RNA–Protein interactions for RNA: ENST00000397443.6

CPNE1-204, Transcript of copine 1, humanhuman

APPRIS P1 TSL 5

Gene CPNE1, Length 1,928 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-204ENST00000397443 MAGED4Q96JG8 741 aa19.93■□□□□ 0.78
CPNE1-204ENST00000397443 AMDHD1Q96NU7 426 aa19.93■□□□□ 0.78
CPNE1-204ENST00000397443 THUMPD3Q9BV44 507 aaKnown RBP19.93■□□□□ 0.78
CPNE1-204ENST00000397443 TMEM121BQ9BXQ6 578 aaPredicted RBP19.93■□□□□ 0.78
CPNE1-204ENST00000397443 FBXO8Q9NRD0 319 aa19.93■□□□□ 0.78
CPNE1-204ENST00000397443 TAS2R9Q9NYW1 312 aa19.93■□□□□ 0.78
CPNE1-204ENST00000397443 ACSL6Q9UKU0 697 aa19.93■□□□□ 0.78
CPNE1-204ENST00000397443 MAP4K5Q9Y4K4 846 aa19.93■□□□□ 0.78
CPNE1-204ENST00000397443 FAM149AA5PLN7 773 aa19.92■□□□□ 0.78
CPNE1-204ENST00000397443 FHP07954 510 aa19.92■□□□□ 0.78
CPNE1-204ENST00000397443 CSNK2A2P19784 350 aaPredicted RBP19.92■□□□□ 0.78
CPNE1-204ENST00000397443 GPC1P35052 558 aa19.92■□□□□ 0.78
CPNE1-204ENST00000397443 CDK9P50750 372 aaKnown RBP19.92■□□□□ 0.78
CPNE1-204ENST00000397443 NOVA1P51513 510 aaKnown RBP19.92■□□□□ 0.78
CPNE1-204ENST00000397443 FOXL2P58012 376 aa19.92■□□□□ 0.78
CPNE1-204ENST00000397443 DMTNQ08495 405 aa19.92■□□□□ 0.78
CPNE1-204ENST00000397443 ABHD18Q0P651 414 aa19.92■□□□□ 0.78
CPNE1-204ENST00000397443 MINDY4Q4G0A6 757 aa19.92■□□□□ 0.78
CPNE1-204ENST00000397443 VWA2Q5GFL6 755 aa19.92■□□□□ 0.78
CPNE1-204ENST00000397443 LRIF1Q5T3J3 769 aa19.92■□□□□ 0.78
CPNE1-204ENST00000397443 ANGPTL8Q6UXH0 198 aa19.92■□□□□ 0.78
CPNE1-204ENST00000397443 SZRD1Q7Z422 152 aa19.92■□□□□ 0.78
CPNE1-204ENST00000397443 HPS6Q86YV9 775 aa19.92■□□□□ 0.78
CPNE1-204ENST00000397443 ULK2Q8IYT8 1036 aa19.92■□□□□ 0.78
CPNE1-204ENST00000397443 ADCY4Q8NFM4 1077 aa19.92■□□□□ 0.78
CPNE1-204ENST00000397443 ANKRD27Q96NW4 1050 aa19.92■□□□□ 0.78
CPNE1-204ENST00000397443 ULBP3Q9BZM4 244 aa19.92■□□□□ 0.78
CPNE1-204ENST00000397443 IKZF5Q9H5V7 419 aa19.92■□□□□ 0.78
CPNE1-204ENST00000397443 CMTM6Q9NX76 183 aa19.92■□□□□ 0.78
CPNE1-204ENST00000397443 VPS4AQ9UN37 437 aa19.92■□□□□ 0.78
CPNE1-204ENST00000397443 MRPS33Q9Y291 106 aaKnown RBP19.92■□□□□ 0.78
CPNE1-204ENST00000397443 L3MBTL1Q9Y468 752 aa19.92■□□□□ 0.78
CPNE1-204ENST00000397443 PCDHB3Q9Y5E6 796 aa19.92■□□□□ 0.78
CPNE1-204ENST00000397443 B3GALT1Q9Y5Z6 326 aa19.92■□□□□ 0.78
CPNE1-204ENST00000397443 NPPAP01160 153 aa19.92■□□□□ 0.78
CPNE1-204ENST00000397443 MAOAP21397 527 aa19.92■□□□□ 0.78
CPNE1-204ENST00000397443 CASP9P55211 416 aa19.92■□□□□ 0.78
CPNE1-204ENST00000397443 LTB4RQ15722 352 aa19.92■□□□□ 0.78
CPNE1-204ENST00000397443 LARP7Q4G0J3 582 aaKnown RBP eCLIP19.92■□□□□ 0.78
CPNE1-204ENST00000397443 C3orf38Q5JPI3 329 aa19.92■□□□□ 0.78
CPNE1-204ENST00000397443 SHISA6Q6ZSJ9 500 aa19.92■□□□□ 0.78
CPNE1-204ENST00000397443 SCUBE1Q8IWY4 988 aa19.92■□□□□ 0.78
CPNE1-204ENST00000397443 SLC15A3Q8IY34 581 aa19.92■□□□□ 0.78
CPNE1-204ENST00000397443 OR9A2Q8NGT5 310 aa19.92■□□□□ 0.78
CPNE1-204ENST00000397443 SUN3Q8TAQ9 357 aa19.92■□□□□ 0.78
CPNE1-204ENST00000397443 OR5P2Q8WZ92 322 aa19.92■□□□□ 0.78
CPNE1-204ENST00000397443 TANKQ92844 425 aa19.92■□□□□ 0.78
CPNE1-204ENST00000397443 CXorf36Q9H7Y0 433 aa19.92■□□□□ 0.78
CPNE1-204ENST00000397443 PRTFDC1Q9NRG1 225 aa19.92■□□□□ 0.78
CPNE1-204ENST00000397443 CTSFQ9UBX1 484 aa19.92■□□□□ 0.78
CPNE1-204ENST00000397443 MYO1GB0I1T2 1018 aa19.91■□□□□ 0.78
CPNE1-204ENST00000397443 TMX2-CTNND1H3BSU7 103 aa19.91■□□□□ 0.78
CPNE1-204ENST00000397443 NME4O00746 187 aa19.91■□□□□ 0.78
CPNE1-204ENST00000397443 MPIP34949 423 aa19.91■□□□□ 0.78
CPNE1-204ENST00000397443 FRKP42685 505 aaPredicted RBP19.91■□□□□ 0.78
CPNE1-204ENST00000397443 SPDYE7PQ495Y7 208 aa19.91■□□□□ 0.78
CPNE1-204ENST00000397443 NKAIN1Q4KMZ8 207 aa19.91■□□□□ 0.78
CPNE1-204ENST00000397443 BPHLQ86WA6 291 aaPredicted RBP19.91■□□□□ 0.78
CPNE1-204ENST00000397443 IFNEQ86WN2 208 aa19.91■□□□□ 0.78
CPNE1-204ENST00000397443 LRRC25Q8N386 305 aaPredicted RBP19.91■□□□□ 0.78
CPNE1-204ENST00000397443 NATD1Q8N6N6 113 aa19.91■□□□□ 0.78
CPNE1-204ENST00000397443 TMEM125Q96AQ2 219 aa19.91■□□□□ 0.78
CPNE1-204ENST00000397443 ANKRD9Q96BM1 317 aaPredicted RBP19.91■□□□□ 0.78
CPNE1-204ENST00000397443 LIN37Q96GY3 246 aaPredicted RBP19.91■□□□□ 0.78
CPNE1-204ENST00000397443 ZNF681Q96N22 645 aa19.91■□□□□ 0.78
CPNE1-204ENST00000397443 SLC22A11Q9NSA0 550 aa19.91■□□□□ 0.78
CPNE1-204ENST00000397443 TRBV5-3A0A0A0MS03 114 aa19.9■□□□□ 0.78
CPNE1-204ENST00000397443 TEX51A0A1B0GUA7 166 aa19.9■□□□□ 0.78
CPNE1-204ENST00000397443 A0A1W2PNU3 283 aaPredicted RBP19.9■□□□□ 0.78
CPNE1-204ENST00000397443 B4E171 279 aa19.9■□□□□ 0.78
CPNE1-204ENST00000397443 CLDN4O14493 209 aa19.9■□□□□ 0.78
CPNE1-204ENST00000397443 CPNE3O75131 537 aaKnown RBP19.9■□□□□ 0.78
CPNE1-204ENST00000397443 GPR75O95800 540 aa19.9■□□□□ 0.78
CPNE1-204ENST00000397443 CPMP14384 443 aa19.9■□□□□ 0.78
CPNE1-204ENST00000397443 HOXB9P17482 250 aaPredicted RBP19.9■□□□□ 0.78
CPNE1-204ENST00000397443 CSRP1P21291 193 aaKnown RBP19.9■□□□□ 0.78
CPNE1-204ENST00000397443 TSPAN7P41732 249 aa19.9■□□□□ 0.78
CPNE1-204ENST00000397443 LRRC74AQ0VAA2 488 aa19.9■□□□□ 0.78
CPNE1-204ENST00000397443 STX4Q12846 297 aa19.9■□□□□ 0.78
CPNE1-204ENST00000397443 CEACAM7Q14002 265 aa19.9■□□□□ 0.78
CPNE1-204ENST00000397443 RUNDC3AQ59EK9 446 aa19.9■□□□□ 0.78
CPNE1-204ENST00000397443 ZNF595Q8IYB9 648 aa19.9■□□□□ 0.78
CPNE1-204ENST00000397443 ARHGAP24Q8N264 748 aa19.9■□□□□ 0.78
CPNE1-204ENST00000397443 ZFP28Q8NHY6 868 aa19.9■□□□□ 0.78
CPNE1-204ENST00000397443 PPWD1Q96BP3 646 aaKnown RBP19.9■□□□□ 0.78
CPNE1-204ENST00000397443 RAB3IPQ96QF0 476 aaPredicted RBP19.9■□□□□ 0.78
CPNE1-204ENST00000397443 SLC35A5Q9BS91 424 aa19.9■□□□□ 0.78
CPNE1-204ENST00000397443 AKIRIN1Q9H9L7 192 aaPredicted RBP19.9■□□□□ 0.78
CPNE1-204ENST00000397443 CLK4Q9HAZ1 481 aaKnown RBP19.9■□□□□ 0.78
CPNE1-204ENST00000397443 ACSS1Q9NUB1 689 aaPredicted RBP19.9■□□□□ 0.78
CPNE1-204ENST00000397443 TMEM181Q9P2C4 612 aa19.9■□□□□ 0.78
CPNE1-204ENST00000397443 RRP15Q9Y3B9 282 aaKnown RBP19.9■□□□□ 0.78
CPNE1-204ENST00000397443 CFAP73A6NFT4 308 aa19.9■□□□□ 0.78
CPNE1-204ENST00000397443 TGFBR3LH3BV60 316 aa19.9■□□□□ 0.78
CPNE1-204ENST00000397443 HBQ1P09105 142 aa19.9■□□□□ 0.78
CPNE1-204ENST00000397443 PORP16435 677 aaPredicted RBP19.9■□□□□ 0.78
CPNE1-204ENST00000397443 CHI3L1P36222 383 aaPredicted RBP19.9■□□□□ 0.78
CPNE1-204ENST00000397443 DCDP81605 110 aaKnown RBP19.9■□□□□ 0.78
CPNE1-204ENST00000397443 DCAF12Q5T6F0 453 aa19.9■□□□□ 0.78
CPNE1-204ENST00000397443 LCN10Q6JVE6 187 aa19.9■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms