RNA–Protein interactions for RNA: ENST00000428868.1

SMC6-204, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 4

Gene SMC6, Length 544 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-204ENST00000428868 NDUFA9Q16795 377 aa8.35□□□□□ -1.07
SMC6-204ENST00000428868 SAMD4BQ5PRF9 694 aaKnown RBP8.35□□□□□ -1.07
SMC6-204ENST00000428868 DDX59Q5T1V6 619 aaKnown RBP eCLIP8.35□□□□□ -1.07
SMC6-204ENST00000428868 STPG1Q5TH74 334 aa8.35□□□□□ -1.07
SMC6-204ENST00000428868 C1orf146Q5VVC0 180 aa8.35□□□□□ -1.07
SMC6-204ENST00000428868 GARNL3Q5VVW2 1013 aa8.35□□□□□ -1.07
SMC6-204ENST00000428868 OR52E8Q6IFG1 317 aa8.35□□□□□ -1.07
SMC6-204ENST00000428868 PWWP2BQ6NUJ5 590 aa8.35□□□□□ -1.07
SMC6-204ENST00000428868 CYP2R1Q6VVX0 501 aa8.35□□□□□ -1.07
SMC6-204ENST00000428868 COX15Q7KZN9 410 aa8.35□□□□□ -1.07
SMC6-204ENST00000428868 NET1Q7Z628 596 aaPredicted RBP8.35□□□□□ -1.07
SMC6-204ENST00000428868 PIP4P1Q86T03 277 aa8.35□□□□□ -1.07
SMC6-204ENST00000428868 CALHM3Q86XJ0 350 aa8.35□□□□□ -1.07
SMC6-204ENST00000428868 ARHGAP24Q8N264 748 aa8.35□□□□□ -1.07
SMC6-204ENST00000428868 AMER2Q8N7J2 671 aa8.35□□□□□ -1.07
SMC6-204ENST00000428868 DEFB124Q8NES8 71 aa8.35□□□□□ -1.07
SMC6-204ENST00000428868 ADCY4Q8NFM4 1077 aa8.35□□□□□ -1.07
SMC6-204ENST00000428868 OR8J3Q8NGG0 315 aa8.35□□□□□ -1.07
SMC6-204ENST00000428868 OR9A2Q8NGT5 310 aa8.35□□□□□ -1.07
SMC6-204ENST00000428868 OR10A6Q8NH74 314 aa8.35□□□□□ -1.07
SMC6-204ENST00000428868 OR5P2Q8WZ92 322 aa8.35□□□□□ -1.07
SMC6-204ENST00000428868 KAT2AQ92830 837 aa8.35□□□□□ -1.07
SMC6-204ENST00000428868 ANKRD9Q96BM1 317 aaPredicted RBP8.35□□□□□ -1.07
SMC6-204ENST00000428868 GBP5Q96PP8 586 aa8.35□□□□□ -1.07
SMC6-204ENST00000428868 BBS4Q96RK4 519 aa8.35□□□□□ -1.07
SMC6-204ENST00000428868 DPH2Q9BQC3 489 aaPredicted RBP8.35□□□□□ -1.07
SMC6-204ENST00000428868 SLC35A5Q9BS91 424 aa8.35□□□□□ -1.07
SMC6-204ENST00000428868 NPLQ9BXD5 320 aaPredicted RBP8.35□□□□□ -1.07
SMC6-204ENST00000428868 CHST8Q9H2A9 424 aa8.35□□□□□ -1.07
SMC6-204ENST00000428868 ALG2Q9H553 416 aa8.35□□□□□ -1.07
SMC6-204ENST00000428868 RPF2Q9H7B2 306 aaKnown RBP8.35□□□□□ -1.07
SMC6-204ENST00000428868 KAT8Q9H7Z6 458 aaKnown RBP8.35□□□□□ -1.07
SMC6-204ENST00000428868 TPT1P8Q9HAU6 139 aa8.35□□□□□ -1.07
SMC6-204ENST00000428868 SLC22A11Q9NSA0 550 aa8.35□□□□□ -1.07
SMC6-204ENST00000428868 TAS2R9Q9NYW1 312 aa8.35□□□□□ -1.07
SMC6-204ENST00000428868 EHD3Q9NZN3 535 aa8.35□□□□□ -1.07
SMC6-204ENST00000428868 SUCOQ9UBS9 1254 aaKnown RBP8.35□□□□□ -1.07
SMC6-204ENST00000428868 VPS4AQ9UN37 437 aa8.35□□□□□ -1.07
SMC6-204ENST00000428868 L3MBTL1Q9Y468 752 aa8.35□□□□□ -1.07
SMC6-204ENST00000428868 FAM186AA6NE01 2351 aa8.35□□□□□ -1.07
SMC6-204ENST00000428868 C15orf38-AP3S2A0A0A6YYH1 394 aa8.34□□□□□ -1.07
SMC6-204ENST00000428868 RNF103-CHMP3A0A140T963 221 aa8.34□□□□□ -1.07
SMC6-204ENST00000428868 A0A1W2PNU3 283 aaPredicted RBP8.34□□□□□ -1.07
SMC6-204ENST00000428868 CLIC1O00299 241 aa8.34□□□□□ -1.07
SMC6-204ENST00000428868 ARPC2O15144 300 aa8.34□□□□□ -1.07
SMC6-204ENST00000428868 LRP3O75074 770 aa8.34□□□□□ -1.07
SMC6-204ENST00000428868 GUCY1B2O75343 617 aa8.34□□□□□ -1.07
SMC6-204ENST00000428868 RFPL3O75679 317 aa8.34□□□□□ -1.07
SMC6-204ENST00000428868 CIB2O75838 187 aa8.34□□□□□ -1.07
SMC6-204ENST00000428868 CT62P0C5K7 136 aa8.34□□□□□ -1.07
SMC6-204ENST00000428868 ZCCHC18P0CG32 403 aa8.34□□□□□ -1.07
SMC6-204ENST00000428868 RNH1P13489 461 aaKnown RBP8.34□□□□□ -1.07
SMC6-204ENST00000428868 ETFAP13804 333 aa8.34□□□□□ -1.07
SMC6-204ENST00000428868 ZNF28P17035 718 aa8.34□□□□□ -1.07
SMC6-204ENST00000428868 ITIH1P19827 911 aa8.34□□□□□ -1.07
SMC6-204ENST00000428868 ALAS2P22557 587 aa8.34□□□□□ -1.07
SMC6-204ENST00000428868 NTSP30990 170 aa8.34□□□□□ -1.07
SMC6-204ENST00000428868 MC3RP41968 323 aa8.34□□□□□ -1.07
SMC6-204ENST00000428868 XCR1P46094 333 aa8.34□□□□□ -1.07
SMC6-204ENST00000428868 AVPR1BP47901 424 aa8.34□□□□□ -1.07
SMC6-204ENST00000428868 EMP3P54852 163 aa8.34□□□□□ -1.07
SMC6-204ENST00000428868 MANFP55145 182 aaKnown RBP8.34□□□□□ -1.07
SMC6-204ENST00000428868 MRPS35P82673 323 aaKnown RBP8.34□□□□□ -1.07
SMC6-204ENST00000428868 ACY1Q03154 408 aa8.34□□□□□ -1.07
SMC6-204ENST00000428868 SAXO2Q658L1 398 aa8.34□□□□□ -1.07
SMC6-204ENST00000428868 ZNF385CQ66K41 422 aaPredicted RBP8.34□□□□□ -1.07
SMC6-204ENST00000428868 LCN10Q6JVE6 187 aa8.34□□□□□ -1.07
SMC6-204ENST00000428868 TLDC1Q6P9B6 456 aa8.34□□□□□ -1.07
SMC6-204ENST00000428868 CYB5D1Q6P9G0 228 aa8.34□□□□□ -1.07
SMC6-204ENST00000428868 FAM111BQ6SJ93 734 aa8.34□□□□□ -1.07
SMC6-204ENST00000428868 TMEM107Q6UX40 140 aa8.34□□□□□ -1.07
SMC6-204ENST00000428868 ARPINQ7Z6K5 226 aa8.34□□□□□ -1.07
SMC6-204ENST00000428868 GALNT10Q86SR1 603 aa8.34□□□□□ -1.07
SMC6-204ENST00000428868 SLCO6A1Q86UG4 719 aa8.34□□□□□ -1.07
SMC6-204ENST00000428868 PTOV1Q86YD1 416 aa8.34□□□□□ -1.07
SMC6-204ENST00000428868 MARCH9Q86YJ5 346 aa8.34□□□□□ -1.07
SMC6-204ENST00000428868 ZZZ3Q8IYH5 903 aa8.34□□□□□ -1.07
SMC6-204ENST00000428868 OR51Q1Q8NH59 317 aa8.34□□□□□ -1.07
SMC6-204ENST00000428868 PSMA8Q8TAA3 256 aa8.34□□□□□ -1.07
SMC6-204ENST00000428868 FAM120BQ96EK7 910 aaKnown RBP8.34□□□□□ -1.07
SMC6-204ENST00000428868 OTUB1Q96FW1 271 aaPredicted RBP8.34□□□□□ -1.07
SMC6-204ENST00000428868 MAGED4Q96JG8 741 aa8.34□□□□□ -1.07
SMC6-204ENST00000428868 DPYSL5Q9BPU6 564 aa8.34□□□□□ -1.07
SMC6-204ENST00000428868 KCTD14Q9BQ13 255 aaPredicted RBP8.34□□□□□ -1.07
SMC6-204ENST00000428868 THUMPD3Q9BV44 507 aaKnown RBP8.34□□□□□ -1.07
SMC6-204ENST00000428868 AKIRIN1Q9H9L7 192 aaPredicted RBP8.34□□□□□ -1.07
SMC6-204ENST00000428868 FANCEQ9HB96 536 aa8.34□□□□□ -1.07
SMC6-204ENST00000428868 LANCL2Q9NS86 450 aa8.34□□□□□ -1.07
SMC6-204ENST00000428868 ACSS1Q9NUB1 689 aaPredicted RBP8.34□□□□□ -1.07
SMC6-204ENST00000428868 NKX1-2Q9UD57 310 aaPredicted RBP8.34□□□□□ -1.07
SMC6-204ENST00000428868 ZNF282Q9UDV7 671 aaPredicted RBP8.34□□□□□ -1.07
SMC6-204ENST00000428868 CLCA2Q9UQC9 943 aa8.34□□□□□ -1.07
SMC6-204ENST00000428868 ENTPD4Q9Y227 616 aa8.34□□□□□ -1.07
SMC6-204ENST00000428868 SNX8Q9Y5X2 465 aa8.34□□□□□ -1.07
SMC6-204ENST00000428868 PCNX3Q9H6A9 2034 aa8.34□□□□□ -1.07
SMC6-204ENST00000428868 TEX51A0A1B0GUA7 166 aa8.33□□□□□ -1.08
SMC6-204ENST00000428868 LOC105378220A0A1B0GUY1 285 aaPredicted RBP8.33□□□□□ -1.08
SMC6-204ENST00000428868 FAM220BPB1ANY3 271 aa8.33□□□□□ -1.08
SMC6-204ENST00000428868 H0Y3Z8 333 aa8.33□□□□□ -1.08
SMC6-204ENST00000428868 H0YIG0 161 aa8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms