RNA–Protein interactions for RNA: ENST00000346495.6

TSPAN3-202, Transcript of tetraspanin 3, humanhuman

TSL 2 BASIC

Gene TSPAN3, Length 1,647 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-202ENST00000346495 ZNF750Q32MQ0 723 aa20.24■□□□□ 0.83
TSPAN3-202ENST00000346495 BHLHB9Q6PI77 547 aa20.24■□□□□ 0.83
TSPAN3-202ENST00000346495 FAM86B1Q8N7N1 296 aa20.24■□□□□ 0.83
TSPAN3-202ENST00000346495 MAL2Q969L2 176 aa20.24■□□□□ 0.83
TSPAN3-202ENST00000346495 EME1Q96AY2 570 aa20.24■□□□□ 0.83
TSPAN3-202ENST00000346495 CENPNQ96H22 339 aaPredicted RBP20.24■□□□□ 0.83
TSPAN3-202ENST00000346495 VCXQ9H320 206 aa20.24■□□□□ 0.83
TSPAN3-202ENST00000346495 ZCCHC3Q9NUD5 404 aaKnown RBP20.24■□□□□ 0.83
TSPAN3-202ENST00000346495 IRAK4Q9NWZ3 460 aa20.24■□□□□ 0.83
TSPAN3-202ENST00000346495 SIGLEC6O43699 453 aa20.23■□□□□ 0.83
TSPAN3-202ENST00000346495 ARAFP10398 606 aa20.23■□□□□ 0.83
TSPAN3-202ENST00000346495 ACADSP16219 412 aa20.23■□□□□ 0.83
TSPAN3-202ENST00000346495 AVPR2P30518 371 aa20.23■□□□□ 0.83
TSPAN3-202ENST00000346495 CSF2RBP32927 897 aa20.23■□□□□ 0.83
TSPAN3-202ENST00000346495 SIM1P81133 766 aaPredicted RBP20.23■□□□□ 0.83
TSPAN3-202ENST00000346495 TP53BP2Q13625 1128 aa20.23■□□□□ 0.83
TSPAN3-202ENST00000346495 SCARB2Q14108 478 aa20.23■□□□□ 0.83
TSPAN3-202ENST00000346495 FAM53BQ14153 422 aa20.23■□□□□ 0.83
TSPAN3-202ENST00000346495 SFT2D3Q587I9 215 aa20.23■□□□□ 0.83
TSPAN3-202ENST00000346495 CMPK2Q5EBM0 449 aa20.23■□□□□ 0.83
TSPAN3-202ENST00000346495 TRIM61Q5EBN2 209 aa20.23■□□□□ 0.83
TSPAN3-202ENST00000346495 INTS11Q5TA45 600 aaKnown RBP20.23■□□□□ 0.83
TSPAN3-202ENST00000346495 CEACAM20Q6UY09 585 aa20.23■□□□□ 0.83
TSPAN3-202ENST00000346495 USP53Q70EK8 1073 aa20.23■□□□□ 0.83
TSPAN3-202ENST00000346495 PRSS42Q7Z5A4 293 aa20.23■□□□□ 0.83
TSPAN3-202ENST00000346495 KMT5CQ86Y97 462 aa20.23■□□□□ 0.83
TSPAN3-202ENST00000346495 LRRC25Q8N386 305 aaPredicted RBP20.23■□□□□ 0.83
TSPAN3-202ENST00000346495 TTC29Q8NA56 475 aaPredicted RBP20.23■□□□□ 0.83
TSPAN3-202ENST00000346495 OR5T3Q8NGG3 340 aa20.23■□□□□ 0.83
TSPAN3-202ENST00000346495 OR9A4Q8NGU2 314 aa20.23■□□□□ 0.83
TSPAN3-202ENST00000346495 SLC35G5Q96KT7 338 aa20.23■□□□□ 0.83
TSPAN3-202ENST00000346495 CNOT11Q9UKZ1 510 aaKnown RBP20.23■□□□□ 0.83
TSPAN3-202ENST00000346495 HYKKA2RU49 373 aa20.22■□□□□ 0.83
TSPAN3-202ENST00000346495 FITM1A5D6W6 292 aa20.22■□□□□ 0.83
TSPAN3-202ENST00000346495 PATE3B3GLJ2 98 aa20.22■□□□□ 0.83
TSPAN3-202ENST00000346495 CYR61O00622 381 aa20.22■□□□□ 0.83
TSPAN3-202ENST00000346495 ARHGAP33O14559 1287 aa20.22■□□□□ 0.83
TSPAN3-202ENST00000346495 B4GALT2O60909 372 aa20.22■□□□□ 0.83
TSPAN3-202ENST00000346495 LDLRP01130 860 aa20.22■□□□□ 0.83
TSPAN3-202ENST00000346495 SYPP08247 313 aa20.22■□□□□ 0.83
TSPAN3-202ENST00000346495 XKP51811 444 aa20.22■□□□□ 0.83
TSPAN3-202ENST00000346495 EMP3P54852 163 aa20.22■□□□□ 0.83
TSPAN3-202ENST00000346495 SHC2P98077 582 aa20.22■□□□□ 0.83
TSPAN3-202ENST00000346495 CDK6Q00534 326 aa20.22■□□□□ 0.83
TSPAN3-202ENST00000346495 EEF1A2Q05639 463 aaKnown RBP20.22■□□□□ 0.83
TSPAN3-202ENST00000346495 ANGPT1Q15389 498 aa20.22■□□□□ 0.83
TSPAN3-202ENST00000346495 INAVAQ3KP66 663 aa20.22■□□□□ 0.83
TSPAN3-202ENST00000346495 CBLL1Q75N03 491 aa20.22■□□□□ 0.83
TSPAN3-202ENST00000346495 EIF3MQ7L2H7 374 aaKnown RBP20.22■□□□□ 0.83
TSPAN3-202ENST00000346495 OR56A1Q8NGH5 318 aa20.22■□□□□ 0.83
TSPAN3-202ENST00000346495 TANKQ92844 425 aa20.22■□□□□ 0.83
TSPAN3-202ENST00000346495 ASPSCR1Q9BZE9 553 aa20.22■□□□□ 0.83
TSPAN3-202ENST00000346495 C3orf14Q9HBI5 128 aa20.22■□□□□ 0.83
TSPAN3-202ENST00000346495 THUMPD1Q9NXG2 353 aaKnown RBP20.22■□□□□ 0.83
TSPAN3-202ENST00000346495 CLCA2Q9UQC9 943 aa20.22■□□□□ 0.83
TSPAN3-202ENST00000346495 ANGPT4Q9Y264 503 aa20.22■□□□□ 0.83
TSPAN3-202ENST00000346495 A0A1W2PS29 197 aa20.21■□□□□ 0.83
TSPAN3-202ENST00000346495 RDH16O75452 317 aa20.21■□□□□ 0.83
TSPAN3-202ENST00000346495 ZNF682O95780 498 aa20.21■□□□□ 0.83
TSPAN3-202ENST00000346495 FHP07954 510 aa20.21■□□□□ 0.83
TSPAN3-202ENST00000346495 ATP6V1C1P21283 382 aa20.21■□□□□ 0.83
TSPAN3-202ENST00000346495 PRR5P85299 388 aa20.21■□□□□ 0.83
TSPAN3-202ENST00000346495 SQSTM1Q13501 440 aa20.21■□□□□ 0.83
TSPAN3-202ENST00000346495 GRM7Q14831 915 aa20.21■□□□□ 0.83
TSPAN3-202ENST00000346495 HORMAD2Q8N7B1 307 aa20.21■□□□□ 0.83
TSPAN3-202ENST00000346495 ICA1LQ8NDH6 482 aa20.21■□□□□ 0.83
TSPAN3-202ENST00000346495 NFKBIDQ8NI38 313 aa20.21■□□□□ 0.83
TSPAN3-202ENST00000346495 CLK4Q9HAZ1 481 aaKnown RBP20.21■□□□□ 0.83
TSPAN3-202ENST00000346495 A4GALTQ9NPC4 353 aa20.21■□□□□ 0.83
TSPAN3-202ENST00000346495 TMEM9Q9P0T7 183 aa20.21■□□□□ 0.83
TSPAN3-202ENST00000346495 ARID1BQ8NFD5 2236 aaPredicted RBP20.21■□□□□ 0.83
TSPAN3-202ENST00000346495 A0A0A6YYC8 382 aaPredicted RBP20.2■□□□□ 0.82
TSPAN3-202ENST00000346495 LY6G6EA0A0G2JKS1 128 aa20.2■□□□□ 0.82
TSPAN3-202ENST00000346495 CPED1A4D0V7 1026 aa20.2■□□□□ 0.82
TSPAN3-202ENST00000346495 FAM149AA5PLN7 773 aa20.2■□□□□ 0.82
TSPAN3-202ENST00000346495 I3L1I5 382 aaPredicted RBP20.2■□□□□ 0.82
TSPAN3-202ENST00000346495 EMC8O43402 210 aa20.2■□□□□ 0.82
TSPAN3-202ENST00000346495 FOXS1O43638 330 aa20.2■□□□□ 0.82
TSPAN3-202ENST00000346495 DEAF1O75398 565 aaPredicted RBP20.2■□□□□ 0.82
TSPAN3-202ENST00000346495 NSA2O95478 260 aaKnown RBP20.2■□□□□ 0.82
TSPAN3-202ENST00000346495 SEPHS1P49903 392 aa20.2■□□□□ 0.82
TSPAN3-202ENST00000346495 ANXA11P50995 505 aaKnown RBP20.2■□□□□ 0.82
TSPAN3-202ENST00000346495 ELOAQ14241 798 aaKnown RBP20.2■□□□□ 0.82
TSPAN3-202ENST00000346495 NKG7Q16617 165 aa20.2■□□□□ 0.82
TSPAN3-202ENST00000346495 TMTC4Q5T4D3 741 aa20.2■□□□□ 0.82
TSPAN3-202ENST00000346495 GUSBP11Q6P575 273 aa20.2■□□□□ 0.82
TSPAN3-202ENST00000346495 TNFAIP8L2Q6P589 184 aaPredicted RBP20.2■□□□□ 0.82
TSPAN3-202ENST00000346495 TMEM107Q6UX40 140 aa20.2■□□□□ 0.82
TSPAN3-202ENST00000346495 CCDC80Q76M96 950 aa20.2■□□□□ 0.82
TSPAN3-202ENST00000346495 SZRD1Q7Z422 152 aa20.2■□□□□ 0.82
TSPAN3-202ENST00000346495 ZC3H7AQ8IWR0 971 aaKnown RBP20.2■□□□□ 0.82
TSPAN3-202ENST00000346495 D2HGDHQ8N465 521 aa20.2■□□□□ 0.82
TSPAN3-202ENST00000346495 EID2Q8N6I1 236 aa20.2■□□□□ 0.82
TSPAN3-202ENST00000346495 OR9A2Q8NGT5 310 aa20.2■□□□□ 0.82
TSPAN3-202ENST00000346495 BDH2Q9BUT1 245 aa20.2■□□□□ 0.82
TSPAN3-202ENST00000346495 ENAMQ9NRM1 1142 aa20.2■□□□□ 0.82
TSPAN3-202ENST00000346495 ADPRHL2Q9NX46 363 aa20.2■□□□□ 0.82
TSPAN3-202ENST00000346495 U3KQA8 63 aa20.2■□□□□ 0.82
TSPAN3-202ENST00000346495 EME2A4GXA9 379 aaPredicted RBP20.2■□□□□ 0.82
TSPAN3-202ENST00000346495 CLOCKO15516 846 aa20.2■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms