RNA–Protein interactions for RNA: ENST00000445667.6

USE1-202, Transcript of unconventional SNARE in the ER 1, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene USE1, Length 795 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-202ENST00000445667 OR10H2O60403 315 aa13.69□□□□□ -0.22
USE1-202ENST00000445667 PLIN3O60664 434 aa13.69□□□□□ -0.22
USE1-202ENST00000445667 ZNF354AO60765 605 aaPredicted RBP13.69□□□□□ -0.22
USE1-202ENST00000445667 OR6B1O95007 311 aa13.69□□□□□ -0.22
USE1-202ENST00000445667 MLYCDO95822 493 aa13.69□□□□□ -0.22
USE1-202ENST00000445667 KRT6AP02538 564 aa13.69□□□□□ -0.22
USE1-202ENST00000445667 KRT6BP04259 564 aa13.69□□□□□ -0.22
USE1-202ENST00000445667 STSP08842 583 aa13.69□□□□□ -0.22
USE1-202ENST00000445667 HMOX2P30519 316 aa13.69□□□□□ -0.22
USE1-202ENST00000445667 CRHR1P34998 444 aa13.69□□□□□ -0.22
USE1-202ENST00000445667 SOX3P41225 446 aa13.69□□□□□ -0.22
USE1-202ENST00000445667 CCT5P48643 541 aa13.69□□□□□ -0.22
USE1-202ENST00000445667 KRT6CP48668 564 aa13.69□□□□□ -0.22
USE1-202ENST00000445667 HTR6P50406 440 aa13.69□□□□□ -0.22
USE1-202ENST00000445667 MAPK12P53778 367 aa13.69□□□□□ -0.22
USE1-202ENST00000445667 TBL3Q12788 808 aaKnown RBP13.69□□□□□ -0.22
USE1-202ENST00000445667 ZNF267Q14586 743 aaPredicted RBP13.69□□□□□ -0.22
USE1-202ENST00000445667 C4orf17Q53FE4 359 aa13.69□□□□□ -0.22
USE1-202ENST00000445667 RNFT1Q5M7Z0 435 aa13.69□□□□□ -0.22
USE1-202ENST00000445667 NDUFAF5Q5TEU4 345 aa13.69□□□□□ -0.22
USE1-202ENST00000445667 C1QL3Q5VWW1 255 aa13.69□□□□□ -0.22
USE1-202ENST00000445667 HIST2H2BCQ6DN03 193 aa13.69□□□□□ -0.22
USE1-202ENST00000445667 ZYG11AQ6WRX3 759 aa13.69□□□□□ -0.22
USE1-202ENST00000445667 COMMD6Q7Z4G1 85 aa13.69□□□□□ -0.22
USE1-202ENST00000445667 SULF2Q8IWU5 870 aa13.69□□□□□ -0.22
USE1-202ENST00000445667 ST13P4Q8IZP2 240 aaPredicted RBP13.69□□□□□ -0.22
USE1-202ENST00000445667 C4orf33Q8N1A6 199 aa13.69□□□□□ -0.22
USE1-202ENST00000445667 C1orf52Q8N6N3 182 aaKnown RBP13.69□□□□□ -0.22
USE1-202ENST00000445667 FAM98AQ8NCA5 519 aaKnown RBP13.69□□□□□ -0.22
USE1-202ENST00000445667 C7orf57Q8NEG2 295 aa13.69□□□□□ -0.22
USE1-202ENST00000445667 OR8K3Q8NH51 312 aa13.69□□□□□ -0.22
USE1-202ENST00000445667 ASB15Q8WXK1 588 aa13.69□□□□□ -0.22
USE1-202ENST00000445667 KCNA7Q96RP8 456 aa13.69□□□□□ -0.22
USE1-202ENST00000445667 RASL10BQ96S79 203 aa13.69□□□□□ -0.22
USE1-202ENST00000445667 GSTO2Q9H4Y5 243 aa13.69□□□□□ -0.22
USE1-202ENST00000445667 BRF2Q9HAW0 419 aa13.69□□□□□ -0.22
USE1-202ENST00000445667 VPS29Q9UBQ0 182 aa13.69□□□□□ -0.22
USE1-202ENST00000445667 COPS7AQ9UBW8 275 aa13.69□□□□□ -0.22
USE1-202ENST00000445667 GRID1Q9ULK0 1009 aa13.69□□□□□ -0.22
USE1-202ENST00000445667 NPIPA1Q9UND3 350 aa13.69□□□□□ -0.22
USE1-202ENST00000445667 ERVK-11Q9UQG0 969 aa13.69□□□□□ -0.22
USE1-202ENST00000445667 A8MVJ9 347 aa13.68□□□□□ -0.22
USE1-202ENST00000445667 COPEO14579 308 aa13.68□□□□□ -0.22
USE1-202ENST00000445667 DYRK3O43781 588 aa13.68□□□□□ -0.22
USE1-202ENST00000445667 PEX1O43933 1283 aa13.68□□□□□ -0.22
USE1-202ENST00000445667 CDH16O75309 829 aa13.68□□□□□ -0.22
USE1-202ENST00000445667 ULK1O75385 1050 aa13.68□□□□□ -0.22
USE1-202ENST00000445667 SLU7O95391 586 aaKnown RBP13.68□□□□□ -0.22
USE1-202ENST00000445667 IGKV3-11P04433 115 aa13.68□□□□□ -0.22
USE1-202ENST00000445667 GP1BBP13224 206 aa13.68□□□□□ -0.22
USE1-202ENST00000445667 KRT4P19013 534 aa13.68□□□□□ -0.22
USE1-202ENST00000445667 PIK3R1P27986 724 aa13.68□□□□□ -0.22
USE1-202ENST00000445667 RFC3P40938 356 aa13.68□□□□□ -0.22
USE1-202ENST00000445667 MEOX1P50221 254 aa13.68□□□□□ -0.22
USE1-202ENST00000445667 NAGLUP54802 743 aa13.68□□□□□ -0.22
USE1-202ENST00000445667 GPR85P60893 370 aa13.68□□□□□ -0.22
USE1-202ENST00000445667 ERVK-8P63133 956 aa13.68□□□□□ -0.22
USE1-202ENST00000445667 LCP2Q13094 533 aa13.68□□□□□ -0.22
USE1-202ENST00000445667 ZNF750Q32MQ0 723 aa13.68□□□□□ -0.22
USE1-202ENST00000445667 CCDC153Q494R4 210 aa13.68□□□□□ -0.22
USE1-202ENST00000445667 OR52E8Q6IFG1 317 aa13.68□□□□□ -0.22
USE1-202ENST00000445667 SCIMPQ6UWF3 145 aa13.68□□□□□ -0.22
USE1-202ENST00000445667 FJX1Q86VR8 437 aa13.68□□□□□ -0.22
USE1-202ENST00000445667 C9orf40Q8IXQ3 194 aa13.68□□□□□ -0.22
USE1-202ENST00000445667 MMP21Q8N119 569 aa13.68□□□□□ -0.22
USE1-202ENST00000445667 CCDC63Q8NA47 563 aa13.68□□□□□ -0.22
USE1-202ENST00000445667 OR5L2Q8NGL0 311 aa13.68□□□□□ -0.22
USE1-202ENST00000445667 RIT1Q92963 219 aa13.68□□□□□ -0.22
USE1-202ENST00000445667 TM4SF18Q96CE8 201 aa13.68□□□□□ -0.22
USE1-202ENST00000445667 FBXL20Q96IG2 436 aa13.68□□□□□ -0.22
USE1-202ENST00000445667 GPR137Q96N19 417 aa13.68□□□□□ -0.22
USE1-202ENST00000445667 MID1IP1Q9NPA3 183 aa13.68□□□□□ -0.22
USE1-202ENST00000445667 HPF1Q9NWY4 346 aa13.68□□□□□ -0.22
USE1-202ENST00000445667 ERVK-19Q9WJR5 959 aa13.68□□□□□ -0.22
USE1-202ENST00000445667 KLF13Q9Y2Y9 288 aaPredicted RBP13.68□□□□□ -0.22
USE1-202ENST00000445667 USP9XQ93008 2570 aaPredicted RBP13.68□□□□□ -0.22
USE1-202ENST00000445667 KLRC4-KLRK1H3BQV0 150 aa13.67□□□□□ -0.22
USE1-202ENST00000445667 UBFD1O14562 309 aaKnown RBP13.67□□□□□ -0.22
USE1-202ENST00000445667 ZNHIT1O43257 154 aa13.67□□□□□ -0.22
USE1-202ENST00000445667 ASNA1O43681 348 aa13.67□□□□□ -0.22
USE1-202ENST00000445667 ESRRBO95718 433 aa13.67□□□□□ -0.22
USE1-202ENST00000445667 SLC35E2P0CK97 266 aa13.67□□□□□ -0.22
USE1-202ENST00000445667 CPA3P15088 417 aa13.67□□□□□ -0.22
USE1-202ENST00000445667 XKP51811 444 aa13.67□□□□□ -0.22
USE1-202ENST00000445667 FOXA1P55317 472 aa13.67□□□□□ -0.22
USE1-202ENST00000445667 PKNOX1P55347 436 aa13.67□□□□□ -0.22
USE1-202ENST00000445667 HMGCS1Q01581 520 aa13.67□□□□□ -0.22
USE1-202ENST00000445667 SLC18A2Q05940 514 aa13.67□□□□□ -0.22
USE1-202ENST00000445667 ASPHQ12797 758 aa13.67□□□□□ -0.22
USE1-202ENST00000445667 SIAH3Q8IW03 269 aa13.67□□□□□ -0.22
USE1-202ENST00000445667 OR4K14Q8NGD5 310 aa13.67□□□□□ -0.22
USE1-202ENST00000445667 AGAP11Q8TF27 550 aa13.67□□□□□ -0.22
USE1-202ENST00000445667 CHTF18Q8WVB6 975 aa13.67□□□□□ -0.22
USE1-202ENST00000445667 CCDC126Q96EE4 140 aa13.67□□□□□ -0.22
USE1-202ENST00000445667 ART5Q96L15 291 aa13.67□□□□□ -0.22
USE1-202ENST00000445667 PELOQ9BRX2 385 aaKnown RBP13.67□□□□□ -0.22
USE1-202ENST00000445667 TIMMDC1Q9NPL8 285 aa13.67□□□□□ -0.22
USE1-202ENST00000445667 DEPPQ9NTK1 212 aa13.67□□□□□ -0.22
USE1-202ENST00000445667 NMRK1Q9NWW6 199 aa13.67□□□□□ -0.22
USE1-202ENST00000445667 PLEKHB1Q9UF11 243 aaPredicted RBP13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms