RNA–Protein interactions for RNA: ENST00000377349.6

CBWD3-204, Transcript of COBW domain containing 3, humanhuman

TSL 2

Gene CBWD3, Length 1,403 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-204ENST00000377349 FAM166BA8MTA8 275 aa17.73■□□□□ 0.43
CBWD3-204ENST00000377349 SERPINB1P30740 379 aa17.73■□□□□ 0.43
CBWD3-204ENST00000377349 HK2P52789 917 aa17.73■□□□□ 0.43
CBWD3-204ENST00000377349 RPS13P62277 151 aaKnown RBP17.73■□□□□ 0.43
CBWD3-204ENST00000377349 PPIAP62937 165 aaKnown RBP17.73■□□□□ 0.43
CBWD3-204ENST00000377349 OR4C11Q6IEV9 310 aa17.73■□□□□ 0.43
CBWD3-204ENST00000377349 IL20RBQ6UXL0 311 aa17.73■□□□□ 0.43
CBWD3-204ENST00000377349 HSDL2Q6YN16 418 aa17.73■□□□□ 0.43
CBWD3-204ENST00000377349 DMRTC2Q8IXT2 367 aaPredicted RBP17.73■□□□□ 0.43
CBWD3-204ENST00000377349 PLD6Q8N2A8 252 aaKnown RBP17.73■□□□□ 0.43
CBWD3-204ENST00000377349 PTGR2Q8N8N7 351 aaPredicted RBP17.73■□□□□ 0.43
CBWD3-204ENST00000377349 OR14A16Q8NHC5 309 aa17.73■□□□□ 0.43
CBWD3-204ENST00000377349 ASB15Q8WXK1 588 aa17.73■□□□□ 0.43
CBWD3-204ENST00000377349 RND1Q92730 232 aa17.73■□□□□ 0.43
CBWD3-204ENST00000377349 RGMAQ96B86 450 aa17.73■□□□□ 0.43
CBWD3-204ENST00000377349 CDK15Q96Q40 435 aa17.73■□□□□ 0.43
CBWD3-204ENST00000377349 TTTY12Q9BZ98 90 aa17.73■□□□□ 0.43
CBWD3-204ENST00000377349 DMRT3Q9NQL9 472 aa17.73■□□□□ 0.43
CBWD3-204ENST00000377349 PNPLA3Q9NST1 481 aa17.73■□□□□ 0.43
CBWD3-204ENST00000377349 PRKRAO75569 313 aaKnown RBP17.72■□□□□ 0.43
CBWD3-204ENST00000377349 COX7A2P14406 83 aa17.72■□□□□ 0.43
CBWD3-204ENST00000377349 PMPCAQ10713 525 aa17.72■□□□□ 0.43
CBWD3-204ENST00000377349 DOK4Q8TEW6 326 aa17.72■□□□□ 0.43
CBWD3-204ENST00000377349 REPS1Q96D71 796 aa17.72■□□□□ 0.43
CBWD3-204ENST00000377349 DGAT2Q96PD7 388 aa17.72■□□□□ 0.43
CBWD3-204ENST00000377349 XPR1Q9UBH6 696 aa17.72■□□□□ 0.43
CBWD3-204ENST00000377349 COPS7AQ9UBW8 275 aa17.72■□□□□ 0.43
CBWD3-204ENST00000377349 VTI1BQ9UEU0 232 aa17.72■□□□□ 0.43
CBWD3-204ENST00000377349 PCDHGA11Q9Y5H2 935 aa17.72■□□□□ 0.43
CBWD3-204ENST00000377349 MED12Q93074 2177 aa17.72■□□□□ 0.43
CBWD3-204ENST00000377349 NPIPA2E9PIF3 369 aa17.72■□□□□ 0.43
CBWD3-204ENST00000377349 NPIPA3F8WFD2 350 aa17.72■□□□□ 0.43
CBWD3-204ENST00000377349 G3V3Y1 287 aa17.72■□□□□ 0.43
CBWD3-204ENST00000377349 PLPP1O14494 284 aa17.72■□□□□ 0.43
CBWD3-204ENST00000377349 IGHG3P01860 377 aa17.72■□□□□ 0.43
CBWD3-204ENST00000377349 NEK2P51955 445 aa17.72■□□□□ 0.43
CBWD3-204ENST00000377349 FOXO1Q12778 655 aa17.72■□□□□ 0.43
CBWD3-204ENST00000377349 SERTAD2Q14140 314 aa17.72■□□□□ 0.43
CBWD3-204ENST00000377349 ZNF750Q32MQ0 723 aa17.72■□□□□ 0.43
CBWD3-204ENST00000377349 GXYLT1Q4G148 440 aa17.72■□□□□ 0.43
CBWD3-204ENST00000377349 TECRLQ5HYJ1 363 aa17.72■□□□□ 0.43
CBWD3-204ENST00000377349 DEPDC1Q5TB30 811 aa17.72■□□□□ 0.43
CBWD3-204ENST00000377349 LIPJQ5W064 366 aa17.72■□□□□ 0.43
CBWD3-204ENST00000377349 TTC19Q6DKK2 380 aaPredicted RBP17.72■□□□□ 0.43
CBWD3-204ENST00000377349 CYP20A1Q6UW02 462 aa17.72■□□□□ 0.43
CBWD3-204ENST00000377349 MORN4Q8NDC4 146 aa17.72■□□□□ 0.43
CBWD3-204ENST00000377349 SLC2A12Q8TD20 617 aa17.72■□□□□ 0.43
CBWD3-204ENST00000377349 SLC44A1Q8WWI5 657 aa17.72■□□□□ 0.43
CBWD3-204ENST00000377349 PPWD1Q96BP3 646 aaKnown RBP17.72■□□□□ 0.43
CBWD3-204ENST00000377349 TSPYL1Q9H0U9 437 aa17.72■□□□□ 0.43
CBWD3-204ENST00000377349 NOL11Q9H8H0 719 aaKnown RBP17.72■□□□□ 0.43
CBWD3-204ENST00000377349 ADGRE2Q9UHX3 823 aa17.72■□□□□ 0.43
CBWD3-204ENST00000377349 RNF11Q9Y3C5 154 aa17.72■□□□□ 0.43
CBWD3-204ENST00000377349 TNPO3Q9Y5L0 923 aaKnown RBP17.72■□□□□ 0.43
CBWD3-204ENST00000377349 FAM215AQ9Y5M1 114 aa17.72■□□□□ 0.43
CBWD3-204ENST00000377349 A0A1B0GVC2 190 aa17.71■□□□□ 0.43
CBWD3-204ENST00000377349 FGF17O60258 216 aa17.71■□□□□ 0.43
CBWD3-204ENST00000377349 SMIM24O75264 130 aa17.71■□□□□ 0.43
CBWD3-204ENST00000377349 KRT38O76015 456 aa17.71■□□□□ 0.43
CBWD3-204ENST00000377349 HOXD4P09016 255 aaPredicted RBP17.71■□□□□ 0.43
CBWD3-204ENST00000377349 CCNG1P51959 295 aa17.71■□□□□ 0.43
CBWD3-204ENST00000377349 TEX35Q5T0J7 233 aa17.71■□□□□ 0.43
CBWD3-204ENST00000377349 C18orf63Q68DL7 685 aa17.71■□□□□ 0.43
CBWD3-204ENST00000377349 RTL6Q6ICC9 239 aa17.71■□□□□ 0.43
CBWD3-204ENST00000377349 TMEM251Q8N6I4 163 aa17.71■□□□□ 0.43
CBWD3-204ENST00000377349 GPR78Q96P69 363 aa17.71■□□□□ 0.43
CBWD3-204ENST00000377349 RPF2Q9H7B2 306 aaKnown RBP17.71■□□□□ 0.43
CBWD3-204ENST00000377349 KCNJ16Q9NPI9 418 aa17.71■□□□□ 0.43
CBWD3-204ENST00000377349 PHF11Q9UIL8 331 aa17.71■□□□□ 0.43
CBWD3-204ENST00000377349 FLNAP21333 2647 aaKnown RBP17.7■□□□□ 0.42
CBWD3-204ENST00000377349 KIAA1549Q9HCM3 1950 aa17.7■□□□□ 0.42
CBWD3-204ENST00000377349 SYNDIG1LA6NDD5 238 aa17.7■□□□□ 0.42
CBWD3-204ENST00000377349 GLOD5A6NK44 160 aa17.7■□□□□ 0.42
CBWD3-204ENST00000377349 TRIM49D1C9J1S8 452 aa17.7■□□□□ 0.42
CBWD3-204ENST00000377349 DYRK3O43781 588 aa17.7■□□□□ 0.42
CBWD3-204ENST00000377349 GBAP04062 536 aa17.7■□□□□ 0.42
CBWD3-204ENST00000377349 CELA3AP09093 270 aa17.7■□□□□ 0.42
CBWD3-204ENST00000377349 TLX1P31314 330 aaPredicted RBP17.7■□□□□ 0.42
CBWD3-204ENST00000377349 BUD31P41223 144 aaPredicted RBP17.7■□□□□ 0.42
CBWD3-204ENST00000377349 PIK3CBP42338 1070 aa17.7■□□□□ 0.42
CBWD3-204ENST00000377349 SERPINB9P50453 376 aa17.7■□□□□ 0.42
CBWD3-204ENST00000377349 RNF4P78317 190 aa17.7■□□□□ 0.42
CBWD3-204ENST00000377349 TNFRSF17Q02223 184 aa17.7■□□□□ 0.42
CBWD3-204ENST00000377349 PLGLB1Q02325 96 aa17.7■□□□□ 0.42
CBWD3-204ENST00000377349 E2F2Q14209 437 aa17.7■□□□□ 0.42
CBWD3-204ENST00000377349 PCBP2Q15366 365 aaKnown RBP eCLIP17.7■□□□□ 0.42
CBWD3-204ENST00000377349 SGO1Q5FBB7 561 aa17.7■□□□□ 0.42
CBWD3-204ENST00000377349 RGS9BPQ6ZS82 235 aa17.7■□□□□ 0.42
CBWD3-204ENST00000377349 GPR180Q86V85 440 aa17.7■□□□□ 0.42
CBWD3-204ENST00000377349 OR5M9Q8NGP3 310 aa17.7■□□□□ 0.42
CBWD3-204ENST00000377349 OR5M3Q8NGP4 307 aa17.7■□□□□ 0.42
CBWD3-204ENST00000377349 OR8K3Q8NH51 312 aa17.7■□□□□ 0.42
CBWD3-204ENST00000377349 CNPPD1Q9BV87 410 aa17.7■□□□□ 0.42
CBWD3-204ENST00000377349 DOCK7Q96N67 2140 aa17.69■□□□□ 0.42
CBWD3-204ENST00000377349 A0A087WUV0 522 aaPredicted RBP17.69■□□□□ 0.42
CBWD3-204ENST00000377349 EXOC1LA0A1B0GW35 172 aa17.69■□□□□ 0.42
CBWD3-204ENST00000377349 OR14I1A6ND48 311 aa17.69■□□□□ 0.42
CBWD3-204ENST00000377349 FOXO6A8MYZ6 492 aa17.69■□□□□ 0.42
CBWD3-204ENST00000377349 ACOT7O00154 380 aa17.69■□□□□ 0.42
CBWD3-204ENST00000377349 KLK8O60259 260 aa17.69■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms