RNA–Protein interactions for RNA: ENST00000336648.8

HLCS-201, Transcript of holocarboxylase synthetase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HLCS, Length 6,010 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLCS-201ENST00000336648 C11orf49Q9H6J7 331 aa12.56□□□□□ -0.4
HLCS-201ENST00000336648 B4GALT7Q9UBV7 327 aa12.56□□□□□ -0.4
HLCS-201ENST00000336648 C1orf226A1L170 272 aa12.56□□□□□ -0.4
HLCS-201ENST00000336648 OTOL1A6NHN0 477 aaPredicted RBP12.56□□□□□ -0.4
HLCS-201ENST00000336648 MMP20O60882 483 aa12.56□□□□□ -0.4
HLCS-201ENST00000336648 B4GALT2O60909 372 aa12.56□□□□□ -0.4
HLCS-201ENST00000336648 KCNJ13O60928 360 aa12.56□□□□□ -0.4
HLCS-201ENST00000336648 KCNC1P48547 511 aa12.56□□□□□ -0.4
HLCS-201ENST00000336648 TMEM35AQ53FP2 167 aa12.56□□□□□ -0.4
HLCS-201ENST00000336648 C6orf136Q5SQH8 315 aa12.56□□□□□ -0.4
HLCS-201ENST00000336648 HS3ST5Q8IZT8 346 aa12.56□□□□□ -0.4
HLCS-201ENST00000336648 MS4A15Q8N5U1 240 aa12.56□□□□□ -0.4
HLCS-201ENST00000336648 BEX2Q9BXY8 128 aa12.56□□□□□ -0.4
HLCS-201ENST00000336648 BEX1Q9HBH7 125 aa12.56□□□□□ -0.4
HLCS-201ENST00000336648 TTC24A2A3L6 582 aaPredicted RBP12.56□□□□□ -0.4
HLCS-201ENST00000336648 ANKRD33BA6NCL7 494 aa12.56□□□□□ -0.4
HLCS-201ENST00000336648 SULT1C2O00338 296 aa12.56□□□□□ -0.4
HLCS-201ENST00000336648 HEXBP07686 556 aa12.56□□□□□ -0.4
HLCS-201ENST00000336648 TIA1P31483 386 aaKnown RBP eCLIP12.56□□□□□ -0.4
HLCS-201ENST00000336648 CRISP1P54107 249 aa12.56□□□□□ -0.4
HLCS-201ENST00000336648 ZNF33BQ06732 778 aa12.56□□□□□ -0.4
HLCS-201ENST00000336648 ZNF616Q08AN1 781 aa12.56□□□□□ -0.4
HLCS-201ENST00000336648 GPR157Q5UAW9 335 aa12.56□□□□□ -0.4
HLCS-201ENST00000336648 CRTC1Q6UUV9 634 aa12.56□□□□□ -0.4
HLCS-201ENST00000336648 TSPAN33Q86UF1 283 aa12.56□□□□□ -0.4
HLCS-201ENST00000336648 LNX2Q8N448 690 aa12.56□□□□□ -0.4
HLCS-201ENST00000336648 SAMD12Q8N8I0 201 aa12.56□□□□□ -0.4
HLCS-201ENST00000336648 ISOC1Q96CN7 298 aa12.56□□□□□ -0.4
HLCS-201ENST00000336648 NAA11Q9BSU3 229 aaPredicted RBP12.56□□□□□ -0.4
HLCS-201ENST00000336648 STRADBQ9C0K7 418 aa12.56□□□□□ -0.4
HLCS-201ENST00000336648 ARL6Q9H0F7 186 aa12.56□□□□□ -0.4
HLCS-201ENST00000336648 FOLH1BQ9HBA9 442 aa12.56□□□□□ -0.4
HLCS-201ENST00000336648 MEPEQ9NQ76 525 aaPredicted RBP12.56□□□□□ -0.4
HLCS-201ENST00000336648 LRFN1Q9P244 771 aa12.56□□□□□ -0.4
HLCS-201ENST00000336648 MGAT4CQ9UBM8 478 aa12.56□□□□□ -0.4
HLCS-201ENST00000336648 A0A1B0GVT2 93 aa12.56□□□□□ -0.4
HLCS-201ENST00000336648 TRAPPC6AO75865 159 aa12.56□□□□□ -0.4
HLCS-201ENST00000336648 DIRAS3O95661 229 aa12.56□□□□□ -0.4
HLCS-201ENST00000336648 GALTP07902 379 aa12.56□□□□□ -0.4
HLCS-201ENST00000336648 RHCEP18577 417 aa12.56□□□□□ -0.4
HLCS-201ENST00000336648 RAB8AP61006 207 aa12.56□□□□□ -0.4
HLCS-201ENST00000336648 C3orf58Q8NDZ4 430 aa12.56□□□□□ -0.4
HLCS-201ENST00000336648 BIRC8Q96P09 236 aa12.56□□□□□ -0.4
HLCS-201ENST00000336648 KIDINS220Q9ULH0 1771 aa12.56□□□□□ -0.4
HLCS-201ENST00000336648 EEDO75530 441 aaKnown RBP12.56□□□□□ -0.4
HLCS-201ENST00000336648 PRKCGP05129 697 aa12.56□□□□□ -0.4
HLCS-201ENST00000336648 HOXB2P14652 356 aa12.56□□□□□ -0.4
HLCS-201ENST00000336648 RAB5CP51148 216 aa12.56□□□□□ -0.4
HLCS-201ENST00000336648 RABL3Q5HYI8 236 aa12.56□□□□□ -0.4
HLCS-201ENST00000336648 TMEM69Q5SWH9 247 aa12.56□□□□□ -0.4
HLCS-201ENST00000336648 MLIPQ5VWP3 458 aa12.56□□□□□ -0.4
HLCS-201ENST00000336648 NANOGP8Q6NSW7 305 aa12.56□□□□□ -0.4
HLCS-201ENST00000336648 DRAXINQ8NBI3 349 aaPredicted RBP12.56□□□□□ -0.4
HLCS-201ENST00000336648 ZNF461Q8TAF7 563 aa12.56□□□□□ -0.4
HLCS-201ENST00000336648 JPH3Q8WXH2 748 aaPredicted RBP12.56□□□□□ -0.4
HLCS-201ENST00000336648 NANOGQ9H9S0 305 aa12.56□□□□□ -0.4
HLCS-201ENST00000336648 OR2S2Q9NQN1 319 aa12.56□□□□□ -0.4
HLCS-201ENST00000336648 VNN3Q9NY84 501 aa12.56□□□□□ -0.4
HLCS-201ENST00000336648 SLC17A6Q9P2U8 582 aa12.56□□□□□ -0.4
HLCS-201ENST00000336648 EPHA6Q9UF33 1036 aa12.56□□□□□ -0.4
HLCS-201ENST00000336648 GMDSO60547 372 aa12.55□□□□□ -0.4
HLCS-201ENST00000336648 MRPS14O60783 128 aaKnown RBP12.55□□□□□ -0.4
HLCS-201ENST00000336648 SOX14O95416 240 aa12.55□□□□□ -0.4
HLCS-201ENST00000336648 PAK4O96013 591 aaPredicted RBP12.55□□□□□ -0.4
HLCS-201ENST00000336648 H2AFB2P0C5Z0 115 aa12.55□□□□□ -0.4
HLCS-201ENST00000336648 ASPGQ86U10 573 aa12.55□□□□□ -0.4
HLCS-201ENST00000336648 CCDC71Q8IV32 467 aaPredicted RBP12.55□□□□□ -0.4
HLCS-201ENST00000336648 ALDH16A1Q8IZ83 802 aa12.55□□□□□ -0.4
HLCS-201ENST00000336648 WDSUB1Q8N9V3 476 aa12.55□□□□□ -0.4
HLCS-201ENST00000336648 TMEM74Q96NL1 305 aa12.55□□□□□ -0.4
HLCS-201ENST00000336648 MEAF6Q9HAF1 191 aa12.55□□□□□ -0.4
HLCS-201ENST00000336648 MRC1P22897 1456 aa12.55□□□□□ -0.4
HLCS-201ENST00000336648 MTX2O75431 263 aa12.55□□□□□ -0.4
HLCS-201ENST00000336648 SLC34A2O95436 690 aa12.55□□□□□ -0.4
HLCS-201ENST00000336648 TYRP14679 529 aa12.55□□□□□ -0.4
HLCS-201ENST00000336648 NCS1P62166 190 aa12.55□□□□□ -0.4
HLCS-201ENST00000336648 TMEM115Q12893 351 aaPredicted RBP12.55□□□□□ -0.4
HLCS-201ENST00000336648 C6orf141Q5SZD1 244 aa12.55□□□□□ -0.4
HLCS-201ENST00000336648 LAS2Q8IYD9 372 aa12.55□□□□□ -0.4
HLCS-201ENST00000336648 OR56B2PQ8NGI1 322 aa12.55□□□□□ -0.4
HLCS-201ENST00000336648 KLHDC7BQ96G42 594 aa12.55□□□□□ -0.4
HLCS-201ENST00000336648 PLEKHA3Q9HB20 300 aa12.55□□□□□ -0.4
HLCS-201ENST00000336648 PAQR5Q9NXK6 330 aaPredicted RBP12.55□□□□□ -0.4
HLCS-201ENST00000336648 INSL5Q9Y5Q6 135 aa12.55□□□□□ -0.4
HLCS-201ENST00000336648 NPIPA2E9PIF3 369 aa12.55□□□□□ -0.4
HLCS-201ENST00000336648 NPIPA3F8WFD2 350 aa12.55□□□□□ -0.4
HLCS-201ENST00000336648 KHNYNO15037 678 aaKnown RBP12.55□□□□□ -0.4
HLCS-201ENST00000336648 CCND3P30281 292 aaPredicted RBP12.55□□□□□ -0.4
HLCS-201ENST00000336648 CD79BP40259 229 aa12.55□□□□□ -0.4
HLCS-201ENST00000336648 MAGEA3P43357 314 aa12.55□□□□□ -0.4
HLCS-201ENST00000336648 CDK3Q00526 305 aa12.55□□□□□ -0.4
HLCS-201ENST00000336648 RCAN2Q14206 197 aa12.55□□□□□ -0.4
HLCS-201ENST00000336648 KBTBD6Q86V97 674 aa12.55□□□□□ -0.4
HLCS-201ENST00000336648 OR51G2Q8NGK0 314 aa12.55□□□□□ -0.4
HLCS-201ENST00000336648 CYB5D2Q8WUJ1 264 aa12.55□□□□□ -0.4
HLCS-201ENST00000336648 FBXL20Q96IG2 436 aa12.55□□□□□ -0.4
HLCS-201ENST00000336648 SAMD11Q96NU1 681 aa12.55□□□□□ -0.4
HLCS-201ENST00000336648 A0A1W2PPL8 197 aa12.55□□□□□ -0.4
HLCS-201ENST00000336648 F8W036 122 aa12.55□□□□□ -0.4
HLCS-201ENST00000336648 TSPAN6O43657 245 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms