RNA–Protein interactions for RNA: ENST00000320755.11

COL9A1-201, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL9A1, Length 3,059 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-201ENST00000320755 ARHGAP33O14559 1287 aa16.53■□□□□ 0.24
COL9A1-201ENST00000320755 NME6O75414 186 aaPredicted RBP16.53■□□□□ 0.24
COL9A1-201ENST00000320755 ERAL1O75616 437 aaKnown RBP16.53■□□□□ 0.24
COL9A1-201ENST00000320755 MFN2O95140 757 aa16.53■□□□□ 0.24
COL9A1-201ENST00000320755 UGT2B10P36537 528 aa16.53■□□□□ 0.24
COL9A1-201ENST00000320755 P2RY2P41231 377 aa16.53■□□□□ 0.24
COL9A1-201ENST00000320755 PXNP49023 591 aaPredicted RBP16.53■□□□□ 0.24
COL9A1-201ENST00000320755 IKBIPQ70UQ0 350 aa16.53■□□□□ 0.24
COL9A1-201ENST00000320755 TCEANCQ8N8B7 351 aa16.53■□□□□ 0.24
COL9A1-201ENST00000320755 WFIKKN2Q8TEU8 576 aa16.53■□□□□ 0.24
COL9A1-201ENST00000320755 OR5P2Q8WZ92 322 aa16.53■□□□□ 0.24
COL9A1-201ENST00000320755 SUSD6Q92537 303 aa16.53■□□□□ 0.24
COL9A1-201ENST00000320755 MS4A8Q9BY19 250 aa16.53■□□□□ 0.24
COL9A1-201ENST00000320755 NUAK2Q9H093 628 aa16.53■□□□□ 0.24
COL9A1-201ENST00000320755 POLR2J3Q9H1A7 115 aaKnown RBP16.53■□□□□ 0.24
COL9A1-201ENST00000320755 TPK1Q9H3S4 243 aa16.53■□□□□ 0.24
COL9A1-201ENST00000320755 PNMA8CA0A1B0GUJ8 204 aa16.52■□□□□ 0.24
COL9A1-201ENST00000320755 EFCAB10A6NFE3 127 aa16.52■□□□□ 0.24
COL9A1-201ENST00000320755 WWP2O00308 870 aa16.52■□□□□ 0.24
COL9A1-201ENST00000320755 RGS5O15539 181 aa16.52■□□□□ 0.24
COL9A1-201ENST00000320755 RB1P06400 928 aa16.52■□□□□ 0.24
COL9A1-201ENST00000320755 CCR8P51685 355 aa16.52■□□□□ 0.24
COL9A1-201ENST00000320755 TPTEP56180 551 aa16.52■□□□□ 0.24
COL9A1-201ENST00000320755 FBXO43Q4G163 708 aa16.52■□□□□ 0.24
COL9A1-201ENST00000320755 PLAG1Q6DJT9 500 aa16.52■□□□□ 0.24
COL9A1-201ENST00000320755 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP16.52■□□□□ 0.24
COL9A1-201ENST00000320755 FAM46DQ8NEK8 389 aa16.52■□□□□ 0.24
COL9A1-201ENST00000320755 SMPDL3AQ92484 453 aa16.52■□□□□ 0.24
COL9A1-201ENST00000320755 PPP1R16AQ96I34 528 aa16.52■□□□□ 0.24
COL9A1-201ENST00000320755 TVP23BQ9NYZ1 205 aa16.52■□□□□ 0.24
COL9A1-201ENST00000320755 KNL1Q8NG31 2342 aa16.52■□□□□ 0.24
COL9A1-201ENST00000320755 VEGFDO43915 354 aa16.52■□□□□ 0.23
COL9A1-201ENST00000320755 CYP7B1O75881 506 aa16.52■□□□□ 0.23
COL9A1-201ENST00000320755 FGBP02675 491 aa16.52■□□□□ 0.23
COL9A1-201ENST00000320755 NR2F1P10589 423 aa16.52■□□□□ 0.23
COL9A1-201ENST00000320755 ELOAQ14241 798 aaKnown RBP16.52■□□□□ 0.23
COL9A1-201ENST00000320755 SAXO2Q658L1 398 aa16.52■□□□□ 0.23
COL9A1-201ENST00000320755 ZNF770Q6IQ21 691 aaPredicted RBP16.52■□□□□ 0.23
COL9A1-201ENST00000320755 KIAA1958Q8N8K9 716 aa16.52■□□□□ 0.23
COL9A1-201ENST00000320755 TMIEQ8NEW7 156 aa16.52■□□□□ 0.23
COL9A1-201ENST00000320755 SMG7Q92540 1137 aaKnown RBP16.52■□□□□ 0.23
COL9A1-201ENST00000320755 FERD3LQ96RJ6 166 aa16.52■□□□□ 0.23
COL9A1-201ENST00000320755 TREX2Q9BQ50 279 aaPredicted RBP16.52■□□□□ 0.23
COL9A1-201ENST00000320755 MVB12BQ9H7P6 319 aa16.52■□□□□ 0.23
COL9A1-201ENST00000320755 IMP3Q9NV31 184 aaKnown RBP16.52■□□□□ 0.23
COL9A1-201ENST00000320755 C14orf119Q9NWQ9 140 aa16.52■□□□□ 0.23
COL9A1-201ENST00000320755 PCDHGA3Q9Y5H0 932 aa16.52■□□□□ 0.23
COL9A1-201ENST00000320755 ALPK3Q96L96 1907 aa16.52■□□□□ 0.23
COL9A1-201ENST00000320755 APOL3O95236 402 aa16.51■□□□□ 0.23
COL9A1-201ENST00000320755 H1F0P07305 194 aaKnown RBP16.51■□□□□ 0.23
COL9A1-201ENST00000320755 ACP5P13686 325 aa16.51■□□□□ 0.23
COL9A1-201ENST00000320755 SPNP16150 400 aa16.51■□□□□ 0.23
COL9A1-201ENST00000320755 ELAVL4P26378 380 aaKnown RBP16.51■□□□□ 0.23
COL9A1-201ENST00000320755 UGT2B15P54855 530 aa16.51■□□□□ 0.23
COL9A1-201ENST00000320755 OLR1P78380 273 aa16.51■□□□□ 0.23
COL9A1-201ENST00000320755 HTRA4P83105 476 aaPredicted RBP16.51■□□□□ 0.23
COL9A1-201ENST00000320755 ZNF750Q32MQ0 723 aa16.51■□□□□ 0.23
COL9A1-201ENST00000320755 CASP12Q6UXS9 341 aa16.51■□□□□ 0.23
COL9A1-201ENST00000320755 CRELD1Q96HD1 420 aa16.51■□□□□ 0.23
COL9A1-201ENST00000320755 LINC00615Q96LM1 132 aaPredicted RBP16.51■□□□□ 0.23
COL9A1-201ENST00000320755 PRR14Q9BWN1 585 aa16.51■□□□□ 0.23
COL9A1-201ENST00000320755 LHX9Q9NQ69 397 aa16.51■□□□□ 0.23
COL9A1-201ENST00000320755 RBMX2Q9Y388 322 aaKnown RBP16.51■□□□□ 0.23
COL9A1-201ENST00000320755 A8MU76 341 aa16.51■□□□□ 0.23
COL9A1-201ENST00000320755 IL12RB1P42701 662 aa16.51■□□□□ 0.23
COL9A1-201ENST00000320755 XKP51811 444 aa16.51■□□□□ 0.23
COL9A1-201ENST00000320755 DPTQ07507 201 aa16.51■□□□□ 0.23
COL9A1-201ENST00000320755 EIF4HQ15056 248 aaKnown RBP16.51■□□□□ 0.23
COL9A1-201ENST00000320755 C1orf53Q5VUE5 145 aa16.51■□□□□ 0.23
COL9A1-201ENST00000320755 AGAP7PQ5VUJ5 663 aa16.51■□□□□ 0.23
COL9A1-201ENST00000320755 PAQR6Q6TCH4 344 aa16.51■□□□□ 0.23
COL9A1-201ENST00000320755 LRRTM4Q86VH4 590 aa16.51■□□□□ 0.23
COL9A1-201ENST00000320755 COMTD1Q86VU5 262 aa16.51■□□□□ 0.23
COL9A1-201ENST00000320755 SLC7A13Q8TCU3 470 aa16.51■□□□□ 0.23
COL9A1-201ENST00000320755 RAD9AQ99638 391 aa16.51■□□□□ 0.23
COL9A1-201ENST00000320755 SIRT3Q9NTG7 399 aaPredicted RBP16.51■□□□□ 0.23
COL9A1-201ENST00000320755 ICKQ9UPZ9 632 aa16.51■□□□□ 0.23
COL9A1-201ENST00000320755 WDR37Q9Y2I8 494 aa16.51■□□□□ 0.23
COL9A1-201ENST00000320755 LINC00854A0A1B0GVQ3 168 aa16.51■□□□□ 0.23
COL9A1-201ENST00000320755 SLC35G4P0C7Q5 338 aa16.51■□□□□ 0.23
COL9A1-201ENST00000320755 C8orf89P0DMQ9 161 aa16.51■□□□□ 0.23
COL9A1-201ENST00000320755 SSR2P43308 183 aa16.51■□□□□ 0.23
COL9A1-201ENST00000320755 MAGEA10P43363 369 aaPredicted RBP16.51■□□□□ 0.23
COL9A1-201ENST00000320755 CAMK1Q14012 370 aa16.51■□□□□ 0.23
COL9A1-201ENST00000320755 PNCKQ6P2M8 343 aa16.51■□□□□ 0.23
COL9A1-201ENST00000320755 OR5K2Q8NHB8 316 aa16.51■□□□□ 0.23
COL9A1-201ENST00000320755 ZNF707Q96C28 371 aaPredicted RBP16.51■□□□□ 0.23
COL9A1-201ENST00000320755 CEP19Q96LK0 163 aa16.51■□□□□ 0.23
COL9A1-201ENST00000320755 OR51I1Q9H343 314 aa16.51■□□□□ 0.23
COL9A1-201ENST00000320755 SERHL2Q9H4I8 314 aa16.51■□□□□ 0.23
COL9A1-201ENST00000320755 ZCCHC3Q9NUD5 404 aaKnown RBP16.51■□□□□ 0.23
COL9A1-201ENST00000320755 ERVK13-1Q9NX77 482 aa16.51■□□□□ 0.23
COL9A1-201ENST00000320755 LTBP2Q14767 1821 aa16.5■□□□□ 0.23
COL9A1-201ENST00000320755 NDUFS4O43181 175 aa16.5■□□□□ 0.23
COL9A1-201ENST00000320755 GPX5O75715 221 aa16.5■□□□□ 0.23
COL9A1-201ENST00000320755 OSMP13725 252 aa16.5■□□□□ 0.23
COL9A1-201ENST00000320755 MYOGP15173 224 aa16.5■□□□□ 0.23
COL9A1-201ENST00000320755 CD72P21854 359 aa16.5■□□□□ 0.23
COL9A1-201ENST00000320755 IRF3Q14653 427 aa16.5■□□□□ 0.23
COL9A1-201ENST00000320755 SSX1Q16384 188 aa16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 1495.7 ms