RNA–Protein interactions for RNA: ENST00000413582.6

RFFL-203, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 5 BASIC

Gene RFFL, Length 1,217 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-203ENST00000413582 ERI3O43414 337 aaKnown RBP8.79□□□□□ -1
RFFL-203ENST00000413582 EPPINO95925 133 aa8.79□□□□□ -1
RFFL-203ENST00000413582 HIST1H2AGP0C0S8 130 aaPredicted RBP8.79□□□□□ -1
RFFL-203ENST00000413582 PGAM1P18669 254 aa8.79□□□□□ -1
RFFL-203ENST00000413582 HIST1H2ADP20671 130 aa8.79□□□□□ -1
RFFL-203ENST00000413582 HNRNPH1P31943 449 aaKnown RBP8.79□□□□□ -1
RFFL-203ENST00000413582 TIMP3P35625 211 aa8.79□□□□□ -1
RFFL-203ENST00000413582 HSD17B3P37058 310 aa8.79□□□□□ -1
RFFL-203ENST00000413582 ELK3P41970 407 aa8.79□□□□□ -1
RFFL-203ENST00000413582 STXBP1P61764 594 aaKnown RBP8.79□□□□□ -1
RFFL-203ENST00000413582 RNF4P78317 190 aa8.79□□□□□ -1
RFFL-203ENST00000413582 ILF2Q12905 390 aaKnown RBP8.79□□□□□ -1
RFFL-203ENST00000413582 CRYMQ14894 314 aa8.79□□□□□ -1
RFFL-203ENST00000413582 FASTKD3Q14CZ7 662 aaKnown RBP8.79□□□□□ -1
RFFL-203ENST00000413582 POU4F3Q15319 338 aa8.79□□□□□ -1
RFFL-203ENST00000413582 ZNF791Q3KP31 576 aaPredicted RBP8.79□□□□□ -1
RFFL-203ENST00000413582 SPANXN3Q5MJ09 141 aa8.79□□□□□ -1
RFFL-203ENST00000413582 STEAP4Q687X5 459 aa8.79□□□□□ -1
RFFL-203ENST00000413582 LACC1Q8IV20 430 aa8.79□□□□□ -1
RFFL-203ENST00000413582 LMNTD2Q8IXW0 634 aa8.79□□□□□ -1
RFFL-203ENST00000413582 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP8.79□□□□□ -1
RFFL-203ENST00000413582 ZNF595Q8IYB9 648 aa8.79□□□□□ -1
RFFL-203ENST00000413582 LRRC25Q8N386 305 aaPredicted RBP8.79□□□□□ -1
RFFL-203ENST00000413582 MORN4Q8NDC4 146 aa8.79□□□□□ -1
RFFL-203ENST00000413582 FBXO36Q8NEA4 188 aa8.79□□□□□ -1
RFFL-203ENST00000413582 SLC2A12Q8TD20 617 aa8.79□□□□□ -1
RFFL-203ENST00000413582 CALML6Q8TD86 181 aa8.79□□□□□ -1
RFFL-203ENST00000413582 UBLCP1Q8WVY7 318 aaPredicted RBP8.79□□□□□ -1
RFFL-203ENST00000413582 ATL1Q8WXF7 558 aa8.79□□□□□ -1
RFFL-203ENST00000413582 KIAA1191Q96A73 305 aa8.79□□□□□ -1
RFFL-203ENST00000413582 HIST1H2AHQ96KK5 128 aa8.79□□□□□ -1
RFFL-203ENST00000413582 QRFPRQ96P65 431 aa8.79□□□□□ -1
RFFL-203ENST00000413582 HIST1H2AJQ99878 128 aa8.79□□□□□ -1
RFFL-203ENST00000413582 YIPF4Q9BSR8 244 aa8.79□□□□□ -1
RFFL-203ENST00000413582 H2AFJQ9BTM1 129 aa8.79□□□□□ -1
RFFL-203ENST00000413582 TMEM109Q9BVC6 243 aa8.79□□□□□ -1
RFFL-203ENST00000413582 NPLQ9BXD5 320 aaPredicted RBP8.79□□□□□ -1
RFFL-203ENST00000413582 ROPN1BQ9BZX4 212 aaPredicted RBP8.79□□□□□ -1
RFFL-203ENST00000413582 OR8D2Q9GZM6 311 aa8.79□□□□□ -1
RFFL-203ENST00000413582 ROPN1Q9HAT0 212 aaPredicted RBP8.79□□□□□ -1
RFFL-203ENST00000413582 ZFP64Q9NPA5 681 aa8.79□□□□□ -1
RFFL-203ENST00000413582 ACKR4Q9NPB9 350 aa8.79□□□□□ -1
RFFL-203ENST00000413582 C20orf96Q9NUD7 363 aaPredicted RBP8.79□□□□□ -1
RFFL-203ENST00000413582 TAS2R13Q9NYV9 303 aa8.79□□□□□ -1
RFFL-203ENST00000413582 NINJ2Q9NZG7 142 aa8.79□□□□□ -1
RFFL-203ENST00000413582 BOKQ9UMX3 212 aaPredicted RBP8.79□□□□□ -1
RFFL-203ENST00000413582 CHMP2BQ9UQN3 213 aa8.79□□□□□ -1
RFFL-203ENST00000413582 MRPS33Q9Y291 106 aaKnown RBP8.79□□□□□ -1
RFFL-203ENST00000413582 DSCAMO60469 2012 aa8.78□□□□□ -1
RFFL-203ENST00000413582 MYOCOSA0A1B0GUC4 107 aa8.78□□□□□ -1
RFFL-203ENST00000413582 AHRRA9YTQ3 701 aa8.78□□□□□ -1
RFFL-203ENST00000413582 EEF1E1-BLOC1S5C9J1V9 151 aa8.78□□□□□ -1
RFFL-203ENST00000413582 INAFM1C9JVW0 142 aa8.78□□□□□ -1
RFFL-203ENST00000413582 ARHGEF9O43307 516 aa8.78□□□□□ -1
RFFL-203ENST00000413582 EEF1E1O43324 174 aaKnown RBP8.78□□□□□ -1
RFFL-203ENST00000413582 GUCA1CO95843 209 aa8.78□□□□□ -1
RFFL-203ENST00000413582 IFNA16P05015 189 aa8.78□□□□□ -1
RFFL-203ENST00000413582 SAT1P21673 171 aa8.78□□□□□ -1
RFFL-203ENST00000413582 TRPC1P48995 793 aa8.78□□□□□ -1
RFFL-203ENST00000413582 CDKN2DP55273 166 aa8.78□□□□□ -1
RFFL-203ENST00000413582 KCNJ2P63252 427 aa8.78□□□□□ -1
RFFL-203ENST00000413582 CRYZQ08257 329 aaKnown RBP8.78□□□□□ -1
RFFL-203ENST00000413582 SLC29A2Q14542 456 aa8.78□□□□□ -1
RFFL-203ENST00000413582 RASA2Q15283 850 aa8.78□□□□□ -1
RFFL-203ENST00000413582 RBBP5Q15291 538 aaKnown RBP8.78□□□□□ -1
RFFL-203ENST00000413582 UAP1Q16222 522 aaPredicted RBP8.78□□□□□ -1
RFFL-203ENST00000413582 MPEG1Q2M385 716 aa8.78□□□□□ -1
RFFL-203ENST00000413582 HP1BP3Q5SSJ5 553 aaPredicted RBP8.78□□□□□ -1
RFFL-203ENST00000413582 RBM20Q5T481 1227 aaKnown RBP8.78□□□□□ -1
RFFL-203ENST00000413582 PRAMEF20Q5VT98 475 aa8.78□□□□□ -1
RFFL-203ENST00000413582 NXPE4Q6UWF7 544 aa8.78□□□□□ -1
RFFL-203ENST00000413582 LYPD8Q6UX82 237 aa8.78□□□□□ -1
RFFL-203ENST00000413582 C3orf62Q6ZUJ4 267 aa8.78□□□□□ -1
RFFL-203ENST00000413582 KLHDC8AQ8IYD2 350 aa8.78□□□□□ -1
RFFL-203ENST00000413582 LRRC75A-AS1Q8N1F1 130 aa8.78□□□□□ -1
RFFL-203ENST00000413582 SIMC1Q8NDZ2 872 aa8.78□□□□□ -1
RFFL-203ENST00000413582 OR5L2Q8NGL0 311 aa8.78□□□□□ -1
RFFL-203ENST00000413582 GABPB2Q8TAK5 448 aaPredicted RBP8.78□□□□□ -1
RFFL-203ENST00000413582 PAQR8Q8TEZ7 354 aa8.78□□□□□ -1
RFFL-203ENST00000413582 MS4A6EQ96DS6 147 aa8.78□□□□□ -1
RFFL-203ENST00000413582 HSPBAP1Q96EW2 488 aa8.78□□□□□ -1
RFFL-203ENST00000413582 FAR2Q96K12 515 aa8.78□□□□□ -1
RFFL-203ENST00000413582 Q96MF0 132 aa8.78□□□□□ -1
RFFL-203ENST00000413582 FAM167BQ9BTA0 163 aa8.78□□□□□ -1
RFFL-203ENST00000413582 EPB41L4BQ9H329 900 aa8.78□□□□□ -1
RFFL-203ENST00000413582 PROK2Q9HC23 129 aa8.78□□□□□ -1
RFFL-203ENST00000413582 QPCTLQ9NXS2 382 aa8.78□□□□□ -1
RFFL-203ENST00000413582 JKAMPQ9P055 326 aa8.78□□□□□ -1
RFFL-203ENST00000413582 VTI1BQ9UEU0 232 aa8.78□□□□□ -1
RFFL-203ENST00000413582 DYRK1BQ9Y463 629 aa8.78□□□□□ -1
RFFL-203ENST00000413582 MED12LQ86YW9 2145 aa8.78□□□□□ -1
RFFL-203ENST00000413582 EXPH5Q8NEV8 1989 aa8.77□□□□□ -1
RFFL-203ENST00000413582 USF3Q68DE3 2245 aa8.77□□□□□ -1.01
RFFL-203ENST00000413582 C15orf38-AP3S2A0A0A6YYH1 394 aa8.77□□□□□ -1.01
RFFL-203ENST00000413582 LRIT2A6NDA9 550 aa8.77□□□□□ -1.01
RFFL-203ENST00000413582 PABPN1LA6NDY0 278 aaKnown RBP8.77□□□□□ -1.01
RFFL-203ENST00000413582 C17orf105B2RV13 164 aa8.77□□□□□ -1.01
RFFL-203ENST00000413582 SMAD7O15105 426 aaKnown RBP8.77□□□□□ -1.01
RFFL-203ENST00000413582 B3GALT2O43825 422 aa8.77□□□□□ -1.01
RFFL-203ENST00000413582 TBX6O95947 436 aaPredicted RBP8.77□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms