RNA–Protein interactions for RNA: ENST00000375661.5

LSM2-208, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM2, Length 876 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-208ENST00000375661 OC90Q02509 493 aaPredicted RBP11.35□□□□□ -0.59
LSM2-208ENST00000375661 DDX39BQ13838 428 aaKnown RBP11.35□□□□□ -0.59
LSM2-208ENST00000375661 RCN2Q14257 317 aa11.35□□□□□ -0.59
LSM2-208ENST00000375661 ARL13AQ5H913 290 aaPredicted RBP11.35□□□□□ -0.59
LSM2-208ENST00000375661 TOR1AIP1Q5JTV8 583 aa11.35□□□□□ -0.59
LSM2-208ENST00000375661 FRG2Q64ET8 278 aa11.35□□□□□ -0.59
LSM2-208ENST00000375661 PAPD4Q6PIY7 484 aaKnown RBP11.35□□□□□ -0.59
LSM2-208ENST00000375661 PNPLA5Q7Z6Z6 429 aaPredicted RBP11.35□□□□□ -0.59
LSM2-208ENST00000375661 PDSS2Q86YH6 399 aa11.35□□□□□ -0.59
LSM2-208ENST00000375661 CHERPQ8IWX8 916 aaKnown RBP11.35□□□□□ -0.59
LSM2-208ENST00000375661 SHISA5Q8N114 240 aa11.35□□□□□ -0.59
LSM2-208ENST00000375661 POGLUT1Q8NBL1 392 aa11.35□□□□□ -0.59
LSM2-208ENST00000375661 PLPP5Q8NEB5 264 aa11.35□□□□□ -0.59
LSM2-208ENST00000375661 METTL6Q8TCB7 284 aa11.35□□□□□ -0.59
LSM2-208ENST00000375661 ASB5Q8WWX0 329 aa11.35□□□□□ -0.59
LSM2-208ENST00000375661 REPS1Q96D71 796 aa11.35□□□□□ -0.59
LSM2-208ENST00000375661 MS4A6EQ96DS6 147 aa11.35□□□□□ -0.59
LSM2-208ENST00000375661 FRG2BQ96QU4 278 aa11.35□□□□□ -0.59
LSM2-208ENST00000375661 F2RL3Q96RI0 385 aa11.35□□□□□ -0.59
LSM2-208ENST00000375661 MTERF1Q99551 399 aaKnown RBP11.35□□□□□ -0.59
LSM2-208ENST00000375661 NPAS2Q99743 824 aa11.35□□□□□ -0.59
LSM2-208ENST00000375661 TRMOQ9BU70 441 aa11.35□□□□□ -0.59
LSM2-208ENST00000375661 HES7Q9BYE0 225 aa11.35□□□□□ -0.59
LSM2-208ENST00000375661 C20orf27Q9GZN8 174 aa11.35□□□□□ -0.59
LSM2-208ENST00000375661 TSPAN10Q9H1Z9 355 aaPredicted RBP11.35□□□□□ -0.59
LSM2-208ENST00000375661 OR51B5Q9H339 312 aa11.35□□□□□ -0.59
LSM2-208ENST00000375661 ZNF395Q9H8N7 513 aaPredicted RBP11.35□□□□□ -0.59
LSM2-208ENST00000375661 FARSBQ9NSD9 589 aaKnown RBP11.35□□□□□ -0.59
LSM2-208ENST00000375661 ANKRD10Q9NXR5 420 aa11.35□□□□□ -0.59
LSM2-208ENST00000375661 PSD3Q9NYI0 1048 aa11.35□□□□□ -0.59
LSM2-208ENST00000375661 NKIRAS1Q9NYS0 192 aa11.35□□□□□ -0.59
LSM2-208ENST00000375661 LRFN1Q9P244 771 aa11.35□□□□□ -0.59
LSM2-208ENST00000375661 TNFRSF10DQ9UBN6 386 aa11.35□□□□□ -0.59
LSM2-208ENST00000375661 ADGRE2Q9UHX3 823 aa11.35□□□□□ -0.59
LSM2-208ENST00000375661 PPT2Q9UMR5 302 aa11.35□□□□□ -0.59
LSM2-208ENST00000375661 TIMM22Q9Y584 194 aa11.35□□□□□ -0.59
LSM2-208ENST00000375661 FAM221AA4D161 298 aa11.34□□□□□ -0.59
LSM2-208ENST00000375661 H3BQF6 201 aa11.34□□□□□ -0.59
LSM2-208ENST00000375661 FOXE1O00358 373 aaPredicted RBP11.34□□□□□ -0.59
LSM2-208ENST00000375661 MANBAO00462 879 aa11.34□□□□□ -0.59
LSM2-208ENST00000375661 NME2P1O60361 137 aa11.34□□□□□ -0.59
LSM2-208ENST00000375661 DNAJB6O75190 326 aa11.34□□□□□ -0.59
LSM2-208ENST00000375661 SH3BGRLO75368 114 aa11.34□□□□□ -0.59
LSM2-208ENST00000375661 LYPLA1O75608 230 aaPredicted RBP11.34□□□□□ -0.59
LSM2-208ENST00000375661 ETHE1O95571 254 aa11.34□□□□□ -0.59
LSM2-208ENST00000375661 TGFB1P01137 390 aa11.34□□□□□ -0.59
LSM2-208ENST00000375661 PDYNP01213 254 aa11.34□□□□□ -0.59
LSM2-208ENST00000375661 SERPINE1P05121 402 aa11.34□□□□□ -0.59
LSM2-208ENST00000375661 ENO1P06733 434 aaKnown RBP11.34□□□□□ -0.59
LSM2-208ENST00000375661 ZNF888P0CJ79 500 aaPredicted RBP11.34□□□□□ -0.59
LSM2-208ENST00000375661 ALOX12P18054 663 aa11.34□□□□□ -0.59
LSM2-208ENST00000375661 IL1RNP18510 177 aa11.34□□□□□ -0.59
LSM2-208ENST00000375661 NME2P22392 152 aa11.34□□□□□ -0.59
LSM2-208ENST00000375661 SERPINB3P29508 390 aa11.34□□□□□ -0.59
LSM2-208ENST00000375661 SERPINB5P36952 375 aa11.34□□□□□ -0.59
LSM2-208ENST00000375661 HTR6P50406 440 aa11.34□□□□□ -0.59
LSM2-208ENST00000375661 RAB8AP61006 207 aa11.34□□□□□ -0.59
LSM2-208ENST00000375661 PPP2R2AP63151 447 aa11.34□□□□□ -0.59
LSM2-208ENST00000375661 ACTN3Q08043 901 aaPredicted RBP11.34□□□□□ -0.59
LSM2-208ENST00000375661 GALNT1Q10472 559 aaPredicted RBP11.34□□□□□ -0.59
LSM2-208ENST00000375661 SFT2D3Q587I9 215 aa11.34□□□□□ -0.59
LSM2-208ENST00000375661 SGO1Q5FBB7 561 aa11.34□□□□□ -0.59
LSM2-208ENST00000375661 DEPDC1Q5TB30 811 aa11.34□□□□□ -0.59
LSM2-208ENST00000375661 TTC19Q6DKK2 380 aaPredicted RBP11.34□□□□□ -0.59
LSM2-208ENST00000375661 TMEM211Q6ICI0 200 aa11.34□□□□□ -0.59
LSM2-208ENST00000375661 UBE3DQ7Z6J8 389 aa11.34□□□□□ -0.59
LSM2-208ENST00000375661 AMER2Q8N7J2 671 aa11.34□□□□□ -0.59
LSM2-208ENST00000375661 SREK1Q8WXA9 508 aaKnown RBP11.34□□□□□ -0.59
LSM2-208ENST00000375661 CMTM7Q96FZ5 175 aa11.34□□□□□ -0.59
LSM2-208ENST00000375661 OR1F2PQ96R84 312 aa11.34□□□□□ -0.59
LSM2-208ENST00000375661 REXO4Q9GZR2 422 aaKnown RBP11.34□□□□□ -0.59
LSM2-208ENST00000375661 ELOVL6Q9H5J4 265 aa11.34□□□□□ -0.59
LSM2-208ENST00000375661 TRIM45Q9H8W5 580 aaPredicted RBP11.34□□□□□ -0.59
LSM2-208ENST00000375661 SLC24A3Q9HC58 644 aa11.34□□□□□ -0.59
LSM2-208ENST00000375661 ANKHQ9HCJ1 492 aa11.34□□□□□ -0.59
LSM2-208ENST00000375661 SNX6Q9UNH7 406 aa11.34□□□□□ -0.59
LSM2-208ENST00000375661 INTS1Q8N201 2190 aaKnown RBP11.33□□□□□ -0.6
LSM2-208ENST00000375661 A0A0G2JN53 185 aa11.33□□□□□ -0.6
LSM2-208ENST00000375661 TMEM114B3SHH9 223 aa11.33□□□□□ -0.6
LSM2-208ENST00000375661 SGK494L7N484 410 aa11.33□□□□□ -0.6
LSM2-208ENST00000375661 ERI3O43414 337 aaKnown RBP11.33□□□□□ -0.6
LSM2-208ENST00000375661 GALR3O60755 368 aaPredicted RBP11.33□□□□□ -0.6
LSM2-208ENST00000375661 SLC25A12O75746 678 aa11.33□□□□□ -0.6
LSM2-208ENST00000375661 FGF4P08620 206 aa11.33□□□□□ -0.6
LSM2-208ENST00000375661 CHN1P15882 459 aa11.33□□□□□ -0.6
LSM2-208ENST00000375661 HMOX2P30519 316 aa11.33□□□□□ -0.6
LSM2-208ENST00000375661 SLC26A5P58743 744 aa11.33□□□□□ -0.6
LSM2-208ENST00000375661 ABCE1P61221 599 aaKnown RBP11.33□□□□□ -0.6
LSM2-208ENST00000375661 STXBP1P61764 594 aaKnown RBP11.33□□□□□ -0.6
LSM2-208ENST00000375661 RHAGQ02094 409 aa11.33□□□□□ -0.6
LSM2-208ENST00000375661 BST1Q10588 318 aa11.33□□□□□ -0.6
LSM2-208ENST00000375661 IFT88Q13099 833 aa11.33□□□□□ -0.6
LSM2-208ENST00000375661 HERC3Q15034 1050 aa11.33□□□□□ -0.6
LSM2-208ENST00000375661 NSDHLQ15738 373 aa11.33□□□□□ -0.6
LSM2-208ENST00000375661 MAPKAPK3Q16644 382 aa11.33□□□□□ -0.6
LSM2-208ENST00000375661 DEFB134Q4QY38 66 aa11.33□□□□□ -0.6
LSM2-208ENST00000375661 C10orf62Q5T681 223 aaPredicted RBP11.33□□□□□ -0.6
LSM2-208ENST00000375661 KHDRBS2Q5VWX1 349 aaKnown RBP11.33□□□□□ -0.6
LSM2-208ENST00000375661 ABHD17CQ6PCB6 329 aa11.33□□□□□ -0.6
LSM2-208ENST00000375661 NCCRP1Q6ZVX7 275 aaPredicted RBP11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms