RNA–Protein interactions for RNA: ENST00000347617.10

HMGA1-202, Transcript of high mobility group AT-hook 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HMGA1, Length 1,773 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-202ENST00000347617 GOT1L1Q8NHS2 421 aaPredicted RBP15.12■□□□□ 0.01
HMGA1-202ENST00000347617 ECHDC3Q96DC8 303 aa15.12■□□□□ 0.01
HMGA1-202ENST00000347617 RNF31Q96EP0 1072 aa15.12■□□□□ 0.01
HMGA1-202ENST00000347617 KCTD7Q96MP8 289 aa15.12■□□□□ 0.01
HMGA1-202ENST00000347617 SLC12A9Q9BXP2 914 aa15.12■□□□□ 0.01
HMGA1-202ENST00000347617 LINC00597Q9H2U6 94 aa15.12■□□□□ 0.01
HMGA1-202ENST00000347617 TRIM45Q9H8W5 580 aaPredicted RBP15.12■□□□□ 0.01
HMGA1-202ENST00000347617 ACER3Q9NUN7 267 aa15.12■□□□□ 0.01
HMGA1-202ENST00000347617 TAS2R16Q9NYV7 291 aa15.12■□□□□ 0.01
HMGA1-202ENST00000347617 VPS29Q9UBQ0 182 aa15.12■□□□□ 0.01
HMGA1-202ENST00000347617 ALG5Q9Y673 324 aa15.12■□□□□ 0.01
HMGA1-202ENST00000347617 AUP1Q9Y679 476 aa15.12■□□□□ 0.01
HMGA1-202ENST00000347617 A0A1W2PQL4 384 aaPredicted RBP15.11■□□□□ 0.01
HMGA1-202ENST00000347617 WASH3PC4AMC7 463 aa15.11■□□□□ 0.01
HMGA1-202ENST00000347617 NEDD8-MDP1E9PL57 170 aa15.11■□□□□ 0.01
HMGA1-202ENST00000347617 CACNB4O00305 520 aaPredicted RBP15.11■□□□□ 0.01
HMGA1-202ENST00000347617 MYL12BO14950 172 aa15.11■□□□□ 0.01
HMGA1-202ENST00000347617 CPEP16870 476 aa15.11■□□□□ 0.01
HMGA1-202ENST00000347617 MYL12AP19105 171 aa15.11■□□□□ 0.01
HMGA1-202ENST00000347617 CNR2P34972 360 aa15.11■□□□□ 0.01
HMGA1-202ENST00000347617 GPC1P35052 558 aa15.11■□□□□ 0.01
HMGA1-202ENST00000347617 AP1S2P56377 157 aa15.11■□□□□ 0.01
HMGA1-202ENST00000347617 BTG1P62324 171 aa15.11■□□□□ 0.01
HMGA1-202ENST00000347617 ACSM2AQ08AH3 577 aa15.11■□□□□ 0.01
HMGA1-202ENST00000347617 ILKQ13418 452 aa15.11■□□□□ 0.01
HMGA1-202ENST00000347617 TP53BP2Q13625 1128 aa15.11■□□□□ 0.01
HMGA1-202ENST00000347617 SF3A2Q15428 464 aaKnown RBP15.11■□□□□ 0.01
HMGA1-202ENST00000347617 ZNF628Q5EBL2 1059 aa15.11■□□□□ 0.01
HMGA1-202ENST00000347617 LY6G5CQ5SRR4 150 aa15.11■□□□□ 0.01
HMGA1-202ENST00000347617 ACSM2BQ68CK6 577 aa15.11■□□□□ 0.01
HMGA1-202ENST00000347617 BICRALQ6AI39 1079 aa15.11■□□□□ 0.01
HMGA1-202ENST00000347617 ASTLQ6HA08 431 aaPredicted RBP15.11■□□□□ 0.01
HMGA1-202ENST00000347617 TMEM184AQ6ZMB5 413 aa15.11■□□□□ 0.01
HMGA1-202ENST00000347617 UTS2BQ765I0 119 aa15.11■□□□□ 0.01
HMGA1-202ENST00000347617 ADGRD2Q7Z7M1 963 aa15.11■□□□□ 0.01
HMGA1-202ENST00000347617 CLECL1Q8IZS7 167 aa15.11■□□□□ 0.01
HMGA1-202ENST00000347617 SLC34A3Q8N130 599 aa15.11■□□□□ 0.01
HMGA1-202ENST00000347617 OXR1Q8N573 874 aa15.11■□□□□ 0.01
HMGA1-202ENST00000347617 PLA2G15Q8NCC3 412 aa15.11■□□□□ 0.01
HMGA1-202ENST00000347617 LSM14AQ8ND56 463 aaKnown RBP15.11■□□□□ 0.01
HMGA1-202ENST00000347617 POLR2J2Q9GZM3 115 aaKnown RBP15.11■□□□□ 0.01
HMGA1-202ENST00000347617 NT5DC2Q9H857 520 aa15.11■□□□□ 0.01
HMGA1-202ENST00000347617 BRF2Q9HAW0 419 aa15.11■□□□□ 0.01
HMGA1-202ENST00000347617 TRPV4Q9HBA0 871 aa15.11■□□□□ 0.01
HMGA1-202ENST00000347617 MSRAQ9UJ68 235 aa15.11■□□□□ 0.01
HMGA1-202ENST00000347617 CRLS1Q9UJA2 301 aa15.11■□□□□ 0.01
HMGA1-202ENST00000347617 ADAM30Q9UKF2 790 aa15.11■□□□□ 0.01
HMGA1-202ENST00000347617 MGAT4BQ9UQ53 548 aa15.11■□□□□ 0.01
HMGA1-202ENST00000347617 PIKFYVEQ9Y2I7 2098 aa15.11■□□□□ 0.01
HMGA1-202ENST00000347617 NUP210Q8TEM1 1887 aaPredicted RBP15.11■□□□□ 0.01
HMGA1-202ENST00000347617 LEUTXA8MZ59 168 aa15.11■□□□□ 0.01
HMGA1-202ENST00000347617 TNFRSF21O75509 655 aa15.11■□□□□ 0.01
HMGA1-202ENST00000347617 GCM2O75603 506 aaPredicted RBP15.11■□□□□ 0.01
HMGA1-202ENST00000347617 OSMP13725 252 aa15.11■□□□□ 0.01
HMGA1-202ENST00000347617 CFL1P23528 166 aaKnown RBP15.11■□□□□ 0.01
HMGA1-202ENST00000347617 RPL3P39023 403 aaKnown RBP15.11■□□□□ 0.01
HMGA1-202ENST00000347617 TAGLNQ01995 201 aaKnown RBP15.11■□□□□ 0.01
HMGA1-202ENST00000347617 C22orf39Q6P5X5 142 aa15.11■□□□□ 0.01
HMGA1-202ENST00000347617 LYPD8Q6UX82 237 aa15.11■□□□□ 0.01
HMGA1-202ENST00000347617 ADIPOR2Q86V24 386 aa15.11■□□□□ 0.01
HMGA1-202ENST00000347617 PHC2Q8IXK0 858 aa15.11■□□□□ 0.01
HMGA1-202ENST00000347617 FAM20CQ8IXL6 584 aa15.11■□□□□ 0.01
HMGA1-202ENST00000347617 LAS2Q8IYD9 372 aa15.11■□□□□ 0.01
HMGA1-202ENST00000347617 SLC38A6Q8IZM9 456 aa15.11■□□□□ 0.01
HMGA1-202ENST00000347617 CAMKK1Q8N5S9 505 aa15.11■□□□□ 0.01
HMGA1-202ENST00000347617 OR52N2Q8NGI0 321 aa15.11■□□□□ 0.01
HMGA1-202ENST00000347617 OR8J1Q8NGP2 316 aa15.11■□□□□ 0.01
HMGA1-202ENST00000347617 VANGL1Q8TAA9 524 aaPredicted RBP15.11■□□□□ 0.01
HMGA1-202ENST00000347617 WFIKKN2Q8TEU8 576 aa15.11■□□□□ 0.01
HMGA1-202ENST00000347617 SH3KBP1Q96B97 665 aa15.11■□□□□ 0.01
HMGA1-202ENST00000347617 MARVELD1Q9BSK0 173 aa15.11■□□□□ 0.01
HMGA1-202ENST00000347617 TM6SF2Q9BZW4 377 aa15.11■□□□□ 0.01
HMGA1-202ENST00000347617 UCK2Q9BZX2 261 aa15.11■□□□□ 0.01
HMGA1-202ENST00000347617 BHLHE41Q9C0J9 482 aaPredicted RBP15.11■□□□□ 0.01
HMGA1-202ENST00000347617 SPATA6Q9NWH7 488 aaPredicted RBP15.11■□□□□ 0.01
HMGA1-202ENST00000347617 TXNL4BQ9NX01 149 aaKnown RBP15.11■□□□□ 0.01
HMGA1-202ENST00000347617 GDE1Q9NZC3 331 aa15.11■□□□□ 0.01
HMGA1-202ENST00000347617 EIF3KQ9UBQ5 218 aaKnown RBP15.11■□□□□ 0.01
HMGA1-202ENST00000347617 PLEKHB1Q9UF11 243 aaPredicted RBP15.11■□□□□ 0.01
HMGA1-202ENST00000347617 TMPRSS11EQ9UL52 423 aa15.11■□□□□ 0.01
HMGA1-202ENST00000347617 GSTK1Q9Y2Q3 226 aa15.11■□□□□ 0.01
HMGA1-202ENST00000347617 H3BM21 787 aa15.1■□□□□ 0.01
HMGA1-202ENST00000347617 SGK494L7N484 410 aa15.1■□□□□ 0.01
HMGA1-202ENST00000347617 GAPDHSO14556 408 aaPredicted RBP15.1■□□□□ 0.01
HMGA1-202ENST00000347617 LAMP1P11279 417 aa15.1■□□□□ 0.01
HMGA1-202ENST00000347617 AOAHP28039 575 aa15.1■□□□□ 0.01
HMGA1-202ENST00000347617 NSG1P42857 185 aa15.1■□□□□ 0.01
HMGA1-202ENST00000347617 HNRNPA0Q13151 305 aaKnown RBP15.1■□□□□ 0.01
HMGA1-202ENST00000347617 SCARB2Q14108 478 aa15.1■□□□□ 0.01
HMGA1-202ENST00000347617 CDKN3Q16667 212 aa15.1■□□□□ 0.01
HMGA1-202ENST00000347617 SLC25A30Q5SVS4 291 aa15.1■□□□□ 0.01
HMGA1-202ENST00000347617 ZNF697Q5TEC3 545 aa15.1■□□□□ 0.01
HMGA1-202ENST00000347617 C12orf73Q69YU5 71 aa15.1■□□□□ 0.01
HMGA1-202ENST00000347617 TRIM40Q6P9F5 258 aa15.1■□□□□ 0.01
HMGA1-202ENST00000347617 KLHL17Q6TDP4 642 aa15.1■□□□□ 0.01
HMGA1-202ENST00000347617 FAM151BQ6UXP7 276 aa15.1■□□□□ 0.01
HMGA1-202ENST00000347617 UBE2R2Q712K3 238 aaPredicted RBP15.1■□□□□ 0.01
HMGA1-202ENST00000347617 TRIM48Q8IWZ4 208 aa15.1■□□□□ 0.01
HMGA1-202ENST00000347617 AQP11Q8NBQ7 271 aa15.1■□□□□ 0.01
HMGA1-202ENST00000347617 OR9Q2Q8NGE9 314 aa15.1■□□□□ 0.01
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