RNA–Protein interactions for RNA: ENST00000400555.7

PPP4R1-202, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PPP4R1, Length 3,885 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-202ENST00000400555 HNRNPA0Q13151 305 aaKnown RBP12.04□□□□□ -0.48
PPP4R1-202ENST00000400555 TBCEQ15813 527 aaPredicted RBP12.04□□□□□ -0.48
PPP4R1-202ENST00000400555 GALNT13Q8IUC8 556 aa12.04□□□□□ -0.48
PPP4R1-202ENST00000400555 GHDCQ8N2G8 530 aa12.04□□□□□ -0.48
PPP4R1-202ENST00000400555 KLHL6Q8WZ60 621 aa12.04□□□□□ -0.48
PPP4R1-202ENST00000400555 OR8D1Q8WZ84 308 aa12.04□□□□□ -0.48
PPP4R1-202ENST00000400555 MTERF3Q96E29 417 aa12.04□□□□□ -0.48
PPP4R1-202ENST00000400555 PAWRQ96IZ0 340 aaKnown RBP12.04□□□□□ -0.48
PPP4R1-202ENST00000400555 LRR1Q96L50 414 aa12.04□□□□□ -0.48
PPP4R1-202ENST00000400555 SLC23A2Q9UGH3 650 aa12.04□□□□□ -0.48
PPP4R1-202ENST00000400555 OSGIN1Q9UJX0 560 aa12.04□□□□□ -0.48
PPP4R1-202ENST00000400555 PADI2Q9Y2J8 665 aa12.04□□□□□ -0.48
PPP4R1-202ENST00000400555 IGLON5A6NGN9 336 aa12.04□□□□□ -0.48
PPP4R1-202ENST00000400555 CLDN24A6NM45 220 aa12.04□□□□□ -0.48
PPP4R1-202ENST00000400555 TAF4O00268 1085 aa12.04□□□□□ -0.48
PPP4R1-202ENST00000400555 DDX5P17844 614 aaKnown RBP12.04□□□□□ -0.48
PPP4R1-202ENST00000400555 WDR5P61964 334 aaKnown RBP12.04□□□□□ -0.48
PPP4R1-202ENST00000400555 CSNK2BP67870 215 aa12.04□□□□□ -0.48
PPP4R1-202ENST00000400555 KCNC3Q14003 757 aa12.04□□□□□ -0.48
PPP4R1-202ENST00000400555 HEPACAMQ14CZ8 416 aa12.04□□□□□ -0.48
PPP4R1-202ENST00000400555 ARHGEF6Q15052 776 aa12.04□□□□□ -0.48
PPP4R1-202ENST00000400555 LAX1Q8IWV1 398 aa12.04□□□□□ -0.48
PPP4R1-202ENST00000400555 TMEM145Q8NBT3 493 aa12.04□□□□□ -0.48
PPP4R1-202ENST00000400555 TM9SF2Q99805 663 aa12.04□□□□□ -0.48
PPP4R1-202ENST00000400555 TTYH2Q9BSA4 534 aa12.04□□□□□ -0.48
PPP4R1-202ENST00000400555 BRF2Q9HAW0 419 aa12.04□□□□□ -0.48
PPP4R1-202ENST00000400555 CNIH4Q9P003 139 aa12.04□□□□□ -0.48
PPP4R1-202ENST00000400555 A0A1B0GVC2 190 aa12.04□□□□□ -0.48
PPP4R1-202ENST00000400555 A6NIN4 97 aa12.04□□□□□ -0.48
PPP4R1-202ENST00000400555 OR52A4PA6NMU1 304 aa12.04□□□□□ -0.48
PPP4R1-202ENST00000400555 TNFRSF21O75509 655 aa12.04□□□□□ -0.48
PPP4R1-202ENST00000400555 KCNK2O95069 426 aa12.04□□□□□ -0.48
PPP4R1-202ENST00000400555 ADH5P11766 374 aa12.04□□□□□ -0.48
PPP4R1-202ENST00000400555 RPS19P39019 145 aaKnown RBP12.04□□□□□ -0.48
PPP4R1-202ENST00000400555 TAS2R41P59536 307 aa12.04□□□□□ -0.48
PPP4R1-202ENST00000400555 ID2Q02363 134 aa12.04□□□□□ -0.48
PPP4R1-202ENST00000400555 MSANTD1Q6ZTZ1 278 aa12.04□□□□□ -0.48
PPP4R1-202ENST00000400555 GDPD3Q7L5L3 318 aa12.04□□□□□ -0.48
PPP4R1-202ENST00000400555 OR8K5Q8NH50 307 aa12.04□□□□□ -0.48
PPP4R1-202ENST00000400555 POF1BQ8WVV4 589 aa12.04□□□□□ -0.48
PPP4R1-202ENST00000400555 ZNF689Q96CS4 500 aaPredicted RBP12.04□□□□□ -0.48
PPP4R1-202ENST00000400555 GFM1Q96RP9 751 aaKnown RBP12.04□□□□□ -0.48
PPP4R1-202ENST00000400555 ZNF607Q96SK3 696 aa12.04□□□□□ -0.48
PPP4R1-202ENST00000400555 TTTY10Q9BZA0 68 aa12.04□□□□□ -0.48
PPP4R1-202ENST00000400555 RACGAP1Q9H0H5 632 aa12.04□□□□□ -0.48
PPP4R1-202ENST00000400555 GABARAPL1Q9H0R8 117 aa12.04□□□□□ -0.48
PPP4R1-202ENST00000400555 OR51I1Q9H343 314 aa12.04□□□□□ -0.48
PPP4R1-202ENST00000400555 MVB12BQ9H7P6 319 aa12.04□□□□□ -0.48
PPP4R1-202ENST00000400555 SLAMF7Q9NQ25 335 aa12.04□□□□□ -0.48
PPP4R1-202ENST00000400555 PCYT1BQ9Y5K3 369 aaPredicted RBP12.04□□□□□ -0.48
PPP4R1-202ENST00000400555 IRAK3Q9Y616 596 aa12.04□□□□□ -0.48
PPP4R1-202ENST00000400555 PRRT4C9JH25 899 aa12.03□□□□□ -0.48
PPP4R1-202ENST00000400555 EIF3FO00303 357 aaPredicted RBP12.03□□□□□ -0.48
PPP4R1-202ENST00000400555 ERI3O43414 337 aaKnown RBP12.03□□□□□ -0.48
PPP4R1-202ENST00000400555 CTSAP10619 480 aa12.03□□□□□ -0.48
PPP4R1-202ENST00000400555 SPTBP11277 2137 aa12.03□□□□□ -0.48
PPP4R1-202ENST00000400555 RHCEP18577 417 aa12.03□□□□□ -0.48
PPP4R1-202ENST00000400555 ITGB8P26012 769 aa12.03□□□□□ -0.48
PPP4R1-202ENST00000400555 RPS7P62081 194 aaKnown RBP12.03□□□□□ -0.48
PPP4R1-202ENST00000400555 PUM1Q14671 1186 aaKnown RBP eCLIP12.03□□□□□ -0.48
PPP4R1-202ENST00000400555 NCF4Q15080 339 aa12.03□□□□□ -0.48
PPP4R1-202ENST00000400555 PLAG1Q6DJT9 500 aa12.03□□□□□ -0.48
PPP4R1-202ENST00000400555 LACC1Q8IV20 430 aa12.03□□□□□ -0.48
PPP4R1-202ENST00000400555 COQ8BQ96D53 544 aa12.03□□□□□ -0.48
PPP4R1-202ENST00000400555 TMED9Q9BVK6 235 aa12.03□□□□□ -0.48
PPP4R1-202ENST00000400555 FBXO8Q9NRD0 319 aa12.03□□□□□ -0.48
PPP4R1-202ENST00000400555 CXXC1Q9P0U4 656 aaPredicted RBP12.03□□□□□ -0.48
PPP4R1-202ENST00000400555 ATP6V1HQ9UI12 483 aa12.03□□□□□ -0.48
PPP4R1-202ENST00000400555 TMA7Q9Y2S6 64 aaKnown RBP12.03□□□□□ -0.48
PPP4R1-202ENST00000400555 SCN4AP35499 1836 aa12.03□□□□□ -0.48
PPP4R1-202ENST00000400555 SAGE2PA6NJ88 616 aa12.03□□□□□ -0.48
PPP4R1-202ENST00000400555 PLPP1O14494 284 aa12.03□□□□□ -0.48
PPP4R1-202ENST00000400555 UGDHO60701 494 aa12.03□□□□□ -0.48
PPP4R1-202ENST00000400555 OLFM2O95897 454 aa12.03□□□□□ -0.48
PPP4R1-202ENST00000400555 EIF2S1P05198 315 aaKnown RBP12.03□□□□□ -0.48
PPP4R1-202ENST00000400555 CEBPBP17676 345 aa12.03□□□□□ -0.48
PPP4R1-202ENST00000400555 CD83Q01151 205 aa12.03□□□□□ -0.48
PPP4R1-202ENST00000400555 AGAP7PQ5VUJ5 663 aa12.03□□□□□ -0.48
PPP4R1-202ENST00000400555 DGLUCYQ7Z3D6 616 aa12.03□□□□□ -0.48
PPP4R1-202ENST00000400555 KRT73Q86Y46 540 aa12.03□□□□□ -0.48
PPP4R1-202ENST00000400555 DENND6BQ8NEG7 585 aa12.03□□□□□ -0.48
PPP4R1-202ENST00000400555 RELTQ969Z4 430 aa12.03□□□□□ -0.48
PPP4R1-202ENST00000400555 ARRDC3Q96B67 414 aa12.03□□□□□ -0.48
PPP4R1-202ENST00000400555 SLC35G5Q96KT7 338 aa12.03□□□□□ -0.48
PPP4R1-202ENST00000400555 NECTIN4Q96NY8 510 aa12.03□□□□□ -0.48
PPP4R1-202ENST00000400555 IGFLR1Q9H665 355 aa12.03□□□□□ -0.48
PPP4R1-202ENST00000400555 TBC1D14Q9P2M4 693 aa12.03□□□□□ -0.48
PPP4R1-202ENST00000400555 CFL2Q9Y281 166 aa12.03□□□□□ -0.48
PPP4R1-202ENST00000400555 NAALAD2Q9Y3Q0 740 aa12.03□□□□□ -0.48
PPP4R1-202ENST00000400555 PCDHGB1Q9Y5G3 927 aa12.03□□□□□ -0.48
PPP4R1-202ENST00000400555 ISM1B1AKI9 464 aa12.03□□□□□ -0.48
PPP4R1-202ENST00000400555 CASKO14936 926 aa12.03□□□□□ -0.48
PPP4R1-202ENST00000400555 TSC22D2O75157 780 aa12.03□□□□□ -0.48
PPP4R1-202ENST00000400555 PRNPP04156 253 aa12.03□□□□□ -0.48
PPP4R1-202ENST00000400555 HSD3B1P14060 373 aa12.03□□□□□ -0.48
PPP4R1-202ENST00000400555 HOXB6P17509 224 aaKnown RBP12.03□□□□□ -0.48
PPP4R1-202ENST00000400555 IL1RNP18510 177 aa12.03□□□□□ -0.48
PPP4R1-202ENST00000400555 HSD3B2P26439 372 aa12.03□□□□□ -0.48
PPP4R1-202ENST00000400555 IRS1P35568 1242 aa12.03□□□□□ -0.48
PPP4R1-202ENST00000400555 MMP12P39900 470 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms