DPA3-207ENST00000454398 CNTFP26441 200 aa5.49□□□□□ -1.53
HLA-DPA3-207ENST00000454398 CCKARP32238 428 aa5.49□□□□□ -1.53
HLA-DPA3-207ENST00000454398 SLCO1A2P46721 670 aa5.49□□□□□ -1.53
HLA-DPA3-207ENST00000454398 KCNC1P48547 511 aa5.49□□□□□ -1.53
HLA-DPA3-207ENST00000454398 PIK3CGP48736 1102 aa5.49□□□□□ -1.53
HLA-DPA3-207ENST00000454398 MASP1P48740 699 aa5.49□□□□□ -1.53
HLA-DPA3-207ENST00000454398 FNTAP49354 379 aa5.49□□□□□ -1.53
HLA-DPA3-207ENST00000454398 PLIN5Q00G26 463 aa5.49□□□□□ -1.53
HLA-DPA3-207ENST00000454398 TNFRSF17Q02223 184 aa5.49□□□□□ -1.53
HLA-DPA3-207ENST00000454398 CHIT1Q13231 466 aa5.49□□□□□ -1.53
HLA-DPA3-207ENST00000454398 ZNF267Q14586 743 aaPredicted RBP5.49□□□□□ -1.53
HLA-DPA3-207ENST00000454398 SLC10A1Q14973 349 aa5.49□□□□□ -1.53
HLA-DPA3-207ENST00000454398 EFTUD2Q15029 972 aaKnown RBP eCLIP5.49□□□□□ -1.53
HLA-DPA3-207ENST00000454398 EBPQ15125 230 aaKnown RBP5.49□□□□□ -1.53
HLA-DPA3-207ENST00000454398 TGFBIQ15582 683 aa5.49□□□□□ -1.53
HLA-DPA3-207ENST00000454398 WIPI1Q5MNZ9 446 aaPredicted RBP5.49□□□□□ -1.53
HLA-DPA3-207ENST00000454398 FNDC7Q5VTL7 733 aa5.49□□□□□ -1.53
HLA-DPA3-207ENST00000454398 STEAP4Q687X5 459 aa5.49□□□□□ -1.53
HLA-DPA3-207ENST00000454398 NIPAL1Q6NVV3 410 aa5.49□□□□□ -1.53
HLA-DPA3-207ENST00000454398 OPN5Q6U736 354 aa5.49□□□□□ -1.53
HLA-DPA3-207ENST00000454398 RGS9BPQ6ZS82 235 aa5.49□□□□□ -1.53
HLA-DPA3-207ENST00000454398 CMC1Q7Z7K0 106 aa5.49□□□□□ -1.53
HLA-DPA3-207ENST00000454398 YRDCQ86U90 279 aaKnown RBP5.49□□□□□ -1.53
HLA-DPA3-207ENST00000454398 KLHL7Q8IXQ5 586 aa5.49□□□□□ -1.53
HLA-DPA3-207ENST00000454398 KRT78Q8N1N4 520 aa5.49□□□□□ -1.53
HLA-DPA3-207ENST00000454398 SLC35F6Q8N357 371 aa5.49□□□□□ -1.53
HLA-DPA3-207ENST00000454398 LRRC25Q8N386 305 aaPredicted RBP5.49□□□□□ -1.53
HLA-DPA3-207ENST00000454398 MORN4Q8NDC4 146 aa5.49□□□□□ -1.53
HLA-DPA3-207ENST00000454398 SIMC1Q8NDZ2 872 aa5.49□□□□□ -1.53
HLA-DPA3-207ENST00000454398 MYRIPQ8NFW9 859 aa5.49□□□□□ -1.53
HLA-DPA3-207ENST00000454398 RDH11Q8TC12 318 aa5.49□□□□□ -1.53
HLA-DPA3-207ENST00000454398 SLC22A8Q8TCC7 542 aa5.49□□□□□ -1.53
HLA-DPA3-207ENST00000454398 PAQR8Q8TEZ7 354 aa5.49□□□□□ -1.53
HLA-DPA3-207ENST00000454398 SLC44A1Q8WWI5 657 aa5.49□□□□□ -1.53
HLA-DPA3-207ENST00000454398 DIO2Q92813 273 aa5.49□□□□□ -1.53
HLA-DPA3-207ENST00000454398 SENP5Q96HI0 755 aaPredicted RBP5.49□□□□□ -1.53
HLA-DPA3-207ENST00000454398 FBXL20Q96IG2 436 aa5.49□□□□□ -1.53
HLA-DPA3-207ENST00000454398 RILPQ96NA2 401 aa5.49□□□□□ -1.53
HLA-DPA3-207ENST00000454398 GNRHR2Q96P88 292 aa5.49□□□□□ -1.53
HLA-DPA3-207ENST00000454398 KCNC2Q96PR1 638 aa5.49□□□□□ -1.53
HLA-DPA3-207ENST00000454398 OSBPL9Q96SU4 736 aa5.49□□□□□ -1.53
HLA-DPA3-207ENST00000454398 KRT12Q99456 494 aa5.49□□□□□ -1.53
HLA-DPA3-207ENST00000454398 MTERF1Q99551 399 aaKnown RBP5.49□□□□□ -1.53
HLA-DPA3-207ENST00000454398 YIPF4Q9BSR8 244 aa5.49□□□□□ -1.53
HLA-DPA3-207ENST00000454398 REPIN1Q9BWE0 567 aaKnown RBP5.49□□□□□ -1.53
HLA-DPA3-207ENST00000454398 MS4A8Q9BY19 250 aa5.49□□□□□ -1.53
HLA-DPA3-207ENST00000454398 EPB41L4BQ9H329 900 aa5.49□□□□□ -1.53
HLA-DPA3-207ENST00000454398 ALG9Q9H6U8 611 aa5.49□□□□□ -1.53
HLA-DPA3-207ENST00000454398 ZNF395Q9H8N7 513 aaPredicted RBP5.49□□□□□ -1.53
HLA-DPA3-207ENST00000454398 PLEKHF2Q9H8W4 249 aa5.49□□□□□ -1.53
HLA-DPA3-207ENST00000454398 GALNT9Q9HCQ5 603 aa5.49□□□□□ -1.53
HLA-DPA3-207ENST00000454398 ZFP64Q9NPA5 681 aa5.49□□□□□ -1.53
HLA-DPA3-207ENST00000454398 PRDM7Q9NQW5 492 aa5.49□□□□□ -1.53
HLA-DPA3-207ENST00000454398 GALNT8Q9NY28 637 aa5.49□□□□□ -1.53
HLA-DPA3-207ENST00000454398 CD274Q9NZQ7 290 aa5.49□□□□□ -1.53
HLA-DPA3-207ENST00000454398 C6orf203Q9P0P8 240 aaPredicted RBP5.49□□□□□ -1.53
HLA-DPA3-207ENST00000454398 B4GALT7Q9UBV7 327 aa5.49□□□□□ -1.53
HLA-DPA3-207ENST00000454398 VTI1BQ9UEU0 232 aa5.49□□□□□ -1.53
HLA-DPA3-207ENST00000454398 DTX4Q9Y2E6 619 aa5.49□□□□□ -1.53
HLA-DPA3-207ENST00000454398 PPP2R2CQ9Y2T4 447 aa5.49□□□□□ -1.53
HLA-DPA3-207ENST00000454398 A0A088AWK7 358 aa5.48□□□□□ -1.53
HLA-DPA3-207ENST00000454398 GOLGA6L10A0A0M3HER8 536 aa5.48□□□□□ -1.53
HLA-DPA3-207ENST00000454398 HSPB2A8KAH6 182 aa5.48□□□□□ -1.53
HLA-DPA3-207ENST00000454398 GOLGA6L6A8MZA4 724 aa5.48□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms