RNA–Protein interactions for RNA: ENST00000295324.3

CDC42EP3-201, Transcript of CDC42 effector protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42EP3, Length 5,700 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3-201ENST00000295324 PAK6Q9NQU5 681 aaPredicted RBP16.91■□□□□ 0.3
CDC42EP3-201ENST00000295324 HPF1Q9NWY4 346 aa16.91■□□□□ 0.3
CDC42EP3-201ENST00000295324 THAP10Q9P2Z0 257 aaPredicted RBP16.91■□□□□ 0.3
CDC42EP3-201ENST00000295324 AP1M2Q9Y6Q5 423 aa16.91■□□□□ 0.3
CDC42EP3-201ENST00000295324 CIB4A0PJX0 185 aa16.91■□□□□ 0.3
CDC42EP3-201ENST00000295324 EDNRAP25101 427 aa16.91■□□□□ 0.3
CDC42EP3-201ENST00000295324 CTHP32929 405 aa16.91■□□□□ 0.3
CDC42EP3-201ENST00000295324 EIF1AXP47813 144 aaKnown RBP16.91■□□□□ 0.3
CDC42EP3-201ENST00000295324 PGGT1BP53609 377 aa16.91■□□□□ 0.3
CDC42EP3-201ENST00000295324 DUS1LQ6P1R4 473 aaKnown RBP16.91■□□□□ 0.3
CDC42EP3-201ENST00000295324 LARP4Q71RC2 724 aaKnown RBP eCLIP16.91■□□□□ 0.3
CDC42EP3-201ENST00000295324 GPN1Q9HCN4 374 aaPredicted RBP16.91■□□□□ 0.3
CDC42EP3-201ENST00000295324 MYH7P12883 1935 aa16.9■□□□□ 0.3
CDC42EP3-201ENST00000295324 TOGARAM1Q9Y4F4 1720 aa16.9■□□□□ 0.3
CDC42EP3-201ENST00000295324 FAM240BA0A1B0GVZ2 78 aa16.9■□□□□ 0.3
CDC42EP3-201ENST00000295324 CXCL10P02778 98 aa16.9■□□□□ 0.3
CDC42EP3-201ENST00000295324 RGRP47804 291 aa16.9■□□□□ 0.3
CDC42EP3-201ENST00000295324 AKR1D1P51857 326 aa16.9■□□□□ 0.3
CDC42EP3-201ENST00000295324 CTSCP53634 463 aa16.9■□□□□ 0.3
CDC42EP3-201ENST00000295324 MXD1Q05195 221 aa16.9■□□□□ 0.3
CDC42EP3-201ENST00000295324 TUBB3Q13509 450 aa16.9■□□□□ 0.3
CDC42EP3-201ENST00000295324 RNASE12Q5GAN4 147 aaKnown RBP16.9■□□□□ 0.3
CDC42EP3-201ENST00000295324 ZBTB46Q86UZ6 589 aa16.9■□□□□ 0.3
CDC42EP3-201ENST00000295324 TRIM43Q96BQ3 446 aaPredicted RBP16.9■□□□□ 0.3
CDC42EP3-201ENST00000295324 POT1Q9NUX5 634 aa16.9■□□□□ 0.3
CDC42EP3-201ENST00000295324 A0A1B0GTW7 788 aa16.9■□□□□ 0.3
CDC42EP3-201ENST00000295324 VSTM2BA6NLU5 285 aa16.9■□□□□ 0.3
CDC42EP3-201ENST00000295324 AURKAO14965 403 aa16.9■□□□□ 0.3
CDC42EP3-201ENST00000295324 NUAK1O60285 661 aa16.9■□□□□ 0.3
CDC42EP3-201ENST00000295324 FMO3P31513 532 aa16.9■□□□□ 0.3
CDC42EP3-201ENST00000295324 MSANTD1Q6ZTZ1 278 aa16.9■□□□□ 0.3
CDC42EP3-201ENST00000295324 CCDC80Q76M96 950 aa16.9■□□□□ 0.3
CDC42EP3-201ENST00000295324 OR7G3Q8NG95 312 aa16.9■□□□□ 0.3
CDC42EP3-201ENST00000295324 ELSPBP1Q96BH3 223 aa16.9■□□□□ 0.3
CDC42EP3-201ENST00000295324 ZNF304Q9HCX3 659 aa16.9■□□□□ 0.3
CDC42EP3-201ENST00000295324 YKT6O15498 198 aa16.9■□□□□ 0.3
CDC42EP3-201ENST00000295324 SLC15A1P46059 708 aa16.9■□□□□ 0.3
CDC42EP3-201ENST00000295324 ARHGDIBP52566 201 aa16.9■□□□□ 0.3
CDC42EP3-201ENST00000295324 OR2B6P58173 313 aa16.9■□□□□ 0.3
CDC42EP3-201ENST00000295324 RIN1Q13671 783 aa16.9■□□□□ 0.3
CDC42EP3-201ENST00000295324 PLET1Q6UQ28 207 aa16.9■□□□□ 0.3
CDC42EP3-201ENST00000295324 OR10Q1Q8NGQ4 319 aa16.9■□□□□ 0.3
CDC42EP3-201ENST00000295324 CXorf21Q9HAI6 301 aa16.9■□□□□ 0.3
CDC42EP3-201ENST00000295324 TRIM36Q9NQ86 728 aa16.9■□□□□ 0.3
CDC42EP3-201ENST00000295324 MYH8P13535 1937 aa16.9■□□□□ 0.3
CDC42EP3-201ENST00000295324 A0A0U1RQS6 177 aa16.9■□□□□ 0.3
CDC42EP3-201ENST00000295324 WRBO00258 174 aa16.9■□□□□ 0.3
CDC42EP3-201ENST00000295324 TLX2O43763 284 aaPredicted RBP16.9■□□□□ 0.3
CDC42EP3-201ENST00000295324 RPP14O95059 124 aaKnown RBP16.9■□□□□ 0.3
CDC42EP3-201ENST00000295324 CHRM5P08912 532 aaPredicted RBP16.9■□□□□ 0.3
CDC42EP3-201ENST00000295324 EIF2DP41214 584 aaKnown RBP16.9■□□□□ 0.3
CDC42EP3-201ENST00000295324 FOXK1P85037 733 aa16.9■□□□□ 0.3
CDC42EP3-201ENST00000295324 PPP1R8Q12972 351 aaKnown RBP16.9■□□□□ 0.3
CDC42EP3-201ENST00000295324 BTBD16Q32M84 506 aa16.9■□□□□ 0.3
CDC42EP3-201ENST00000295324 FIP1L1Q6UN15 594 aaKnown RBP16.9■□□□□ 0.3
CDC42EP3-201ENST00000295324 GALNTL5Q7Z4T8 443 aa16.9■□□□□ 0.3
CDC42EP3-201ENST00000295324 ZSCAN4Q8NAM6 433 aaPredicted RBP16.9■□□□□ 0.3
CDC42EP3-201ENST00000295324 PCDHGB2Q9Y5G2 931 aa16.9■□□□□ 0.3
CDC42EP3-201ENST00000295324 RAB36O95755 333 aa16.89■□□□□ 0.3
CDC42EP3-201ENST00000295324 PENKP01210 267 aaPredicted RBP16.89■□□□□ 0.3
CDC42EP3-201ENST00000295324 PRLHRP49683 370 aa16.89■□□□□ 0.3
CDC42EP3-201ENST00000295324 AFF3P51826 1226 aaKnown RBP16.89■□□□□ 0.3
CDC42EP3-201ENST00000295324 OR12D2P58182 307 aa16.89■□□□□ 0.3
CDC42EP3-201ENST00000295324 ROR2Q01974 943 aaKnown RBP16.89■□□□□ 0.3
CDC42EP3-201ENST00000295324 CDKN3Q16667 212 aa16.89■□□□□ 0.3
CDC42EP3-201ENST00000295324 RBM48Q5RL73 367 aaKnown RBP16.89■□□□□ 0.3
CDC42EP3-201ENST00000295324 MCATQ8IVS2 390 aaKnown RBP16.89■□□□□ 0.3
CDC42EP3-201ENST00000295324 AQP9O43315 295 aa16.89■□□□□ 0.29
CDC42EP3-201ENST00000295324 MAGEA6P43360 314 aa16.89■□□□□ 0.29
CDC42EP3-201ENST00000295324 KANK2Q63ZY3 851 aa16.89■□□□□ 0.29
CDC42EP3-201ENST00000295324 RPL13AP3Q6NVV1 102 aa16.89■□□□□ 0.29
CDC42EP3-201ENST00000295324 PGBD2Q6P3X8 592 aa16.89■□□□□ 0.29
CDC42EP3-201ENST00000295324 ERMP1Q7Z2K6 904 aa16.89■□□□□ 0.29
CDC42EP3-201ENST00000295324 DENND6BQ8NEG7 585 aa16.89■□□□□ 0.29
CDC42EP3-201ENST00000295324 GAL3ST3Q96A11 431 aa16.89■□□□□ 0.29
CDC42EP3-201ENST00000295324 DOHHQ9BU89 302 aa16.89■□□□□ 0.29
CDC42EP3-201ENST00000295324 TAAR2Q9P1P5 351 aa16.89■□□□□ 0.29
CDC42EP3-201ENST00000295324 DNAJC15Q9Y5T4 150 aa16.89■□□□□ 0.29
CDC42EP3-201ENST00000295324 SLC9B1P1A6NJY1 282 aa16.89■□□□□ 0.29
CDC42EP3-201ENST00000295324 ZNF99A8MXY4 864 aaPredicted RBP16.89■□□□□ 0.29
CDC42EP3-201ENST00000295324 CSTBP04080 98 aaKnown RBP16.89■□□□□ 0.29
CDC42EP3-201ENST00000295324 HSPBAP1Q96EW2 488 aa16.89■□□□□ 0.29
CDC42EP3-201ENST00000295324 BRF2Q9HAW0 419 aa16.89■□□□□ 0.29
CDC42EP3-201ENST00000295324 EURLQ9NYK6 297 aa16.89■□□□□ 0.29
CDC42EP3-201ENST00000295324 PEX16Q9Y5Y5 336 aa16.89■□□□□ 0.29
CDC42EP3-201ENST00000295324 SCN7AQ01118 1682 aa16.89■□□□□ 0.29
CDC42EP3-201ENST00000295324 CDC40O60508 579 aaKnown RBP eCLIP16.89■□□□□ 0.29
CDC42EP3-201ENST00000295324 CBFA2T3O75081 653 aa16.89■□□□□ 0.29
CDC42EP3-201ENST00000295324 ERVPABLB-1P60509 514 aa16.89■□□□□ 0.29
CDC42EP3-201ENST00000295324 ZNF789Q5FWF6 425 aa16.89■□□□□ 0.29
CDC42EP3-201ENST00000295324 UTS2BQ765I0 119 aa16.89■□□□□ 0.29
CDC42EP3-201ENST00000295324 ALOXE3Q9BYJ1 711 aa16.89■□□□□ 0.29
CDC42EP3-201ENST00000295324 YTHDF1Q9BYJ9 559 aaKnown RBP16.89■□□□□ 0.29
CDC42EP3-201ENST00000295324 RHCGQ9UBD6 479 aa16.89■□□□□ 0.29
CDC42EP3-201ENST00000295324 SH3PXD2BA1X283 911 aa16.89■□□□□ 0.29
CDC42EP3-201ENST00000295324 ZNF879B4DU55 563 aa16.89■□□□□ 0.29
CDC42EP3-201ENST00000295324 PRLP01236 227 aa16.89■□□□□ 0.29
CDC42EP3-201ENST00000295324 CBLP22681 906 aa16.89■□□□□ 0.29
CDC42EP3-201ENST00000295324 KDELR2P33947 212 aa16.89■□□□□ 0.29
CDC42EP3-201ENST00000295324 EID2Q8N6I1 236 aa16.89■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 72.4 ms