RNA–Protein interactions for RNA: ENST00000292476.9

CPSF4-201, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CPSF4, Length 1,691 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-201ENST00000292476 ATP6V1HQ9UI12 483 aa15.94■□□□□ 0.14
CPSF4-201ENST00000292476 WDR87Q6ZQQ6 2873 aa15.94■□□□□ 0.14
CPSF4-201ENST00000292476 IGKV1-8A0A0C4DH67 115 aa15.93■□□□□ 0.14
CPSF4-201ENST00000292476 BTN3A3O00478 584 aa15.93■□□□□ 0.14
CPSF4-201ENST00000292476 ZW10O43264 779 aa15.93■□□□□ 0.14
CPSF4-201ENST00000292476 B3GALT4O96024 378 aa15.93■□□□□ 0.14
CPSF4-201ENST00000292476 ZNF12P17014 697 aa15.93■□□□□ 0.14
CPSF4-201ENST00000292476 PRKACGP22612 351 aa15.93■□□□□ 0.14
CPSF4-201ENST00000292476 DAPP51397 102 aa15.93■□□□□ 0.14
CPSF4-201ENST00000292476 RAE1P78406 368 aaKnown RBP15.93■□□□□ 0.14
CPSF4-201ENST00000292476 RAPSNQ13702 412 aa15.93■□□□□ 0.14
CPSF4-201ENST00000292476 C16orf72Q14CZ0 275 aa15.93■□□□□ 0.14
CPSF4-201ENST00000292476 SLC5A12Q1EHB4 618 aa15.93■□□□□ 0.14
CPSF4-201ENST00000292476 PMS2CLQ68D20 193 aa15.93■□□□□ 0.14
CPSF4-201ENST00000292476 ADNP2Q6IQ32 1131 aa15.93■□□□□ 0.14
CPSF4-201ENST00000292476 ZNF425Q6IV72 752 aa15.93■□□□□ 0.14
CPSF4-201ENST00000292476 ARMC6Q6NXE6 501 aa15.93■□□□□ 0.14
CPSF4-201ENST00000292476 FAHD1Q6P587 224 aa15.93■□□□□ 0.14
CPSF4-201ENST00000292476 ARMCX6Q7L4S7 300 aa15.93■□□□□ 0.14
CPSF4-201ENST00000292476 TSPYL5Q86VY4 417 aaPredicted RBP15.93■□□□□ 0.14
CPSF4-201ENST00000292476 CYP4Z1Q86W10 505 aa15.93■□□□□ 0.14
CPSF4-201ENST00000292476 OOSP2Q86WS3 158 aa15.93■□□□□ 0.14
CPSF4-201ENST00000292476 ANKRD53Q8N9V6 530 aa15.93■□□□□ 0.14
CPSF4-201ENST00000292476 MIPOL1Q8TD10 442 aa15.93■□□□□ 0.14
CPSF4-201ENST00000292476 HSH2DQ96JZ2 352 aa15.93■□□□□ 0.14
CPSF4-201ENST00000292476 ZC3H10Q96K80 434 aaKnown RBP15.93■□□□□ 0.14
CPSF4-201ENST00000292476 DUSP21Q9H596 190 aa15.93■□□□□ 0.14
CPSF4-201ENST00000292476 REEP1Q9H902 201 aa15.93■□□□□ 0.14
CPSF4-201ENST00000292476 SLC6A20Q9NP91 592 aa15.93■□□□□ 0.14
CPSF4-201ENST00000292476 ADPRHL2Q9NX46 363 aa15.93■□□□□ 0.14
CPSF4-201ENST00000292476 SCN3BQ9NY72 215 aa15.93■□□□□ 0.14
CPSF4-201ENST00000292476 ACTR10Q9NZ32 417 aa15.93■□□□□ 0.14
CPSF4-201ENST00000292476 NDRG4Q9ULP0 352 aaKnown RBP15.93■□□□□ 0.14
CPSF4-201ENST00000292476 VPS4AQ9UN37 437 aa15.93■□□□□ 0.14
CPSF4-201ENST00000292476 PADI2Q9Y2J8 665 aa15.93■□□□□ 0.14
CPSF4-201ENST00000292476 SLCO1B1Q9Y6L6 691 aa15.93■□□□□ 0.14
CPSF4-201ENST00000292476 CEP192Q8TEP8 1941 aa15.93■□□□□ 0.14
CPSF4-201ENST00000292476 RALGAPA1Q6GYQ0 2036 aa15.93■□□□□ 0.14
CPSF4-201ENST00000292476 PTPRZ1P23471 2315 aaPredicted RBP15.92■□□□□ 0.14
CPSF4-201ENST00000292476 FEZF1A0PJY2 475 aa15.92■□□□□ 0.14
CPSF4-201ENST00000292476 OR6C74A6NCV1 312 aa15.92■□□□□ 0.14
CPSF4-201ENST00000292476 ZNF99A8MXY4 864 aaPredicted RBP15.92■□□□□ 0.14
CPSF4-201ENST00000292476 LMO7DNF2Z398 122 aa15.92■□□□□ 0.14
CPSF4-201ENST00000292476 AQP9O43315 295 aa15.92■□□□□ 0.14
CPSF4-201ENST00000292476 TNFSF14O43557 240 aa15.92■□□□□ 0.14
CPSF4-201ENST00000292476 PFDN1O60925 122 aa15.92■□□□□ 0.14
CPSF4-201ENST00000292476 CLPXO76031 633 aa15.92■□□□□ 0.14
CPSF4-201ENST00000292476 C9P02748 559 aa15.92■□□□□ 0.14
CPSF4-201ENST00000292476 LAMP1P11279 417 aa15.92■□□□□ 0.14
CPSF4-201ENST00000292476 AGXTP21549 392 aa15.92■□□□□ 0.14
CPSF4-201ENST00000292476 PEBP1P30086 187 aaKnown RBP15.92■□□□□ 0.14
CPSF4-201ENST00000292476 FASLGP48023 281 aa15.92■□□□□ 0.14
CPSF4-201ENST00000292476 DHPSP49366 369 aaPredicted RBP15.92■□□□□ 0.14
CPSF4-201ENST00000292476 IL5RAQ01344 420 aa15.92■□□□□ 0.14
CPSF4-201ENST00000292476 TGM3Q08188 693 aa15.92■□□□□ 0.14
CPSF4-201ENST00000292476 LYSMD4Q5XG99 296 aa15.92■□□□□ 0.14
CPSF4-201ENST00000292476 VN1R5Q7Z5H4 357 aa15.92■□□□□ 0.14
CPSF4-201ENST00000292476 SVOPQ8N4V2 548 aa15.92■□□□□ 0.14
CPSF4-201ENST00000292476 NATD1Q8N6N6 113 aa15.92■□□□□ 0.14
CPSF4-201ENST00000292476 MFSD9Q8NBP5 474 aa15.92■□□□□ 0.14
CPSF4-201ENST00000292476 BPIFB6Q8NFQ5 453 aa15.92■□□□□ 0.14
CPSF4-201ENST00000292476 ZFP90Q8TF47 636 aa15.92■□□□□ 0.14
CPSF4-201ENST00000292476 TRUB1Q8WWH5 349 aaKnown RBP15.92■□□□□ 0.14
CPSF4-201ENST00000292476 NRTNQ99748 197 aa15.92■□□□□ 0.14
CPSF4-201ENST00000292476 MYNNQ9NPC7 610 aa15.92■□□□□ 0.14
CPSF4-201ENST00000292476 B3GNT3Q9Y2A9 372 aa15.92■□□□□ 0.14
CPSF4-201ENST00000292476 SAMHD1Q9Y3Z3 626 aaKnown RBP15.92■□□□□ 0.14
CPSF4-201ENST00000292476 KLK4Q9Y5K2 254 aa15.92■□□□□ 0.14
CPSF4-201ENST00000292476 U3KQV3 271 aa15.92■□□□□ 0.14
CPSF4-201ENST00000292476 GSAPA4D1B5 854 aa15.92■□□□□ 0.14
CPSF4-201ENST00000292476 GABRR3A8MPY1 467 aa15.92■□□□□ 0.14
CPSF4-201ENST00000292476 B4DGG1 531 aa15.92■□□□□ 0.14
CPSF4-201ENST00000292476 ACVR2AP27037 513 aa15.92■□□□□ 0.14
CPSF4-201ENST00000292476 TSFMP43897 325 aaKnown RBP15.92■□□□□ 0.14
CPSF4-201ENST00000292476 TRA2BP62995 288 aaKnown RBP15.92■□□□□ 0.14
CPSF4-201ENST00000292476 SLC35A2P78381 396 aa15.92■□□□□ 0.14
CPSF4-201ENST00000292476 VLDLRP98155 873 aa15.92■□□□□ 0.14
CPSF4-201ENST00000292476 RBBP4Q09028 425 aa15.92■□□□□ 0.14
CPSF4-201ENST00000292476 SPEM2Q0P670 501 aa15.92■□□□□ 0.14
CPSF4-201ENST00000292476 KIAA1614Q5VZ46 1190 aa15.92■□□□□ 0.14
CPSF4-201ENST00000292476 ANKRD34AQ69YU3 496 aa15.92■□□□□ 0.14
CPSF4-201ENST00000292476 NUDT13Q86X67 352 aa15.92■□□□□ 0.14
CPSF4-201ENST00000292476 ZC3H7AQ8IWR0 971 aaKnown RBP15.92■□□□□ 0.14
CPSF4-201ENST00000292476 CLECL1Q8IZS7 167 aa15.92■□□□□ 0.14
CPSF4-201ENST00000292476 C11orf65Q8NCR3 313 aa15.92■□□□□ 0.14
CPSF4-201ENST00000292476 IPCEF1Q8WWN9 437 aaPredicted RBP15.92■□□□□ 0.14
CPSF4-201ENST00000292476 TANKQ92844 425 aa15.92■□□□□ 0.14
CPSF4-201ENST00000292476 OR2A14Q96R47 310 aa15.92■□□□□ 0.14
CPSF4-201ENST00000292476 FUNDC2Q9BWH2 189 aa15.92■□□□□ 0.14
CPSF4-201ENST00000292476 ARRDC1-AS1Q9H2J1 176 aa15.92■□□□□ 0.14
CPSF4-201ENST00000292476 PAK1IP1Q9NWT1 392 aaPredicted RBP15.92■□□□□ 0.14
CPSF4-201ENST00000292476 HRASLS2Q9NWW9 162 aa15.92■□□□□ 0.14
CPSF4-201ENST00000292476 GMPPBQ9Y5P6 360 aa15.92■□□□□ 0.14
CPSF4-201ENST00000292476 CSNK1G3Q9Y6M4 447 aa15.92■□□□□ 0.14
CPSF4-201ENST00000292476 CAPN5O15484 640 aaPredicted RBP15.91■□□□□ 0.14
CPSF4-201ENST00000292476 NDUFS4O43181 175 aa15.91■□□□□ 0.14
CPSF4-201ENST00000292476 SH3BGRLO75368 114 aa15.91■□□□□ 0.14
CPSF4-201ENST00000292476 GABARAPO95166 117 aa15.91■□□□□ 0.14
CPSF4-201ENST00000292476 CPSF4O95639 269 aaKnown RBP15.91■□□□□ 0.14
CPSF4-201ENST00000292476 CELA2BP08218 269 aaPredicted RBP15.91■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms