RNA–Protein interactions for RNA: ENST00000419582.5

PTPA-213, Transcript of protein phosphatase 2 phosphatase activator, human

TSL 1 (best) BASIC

Gene PTPA, Length 952 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTPA-213	ENST00000419582	PTMA	P06454	111 aa	Known RBP	13.72	□□□□□ -0.21
PTPA-213	ENST00000419582	HPD	P32754	393 aa	Predicted RBP	13.72	□□□□□ -0.21
PTPA-213	ENST00000419582	RGS4	P49798	205 aa		13.72	□□□□□ -0.21
PTPA-213	ENST00000419582	NR1H2	P55055	460 aa		13.72	□□□□□ -0.21
PTPA-213	ENST00000419582	IGLV3-21	P80748	117 aa	Predicted RBP	13.72	□□□□□ -0.21
PTPA-213	ENST00000419582	CDK16	Q00536	496 aa		13.72	□□□□□ -0.21
PTPA-213	ENST00000419582	VEZF1	Q14119	521 aa		13.72	□□□□□ -0.21
PTPA-213	ENST00000419582	UGT3A1	Q6NUS8	523 aa		13.72	□□□□□ -0.21
PTPA-213	ENST00000419582	NXPE4	Q6UWF7	544 aa		13.72	□□□□□ -0.21
PTPA-213	ENST00000419582	CES3	Q6UWW8	571 aa		13.72	□□□□□ -0.21
PTPA-213	ENST00000419582	C4orf22	Q6V702	233 aa		13.72	□□□□□ -0.21
PTPA-213	ENST00000419582	ZC3HAV1	Q7Z2W4	902 aa	Known RBP	13.72	□□□□□ -0.21
PTPA-213	ENST00000419582	BTLA	Q7Z6A9	289 aa		13.72	□□□□□ -0.21
PTPA-213	ENST00000419582	CLNK	Q7Z7G1	428 aa		13.72	□□□□□ -0.21
PTPA-213	ENST00000419582	LMNTD2	Q8IXW0	634 aa		13.72	□□□□□ -0.21
PTPA-213	ENST00000419582	KLHDC8A	Q8IYD2	350 aa		13.72	□□□□□ -0.21
PTPA-213	ENST00000419582	FAM47B	Q8NA70	645 aa		13.72	□□□□□ -0.21
PTPA-213	ENST00000419582	FAM13C	Q8NE31	585 aa		13.72	□□□□□ -0.21
PTPA-213	ENST00000419582	EEF1AKMT1	Q8WVE0	214 aa		13.72	□□□□□ -0.21
PTPA-213	ENST00000419582	FBXL8	Q96CD0	374 aa		13.72	□□□□□ -0.21
PTPA-213	ENST00000419582	STARD4	Q96DR4	205 aa		13.72	□□□□□ -0.21
PTPA-213	ENST00000419582	GNRHR2	Q96P88	292 aa		13.72	□□□□□ -0.21
PTPA-213	ENST00000419582	TSGA10	Q9BZW7	698 aa		13.72	□□□□□ -0.21
PTPA-213	ENST00000419582	SDAD1	Q9NVU7	687 aa	Known RBP eCLIP	13.72	□□□□□ -0.21
PTPA-213	ENST00000419582	WWOX	Q9NZC7	414 aa		13.72	□□□□□ -0.21
PTPA-213	ENST00000419582	CLCF1	Q9UBD9	225 aa		13.72	□□□□□ -0.21
PTPA-213	ENST00000419582	LPAR3	Q9UBY5	353 aa		13.72	□□□□□ -0.21
PTPA-213	ENST00000419582	MAD1L1	Q9Y6D9	718 aa		13.72	□□□□□ -0.21
PTPA-213	ENST00000419582	CR1	P17927	2039 aa		13.72	□□□□□ -0.21
PTPA-213	ENST00000419582	HEATR5A	Q86XA9	2040 aa		13.72	□□□□□ -0.21
PTPA-213	ENST00000419582		A0A1W2PNV4	684 aa		13.71	□□□□□ -0.21
PTPA-213	ENST00000419582	TCRBV7S2A1N4T	A0A589	114 aa		13.71	□□□□□ -0.21
PTPA-213	ENST00000419582	C16orf97	H3BN30	126 aa		13.71	□□□□□ -0.21
PTPA-213	ENST00000419582	TP53I11	O14683	189 aa		13.71	□□□□□ -0.21
PTPA-213	ENST00000419582	KLF4	O43474	513 aa		13.71	□□□□□ -0.21
PTPA-213	ENST00000419582	LIAS	O43766	372 aa		13.71	□□□□□ -0.21
PTPA-213	ENST00000419582	CDH16	O75309	829 aa		13.71	□□□□□ -0.21
PTPA-213	ENST00000419582	IFNB1	P01574	187 aa		13.71	□□□□□ -0.21
PTPA-213	ENST00000419582	TPM1	P09493	284 aa		13.71	□□□□□ -0.21
PTPA-213	ENST00000419582	GMPR	P36959	345 aa		13.71	□□□□□ -0.21
PTPA-213	ENST00000419582	MTTP	P55157	894 aa		13.71	□□□□□ -0.21
PTPA-213	ENST00000419582	FUT7	Q11130	342 aa		13.71	□□□□□ -0.21
PTPA-213	ENST00000419582	BEX5	Q5H9J7	111 aa		13.71	□□□□□ -0.21
PTPA-213	ENST00000419582	ZNF474	Q6S9Z5	364 aa	Predicted RBP	13.71	□□□□□ -0.21
PTPA-213	ENST00000419582	PACS2	Q86VP3	889 aa		13.71	□□□□□ -0.21
PTPA-213	ENST00000419582	SPNS2	Q8IVW8	549 aa		13.71	□□□□□ -0.21
PTPA-213	ENST00000419582	LRRC57	Q8N9N7	239 aa		13.71	□□□□□ -0.21
PTPA-213	ENST00000419582	OR2L5	Q8NG80	312 aa		13.71	□□□□□ -0.21
PTPA-213	ENST00000419582	SREK1	Q8WXA9	508 aa	Known RBP	13.71	□□□□□ -0.21
PTPA-213	ENST00000419582	ANKRD7	Q92527	254 aa		13.71	□□□□□ -0.21
PTPA-213	ENST00000419582	CTHRC1	Q96CG8	243 aa		13.71	□□□□□ -0.21
PTPA-213	ENST00000419582	TRMT61A	Q96FX7	289 aa	Known RBP	13.71	□□□□□ -0.21
PTPA-213	ENST00000419582	TMEM41A	Q96HV5	264 aa		13.71	□□□□□ -0.21
PTPA-213	ENST00000419582	ART5	Q96L15	291 aa		13.71	□□□□□ -0.21
PTPA-213	ENST00000419582	PIGQ	Q9BRB3	760 aa		13.71	□□□□□ -0.21
PTPA-213	ENST00000419582	SLC39A3	Q9BRY0	314 aa		13.71	□□□□□ -0.21
PTPA-213	ENST00000419582	TMEM204	Q9BSN7	226 aa		13.71	□□□□□ -0.21
PTPA-213	ENST00000419582	G6PC3	Q9BUM1	346 aa		13.71	□□□□□ -0.21
PTPA-213	ENST00000419582	LRTM1	Q9HBL6	345 aa		13.71	□□□□□ -0.21
PTPA-213	ENST00000419582	LYRM4	Q9HD34	91 aa		13.71	□□□□□ -0.21
PTPA-213	ENST00000419582	SYBU	Q9NX95	663 aa		13.71	□□□□□ -0.21
PTPA-213	ENST00000419582	ARL15	Q9NXU5	204 aa		13.71	□□□□□ -0.21
PTPA-213	ENST00000419582	MED12L	Q86YW9	2145 aa		13.7	□□□□□ -0.22
PTPA-213	ENST00000419582	CTAGE9	A4FU28	777 aa		13.7	□□□□□ -0.22
PTPA-213	ENST00000419582	CAPN14	A8MX76	684 aa		13.7	□□□□□ -0.22
PTPA-213	ENST00000419582	GOLGA6L19	H0YKK7	550 aa		13.7	□□□□□ -0.22
PTPA-213	ENST00000419582	HS3ST1	O14792	307 aa		13.7	□□□□□ -0.22
PTPA-213	ENST00000419582	SNPH	O15079	494 aa		13.7	□□□□□ -0.22
PTPA-213	ENST00000419582	ERI3	O43414	337 aa	Known RBP	13.7	□□□□□ -0.22
PTPA-213	ENST00000419582	SPRY1	O43609	319 aa	Predicted RBP	13.7	□□□□□ -0.22
PTPA-213	ENST00000419582	COX7A2	P14406	83 aa		13.7	□□□□□ -0.22
PTPA-213	ENST00000419582	MGAT1	P26572	445 aa		13.7	□□□□□ -0.22
PTPA-213	ENST00000419582	HNRNPH1	P31943	449 aa	Known RBP	13.7	□□□□□ -0.22
PTPA-213	ENST00000419582	CCKAR	P32238	428 aa		13.7	□□□□□ -0.22
PTPA-213	ENST00000419582	TIAL1	Q01085	375 aa	Known RBP eCLIP	13.7	□□□□□ -0.22
PTPA-213	ENST00000419582	RBBP5	Q15291	538 aa	Known RBP	13.7	□□□□□ -0.22
PTPA-213	ENST00000419582	EIPR1	Q53HC9	387 aa		13.7	□□□□□ -0.22
PTPA-213	ENST00000419582	C6orf52	Q5T4I8	152 aa		13.7	□□□□□ -0.22
PTPA-213	ENST00000419582	TIGD3	Q6B0B8	471 aa		13.7	□□□□□ -0.22
PTPA-213	ENST00000419582	ZNF470	Q6ECI4	717 aa		13.7	□□□□□ -0.22
PTPA-213	ENST00000419582	DIO2	Q92813	273 aa		13.7	□□□□□ -0.22
PTPA-213	ENST00000419582	ANKRD9	Q96BM1	317 aa	Predicted RBP	13.7	□□□□□ -0.22
PTPA-213	ENST00000419582	FBXL20	Q96IG2	436 aa		13.7	□□□□□ -0.22
PTPA-213	ENST00000419582	RILP	Q96NA2	401 aa		13.7	□□□□□ -0.22
PTPA-213	ENST00000419582	RUNDC3B	Q96NL0	473 aa		13.7	□□□□□ -0.22
PTPA-213	ENST00000419582	CSF3R	Q99062	836 aa		13.7	□□□□□ -0.22
PTPA-213	ENST00000419582	BEX2	Q9BXY8	128 aa		13.7	□□□□□ -0.22
PTPA-213	ENST00000419582	PITHD1	Q9GZP4	211 aa	Predicted RBP	13.7	□□□□□ -0.22
PTPA-213	ENST00000419582	NT5DC2	Q9H857	520 aa		13.7	□□□□□ -0.22
PTPA-213	ENST00000419582	PTBP2	Q9UKA9	531 aa	Known RBP	13.7	□□□□□ -0.22
PTPA-213	ENST00000419582	WIF1	Q9Y5W5	379 aa		13.7	□□□□□ -0.22
PTPA-213	ENST00000419582	KCNE2	Q9Y6J6	123 aa		13.7	□□□□□ -0.22
PTPA-213	ENST00000419582	MAGEB16	A2A368	324 aa		13.69	□□□□□ -0.22
PTPA-213	ENST00000419582	MIF4GD	A9UHW6	222 aa	Known RBP	13.69	□□□□□ -0.22
PTPA-213	ENST00000419582	DYRK3	O43781	588 aa		13.69	□□□□□ -0.22
PTPA-213	ENST00000419582	CLEC3A	O75596	197 aa		13.69	□□□□□ -0.22
PTPA-213	ENST00000419582	TBX6	O95947	436 aa	Predicted RBP	13.69	□□□□□ -0.22
PTPA-213	ENST00000419582	ETS1	P14921	441 aa		13.69	□□□□□ -0.22
PTPA-213	ENST00000419582	SAT1	P21673	171 aa		13.69	□□□□□ -0.22
PTPA-213	ENST00000419582	PTPN6	P29350	595 aa		13.69	□□□□□ -0.22

Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms