RNA–Protein interactions for RNA: ENST00000394106.6

CMTM4-202, Transcript of CKLF like MARVEL transmembrane domain containing 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CMTM4, Length 1,187 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM4-202ENST00000394106 CCDC63Q8NA47 563 aa28.56■■■□□ 2.16
CMTM4-202ENST00000394106 METTL6Q8TCB7 284 aa28.56■■■□□ 2.16
CMTM4-202ENST00000394106 SENP5Q96HI0 755 aaPredicted RBP28.56■■■□□ 2.16
CMTM4-202ENST00000394106 C12orf65Q9H3J6 166 aaKnown RBP28.56■■■□□ 2.16
CMTM4-202ENST00000394106 GSTO2Q9H4Y5 243 aa28.56■■■□□ 2.16
CMTM4-202ENST00000394106 NMRK1Q9NWW6 199 aa28.56■■■□□ 2.16
CMTM4-202ENST00000394106 SEC14L3Q9UDX4 400 aa28.56■■■□□ 2.16
CMTM4-202ENST00000394106 HIVEP3Q5T1R4 2406 aa28.55■■■□□ 2.16
CMTM4-202ENST00000394106 PGRMC2O15173 223 aa28.55■■■□□ 2.16
CMTM4-202ENST00000394106 UNC5CO95185 931 aa28.55■■■□□ 2.16
CMTM4-202ENST00000394106 MAPK12P53778 367 aa28.55■■■□□ 2.16
CMTM4-202ENST00000394106 RNF4P78317 190 aa28.55■■■□□ 2.16
CMTM4-202ENST00000394106 ST13P4Q8IZP2 240 aaPredicted RBP28.55■■■□□ 2.16
CMTM4-202ENST00000394106 ASB15Q8WXK1 588 aa28.55■■■□□ 2.16
CMTM4-202ENST00000394106 PELOQ9BRX2 385 aaKnown RBP28.55■■■□□ 2.16
CMTM4-202ENST00000394106 ERVK-11Q9UQG0 969 aa28.55■■■□□ 2.16
CMTM4-202ENST00000394106 PTPN13Q12923 2485 aa28.54■■■□□ 2.16
CMTM4-202ENST00000394106 HRKO00198 91 aa28.54■■■□□ 2.16
CMTM4-202ENST00000394106 PLIN3O60664 434 aa28.54■■■□□ 2.16
CMTM4-202ENST00000394106 HK2P52789 917 aa28.54■■■□□ 2.16
CMTM4-202ENST00000394106 PKNOX1P55347 436 aa28.54■■■□□ 2.16
CMTM4-202ENST00000394106 ALDH6A1Q02252 535 aaKnown RBP28.54■■■□□ 2.16
CMTM4-202ENST00000394106 GALNT1Q10472 559 aaPredicted RBP28.54■■■□□ 2.16
CMTM4-202ENST00000394106 TBL3Q12788 808 aaKnown RBP28.54■■■□□ 2.16
CMTM4-202ENST00000394106 NDUFAF5Q5TEU4 345 aa28.54■■■□□ 2.16
CMTM4-202ENST00000394106 OR5L2Q8NGL0 311 aa28.54■■■□□ 2.16
CMTM4-202ENST00000394106 AENQ8WTP8 325 aaKnown RBP28.54■■■□□ 2.16
CMTM4-202ENST00000394106 FRMD6Q96NE9 622 aa28.54■■■□□ 2.16
CMTM4-202ENST00000394106 CNPPD1Q9BV87 410 aa28.54■■■□□ 2.16
CMTM4-202ENST00000394106 TSPAN10Q9H1Z9 355 aaPredicted RBP28.54■■■□□ 2.16
CMTM4-202ENST00000394106 ASPDHA6ND91 283 aa28.53■■■□□ 2.16
CMTM4-202ENST00000394106 A8MVJ9 347 aa28.53■■■□□ 2.16
CMTM4-202ENST00000394106 ULK1O75385 1050 aa28.53■■■□□ 2.16
CMTM4-202ENST00000394106 ENO1P06733 434 aaKnown RBP28.53■■■□□ 2.16
CMTM4-202ENST00000394106 PIK3R1P27986 724 aa28.53■■■□□ 2.16
CMTM4-202ENST00000394106 IFFO1Q0D2I5 559 aa28.53■■■□□ 2.16
CMTM4-202ENST00000394106 C1orf52Q8N6N3 182 aaKnown RBP28.53■■■□□ 2.16
CMTM4-202ENST00000394106 OR8K3Q8NH51 312 aa28.53■■■□□ 2.16
CMTM4-202ENST00000394106 RIT1Q92963 219 aa28.53■■■□□ 2.16
CMTM4-202ENST00000394106 ART5Q96L15 291 aa28.53■■■□□ 2.16
CMTM4-202ENST00000394106 PSMG3-AS1Q96PY0 264 aa28.53■■■□□ 2.16
CMTM4-202ENST00000394106 KCNA7Q96RP8 456 aa28.53■■■□□ 2.16
CMTM4-202ENST00000394106 RASL10BQ96S79 203 aa28.53■■■□□ 2.16
CMTM4-202ENST00000394106 MID1IP1Q9NPA3 183 aa28.53■■■□□ 2.16
CMTM4-202ENST00000394106 HPF1Q9NWY4 346 aa28.53■■■□□ 2.16
CMTM4-202ENST00000394106 VPS29Q9UBQ0 182 aa28.53■■■□□ 2.16
CMTM4-202ENST00000394106 KLF13Q9Y2Y9 288 aaPredicted RBP28.53■■■□□ 2.16
CMTM4-202ENST00000394106 TIMM22Q9Y584 194 aa28.53■■■□□ 2.16
CMTM4-202ENST00000394106 A0A1W2PS29 197 aa28.52■■■□□ 2.16
CMTM4-202ENST00000394106 WISP2O76076 250 aa28.52■■■□□ 2.16
CMTM4-202ENST00000394106 OR6B1O95007 311 aa28.52■■■□□ 2.16
CMTM4-202ENST00000394106 NUDT17P0C025 328 aa28.52■■■□□ 2.16
CMTM4-202ENST00000394106 HSD3B1P14060 373 aa28.52■■■□□ 2.16
CMTM4-202ENST00000394106 CHN1P15882 459 aa28.52■■■□□ 2.16
CMTM4-202ENST00000394106 HSD3B2P26439 372 aa28.52■■■□□ 2.16
CMTM4-202ENST00000394106 SOX3P41225 446 aa28.52■■■□□ 2.16
CMTM4-202ENST00000394106 HTR6P50406 440 aa28.52■■■□□ 2.16
CMTM4-202ENST00000394106 ERVK-8P63133 956 aa28.52■■■□□ 2.16
CMTM4-202ENST00000394106 CSTF3Q12996 717 aaKnown RBP28.52■■■□□ 2.16
CMTM4-202ENST00000394106 ZNF267Q14586 743 aaPredicted RBP28.52■■■□□ 2.16
CMTM4-202ENST00000394106 WDR93Q6P2C0 686 aa28.52■■■□□ 2.16
CMTM4-202ENST00000394106 IL20RBQ6UXL0 311 aa28.52■■■□□ 2.16
CMTM4-202ENST00000394106 MDGA2Q7Z553 956 aa28.52■■■□□ 2.16
CMTM4-202ENST00000394106 CPSF7Q8N684 471 aaKnown RBP28.52■■■□□ 2.16
CMTM4-202ENST00000394106 RDH11Q8TC12 318 aa28.52■■■□□ 2.16
CMTM4-202ENST00000394106 AGAP11Q8TF27 550 aa28.52■■■□□ 2.16
CMTM4-202ENST00000394106 FBXL20Q96IG2 436 aa28.52■■■□□ 2.16
CMTM4-202ENST00000394106 ERVK-19Q9WJR5 959 aa28.52■■■□□ 2.16
CMTM4-202ENST00000394106 LRRTM2O43300 516 aa28.51■■■□□ 2.15
CMTM4-202ENST00000394106 GUCY1B2O75343 617 aa28.51■■■□□ 2.15
CMTM4-202ENST00000394106 ESRRBO95718 433 aa28.51■■■□□ 2.15
CMTM4-202ENST00000394106 IGKV3-11P04433 115 aa28.51■■■□□ 2.15
CMTM4-202ENST00000394106 SLC35E2P0CK97 266 aa28.51■■■□□ 2.15
CMTM4-202ENST00000394106 CPA3P15088 417 aa28.51■■■□□ 2.15
CMTM4-202ENST00000394106 NAGLUP54802 743 aa28.51■■■□□ 2.15
CMTM4-202ENST00000394106 C4orf17Q53FE4 359 aa28.51■■■□□ 2.15
CMTM4-202ENST00000394106 CFAP157Q5JU67 520 aa28.51■■■□□ 2.15
CMTM4-202ENST00000394106 EMBQ6PCB8 327 aa28.51■■■□□ 2.15
CMTM4-202ENST00000394106 OR4K14Q8NGD5 310 aa28.51■■■□□ 2.15
CMTM4-202ENST00000394106 TIMMDC1Q9NPL8 285 aa28.51■■■□□ 2.15
CMTM4-202ENST00000394106 CCDC151A5D8V7 595 aa28.5■■■□□ 2.15
CMTM4-202ENST00000394106 ESPNB1AK53 854 aa28.5■■■□□ 2.15
CMTM4-202ENST00000394106 NPIPA5E9PKD4 350 aa28.5■■■□□ 2.15
CMTM4-202ENST00000394106 UBFD1O14562 309 aaKnown RBP28.5■■■□□ 2.15
CMTM4-202ENST00000394106 MEOX1P50221 254 aa28.5■■■□□ 2.15
CMTM4-202ENST00000394106 SLC18A2Q05940 514 aa28.5■■■□□ 2.15
CMTM4-202ENST00000394106 SPRED3Q2MJR0 410 aa28.5■■■□□ 2.15
CMTM4-202ENST00000394106 SCIMPQ6UWF3 145 aa28.5■■■□□ 2.15
CMTM4-202ENST00000394106 SULF2Q8IWU5 870 aa28.5■■■□□ 2.15
CMTM4-202ENST00000394106 C9orf40Q8IXQ3 194 aa28.5■■■□□ 2.15
CMTM4-202ENST00000394106 GPALPP1Q8IXQ4 340 aa28.5■■■□□ 2.15
CMTM4-202ENST00000394106 ACPTQ9BZG2 426 aa28.5■■■□□ 2.15
CMTM4-202ENST00000394106 NPIPA1Q9UND3 350 aa28.5■■■□□ 2.15
CMTM4-202ENST00000394106 POLEQ07864 2286 aa28.49■■■□□ 2.15
CMTM4-202ENST00000394106 LDLRP01130 860 aa28.49■■■□□ 2.15
CMTM4-202ENST00000394106 GPR85P60893 370 aa28.49■■■□□ 2.15
CMTM4-202ENST00000394106 ASPHQ12797 758 aa28.49■■■□□ 2.15
CMTM4-202ENST00000394106 C1QL3Q5VWW1 255 aa28.49■■■□□ 2.15
CMTM4-202ENST00000394106 FRMD7Q6ZUT3 714 aa28.49■■■□□ 2.15
CMTM4-202ENST00000394106 MMP21Q8N119 569 aa28.49■■■□□ 2.15
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms