RNA–Protein interactions for RNA: ENST00000428696.6

SGCE-204, Transcript of sarcoglycan epsilon, humanhuman

TSL 1 (best) BASIC

Gene SGCE, Length 1,409 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-204ENST00000428696 A0A1W2PS29 197 aa13.61□□□□□ -0.23
SGCE-204ENST00000428696 SAGE2PA6NJ88 616 aa13.61□□□□□ -0.23
SGCE-204ENST00000428696 TRPC5OSA6NMA1 111 aa13.61□□□□□ -0.23
SGCE-204ENST00000428696 TCP11X1B4DZS4 312 aa13.61□□□□□ -0.23
SGCE-204ENST00000428696 SLCO1B7G3V0H7 640 aa13.61□□□□□ -0.23
SGCE-204ENST00000428696 KLF11O14901 512 aa13.61□□□□□ -0.23
SGCE-204ENST00000428696 HDAC3O15379 428 aa13.61□□□□□ -0.23
SGCE-204ENST00000428696 DIAPH2O60879 1101 aa13.61□□□□□ -0.23
SGCE-204ENST00000428696 ALPPP05187 535 aa13.61□□□□□ -0.23
SGCE-204ENST00000428696 ITGAMP11215 1152 aa13.61□□□□□ -0.23
SGCE-204ENST00000428696 BCKDHAP12694 445 aa13.61□□□□□ -0.23
SGCE-204ENST00000428696 DRD2P14416 443 aa13.61□□□□□ -0.23
SGCE-204ENST00000428696 SDC1P18827 310 aa13.61□□□□□ -0.23
SGCE-204ENST00000428696 MAPK1P28482 360 aa13.61□□□□□ -0.23
SGCE-204ENST00000428696 PTGER1P34995 402 aa13.61□□□□□ -0.23
SGCE-204ENST00000428696 STT3AP46977 705 aa13.61□□□□□ -0.23
SGCE-204ENST00000428696 ST13P50502 369 aaKnown RBP13.61□□□□□ -0.23
SGCE-204ENST00000428696 HK2P52789 917 aa13.61□□□□□ -0.23
SGCE-204ENST00000428696 SLC26A5P58743 744 aa13.61□□□□□ -0.23
SGCE-204ENST00000428696 PLIN5Q00G26 463 aa13.61□□□□□ -0.23
SGCE-204ENST00000428696 ZNF267Q14586 743 aaPredicted RBP13.61□□□□□ -0.23
SGCE-204ENST00000428696 ELAVL1Q15717 326 aaKnown RBP13.61□□□□□ -0.23
SGCE-204ENST00000428696 XKR7Q5GH72 579 aa13.61□□□□□ -0.23
SGCE-204ENST00000428696 C6orf163Q5TEZ5 329 aa13.61□□□□□ -0.23
SGCE-204ENST00000428696 AGAP7PQ5VUJ5 663 aa13.61□□□□□ -0.23
SGCE-204ENST00000428696 PLAG1Q6DJT9 500 aa13.61□□□□□ -0.23
SGCE-204ENST00000428696 ANKRD26P1Q6NSI1 321 aa13.61□□□□□ -0.23
SGCE-204ENST00000428696 SLC48A1Q6P1K1 146 aa13.61□□□□□ -0.23
SGCE-204ENST00000428696 RNF165Q6ZSG1 346 aa13.61□□□□□ -0.23
SGCE-204ENST00000428696 TICAM1Q8IUC6 712 aa13.61□□□□□ -0.23
SGCE-204ENST00000428696 KIF2BQ8N4N8 673 aa13.61□□□□□ -0.23
SGCE-204ENST00000428696 BRIX1Q8TDN6 353 aaKnown RBP13.61□□□□□ -0.23
SGCE-204ENST00000428696 RIT1Q92963 219 aa13.61□□□□□ -0.23
SGCE-204ENST00000428696 MAGEB18Q96M61 343 aa13.61□□□□□ -0.23
SGCE-204ENST00000428696 AGAP4Q96P64 663 aa13.61□□□□□ -0.23
SGCE-204ENST00000428696 BBS4Q96RK4 519 aa13.61□□□□□ -0.23
SGCE-204ENST00000428696 UBL7Q96S82 380 aaPredicted RBP13.61□□□□□ -0.23
SGCE-204ENST00000428696 NUDT9Q9BW91 350 aa13.61□□□□□ -0.23
SGCE-204ENST00000428696 GIMAP4Q9NUV9 329 aa13.61□□□□□ -0.23
SGCE-204ENST00000428696 TMED5Q9Y3A6 229 aa13.61□□□□□ -0.23
SGCE-204ENST00000428696 TRBV11-1A0A0K0K1C0 115 aa13.6□□□□□ -0.23
SGCE-204ENST00000428696 EIF4E1BA6NMX2 242 aaKnown RBP13.6□□□□□ -0.23
SGCE-204ENST00000428696 PORP16435 677 aaPredicted RBP13.6□□□□□ -0.23
SGCE-204ENST00000428696 CSNK2A2P19784 350 aaPredicted RBP13.6□□□□□ -0.23
SGCE-204ENST00000428696 PRPH2P23942 346 aa13.6□□□□□ -0.23
SGCE-204ENST00000428696 EPHA3P29320 983 aa13.6□□□□□ -0.23
SGCE-204ENST00000428696 AP2B1P63010 937 aa13.6□□□□□ -0.23
SGCE-204ENST00000428696 BIKQ13323 160 aa13.6□□□□□ -0.23
SGCE-204ENST00000428696 MYBPC3Q14896 1274 aa13.6□□□□□ -0.23
SGCE-204ENST00000428696 B3GNTL1Q67FW5 361 aaPredicted RBP13.6□□□□□ -0.23
SGCE-204ENST00000428696 ASB18Q6ZVZ8 466 aa13.6□□□□□ -0.23
SGCE-204ENST00000428696 CCDC116Q8IYX3 515 aa13.6□□□□□ -0.23
SGCE-204ENST00000428696 M1APQ8TC57 530 aa13.6□□□□□ -0.23
SGCE-204ENST00000428696 PIWIL2Q8TC59 973 aaKnown RBP13.6□□□□□ -0.23
SGCE-204ENST00000428696 PTPMT1Q8WUK0 201 aaPredicted RBP13.6□□□□□ -0.23
SGCE-204ENST00000428696 C11orf24Q96F05 449 aaPredicted RBP13.6□□□□□ -0.23
SGCE-204ENST00000428696 METTL2AQ96IZ6 378 aaKnown RBP13.6□□□□□ -0.23
SGCE-204ENST00000428696 DEFB126Q9BYW3 111 aa13.6□□□□□ -0.23
SGCE-204ENST00000428696 BRINP2Q9C0B6 783 aa13.6□□□□□ -0.23
SGCE-204ENST00000428696 MYNNQ9NPC7 610 aa13.6□□□□□ -0.23
SGCE-204ENST00000428696 SIRT5Q9NXA8 310 aa13.6□□□□□ -0.23
SGCE-204ENST00000428696 SH3BP4Q9P0V3 963 aa13.6□□□□□ -0.23
SGCE-204ENST00000428696 COPS7AQ9UBW8 275 aa13.6□□□□□ -0.23
SGCE-204ENST00000428696 HAO1Q9UJM8 370 aa13.6□□□□□ -0.23
SGCE-204ENST00000428696 ENTPD4Q9Y227 616 aa13.6□□□□□ -0.23
SGCE-204ENST00000428696 TP53TG5Q9Y2B4 290 aa13.6□□□□□ -0.23
SGCE-204ENST00000428696 PIEZO2Q9H5I5 2752 aa13.6□□□□□ -0.23
SGCE-204ENST00000428696 K7EM74 188 aa13.59□□□□□ -0.23
SGCE-204ENST00000428696 VPS4BO75351 444 aa13.59□□□□□ -0.23
SGCE-204ENST00000428696 F10P00742 488 aa13.59□□□□□ -0.23
SGCE-204ENST00000428696 VIMP08670 466 aaKnown RBP13.59□□□□□ -0.23
SGCE-204ENST00000428696 SLC35E2P0CK97 266 aa13.59□□□□□ -0.23
SGCE-204ENST00000428696 SFTPCP11686 197 aa13.59□□□□□ -0.23
SGCE-204ENST00000428696 CPMP14384 443 aa13.59□□□□□ -0.23
SGCE-204ENST00000428696 LBPP18428 481 aa13.59□□□□□ -0.23
SGCE-204ENST00000428696 DDCP20711 480 aa13.59□□□□□ -0.23
SGCE-204ENST00000428696 NME5P56597 212 aa13.59□□□□□ -0.23
SGCE-204ENST00000428696 GUCY1A3Q02108 690 aa13.59□□□□□ -0.23
SGCE-204ENST00000428696 SF3A3Q12874 501 aaKnown RBP eCLIP13.59□□□□□ -0.23
SGCE-204ENST00000428696 MAD2L1Q13257 205 aaPredicted RBP13.59□□□□□ -0.23
SGCE-204ENST00000428696 DGAT2L6Q6ZPD8 337 aa13.59□□□□□ -0.23
SGCE-204ENST00000428696 PTRH1Q86Y79 214 aaKnown RBP13.59□□□□□ -0.23
SGCE-204ENST00000428696 ST13P4Q8IZP2 240 aaPredicted RBP13.59□□□□□ -0.23
SGCE-204ENST00000428696 C7orf57Q8NEG2 295 aa13.59□□□□□ -0.23
SGCE-204ENST00000428696 B3GNT7Q8NFL0 401 aa13.59□□□□□ -0.23
SGCE-204ENST00000428696 ADCY4Q8NFM4 1077 aa13.59□□□□□ -0.23
SGCE-204ENST00000428696 OR14A16Q8NHC5 309 aa13.59□□□□□ -0.23
SGCE-204ENST00000428696 NCLNQ969V3 563 aa13.59□□□□□ -0.23
SGCE-204ENST00000428696 SENP5Q96HI0 755 aaPredicted RBP13.59□□□□□ -0.23
SGCE-204ENST00000428696 PELOQ9BRX2 385 aaKnown RBP13.59□□□□□ -0.23
SGCE-204ENST00000428696 MFRPQ9BY79 579 aa13.59□□□□□ -0.23
SGCE-204ENST00000428696 LIN28AQ9H9Z2 209 aaKnown RBP13.59□□□□□ -0.23
SGCE-204ENST00000428696 SLC35C2Q9NQQ7 365 aa13.59□□□□□ -0.23
SGCE-204ENST00000428696 STMN3Q9NZ72 180 aa13.59□□□□□ -0.23
SGCE-204ENST00000428696 CLDN16Q9Y5I7 305 aa13.59□□□□□ -0.23
SGCE-204ENST00000428696 PCSK5Q92824 1860 aa13.59□□□□□ -0.23
SGCE-204ENST00000428696 SYNDIG1LA6NDD5 238 aa13.58□□□□□ -0.24
SGCE-204ENST00000428696 KLHL41O60662 606 aa13.58□□□□□ -0.24
SGCE-204ENST00000428696 G6PDP11413 515 aa13.58□□□□□ -0.24
SGCE-204ENST00000428696 MPIP34949 423 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms