RNA–Protein interactions for RNA: ENST00000262901.4

SIM1-201, Transcript of SIM bHLH transcription factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIM1, Length 3,999 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIM1-201ENST00000262901 LHX3Q9UBR4 397 aa9.14□□□□□ -0.95
SIM1-201ENST00000262901 PCTPQ9UKL6 214 aa9.14□□□□□ -0.95
SIM1-201ENST00000262901 OR10H1Q9Y4A9 318 aa9.14□□□□□ -0.95
SIM1-201ENST00000262901 SPIN1Q9Y657 262 aaPredicted RBP9.14□□□□□ -0.95
SIM1-201ENST00000262901 NLRC5Q86WI3 1866 aa9.13□□□□□ -0.95
SIM1-201ENST00000262901 PRSS51A0A1B0GVH4 220 aa9.13□□□□□ -0.95
SIM1-201ENST00000262901 FAM172BPA6NC97 362 aa9.13□□□□□ -0.95
SIM1-201ENST00000262901 SLC31A1O15431 190 aa9.13□□□□□ -0.95
SIM1-201ENST00000262901 TMEM127O75204 238 aa9.13□□□□□ -0.95
SIM1-201ENST00000262901 RASGRP1O95267 797 aa9.13□□□□□ -0.95
SIM1-201ENST00000262901 BPNT1O95861 308 aa9.13□□□□□ -0.95
SIM1-201ENST00000262901 PDYNP01213 254 aa9.13□□□□□ -0.95
SIM1-201ENST00000262901 HLA-DQA2P01906 255 aa9.13□□□□□ -0.95
SIM1-201ENST00000262901 MT-ND2P03891 347 aa9.13□□□□□ -0.95
SIM1-201ENST00000262901 ATP1B2P14415 290 aaPredicted RBP9.13□□□□□ -0.95
SIM1-201ENST00000262901 HOXB3P14651 431 aaPredicted RBP9.13□□□□□ -0.95
SIM1-201ENST00000262901 HTR1EP28566 365 aa9.13□□□□□ -0.95
SIM1-201ENST00000262901 TAS2R50P59544 299 aa9.13□□□□□ -0.95
SIM1-201ENST00000262901 EEF1A1P68104 462 aaKnown RBP9.13□□□□□ -0.95
SIM1-201ENST00000262901 CDK6Q00534 326 aa9.13□□□□□ -0.95
SIM1-201ENST00000262901 EEF1A2Q05639 463 aaKnown RBP9.13□□□□□ -0.95
SIM1-201ENST00000262901 TSTQ16762 297 aaKnown RBP9.13□□□□□ -0.95
SIM1-201ENST00000262901 DUOXA1Q1HG43 343 aa9.13□□□□□ -0.95
SIM1-201ENST00000262901 CRB2Q5IJ48 1285 aa9.13□□□□□ -0.95
SIM1-201ENST00000262901 EEF1A1P5Q5VTE0 462 aa9.13□□□□□ -0.95
SIM1-201ENST00000262901 Q7L0L9 218 aa9.13□□□□□ -0.95
SIM1-201ENST00000262901 GHDCQ8N2G8 530 aa9.13□□□□□ -0.95
SIM1-201ENST00000262901 OR13J1Q8NGT2 312 aa9.13□□□□□ -0.95
SIM1-201ENST00000262901 ZCCHC10Q8TBK6 192 aa9.13□□□□□ -0.95
SIM1-201ENST00000262901 MNTQ99583 582 aa9.13□□□□□ -0.95
SIM1-201ENST00000262901 OR51V1Q9H2C8 321 aa9.13□□□□□ -0.95
SIM1-201ENST00000262901 SDR39U1Q9NRG7 319 aaPredicted RBP9.13□□□□□ -0.95
SIM1-201ENST00000262901 INTS6Q9UL03 887 aaKnown RBP9.13□□□□□ -0.95
SIM1-201ENST00000262901 PTPRDP23468 1912 aa9.13□□□□□ -0.95
SIM1-201ENST00000262901 MAN2B1O00754 1011 aa9.13□□□□□ -0.95
SIM1-201ENST00000262901 MBTPS2O43462 519 aa9.13□□□□□ -0.95
SIM1-201ENST00000262901 SSNA1O43805 119 aa9.13□□□□□ -0.95
SIM1-201ENST00000262901 PTP4A3O75365 173 aa9.13□□□□□ -0.95
SIM1-201ENST00000262901 INHBBP09529 407 aa9.13□□□□□ -0.95
SIM1-201ENST00000262901 ALDOCP09972 364 aaKnown RBP9.13□□□□□ -0.95
SIM1-201ENST00000262901 RGRP47804 291 aa9.13□□□□□ -0.95
SIM1-201ENST00000262901 BMXP51813 675 aa9.13□□□□□ -0.95
SIM1-201ENST00000262901 ELAVL3Q14576 367 aaKnown RBP9.13□□□□□ -0.95
SIM1-201ENST00000262901 TPRG1LQ5T0D9 272 aa9.13□□□□□ -0.95
SIM1-201ENST00000262901 ZDHHC20Q5W0Z9 365 aa9.13□□□□□ -0.95
SIM1-201ENST00000262901 NOXRED1Q6NXP6 359 aa9.13□□□□□ -0.95
SIM1-201ENST00000262901 MZT2AQ6P582 158 aa9.13□□□□□ -0.95
SIM1-201ENST00000262901 IKBIPQ70UQ0 350 aa9.13□□□□□ -0.95
SIM1-201ENST00000262901 PIWIL3Q7Z3Z3 882 aaKnown RBP9.13□□□□□ -0.95
SIM1-201ENST00000262901 TSPAN33Q86UF1 283 aa9.13□□□□□ -0.95
SIM1-201ENST00000262901 ZSWIM9Q86XI8 627 aa9.13□□□□□ -0.95
SIM1-201ENST00000262901 FAM129CQ86XR2 697 aa9.13□□□□□ -0.95
SIM1-201ENST00000262901 PGBD5Q8N414 524 aa9.13□□□□□ -0.95
SIM1-201ENST00000262901 ZNF433Q8N7K0 673 aaPredicted RBP9.13□□□□□ -0.95
SIM1-201ENST00000262901 ANKFN1Q8N957 763 aa9.13□□□□□ -0.95
SIM1-201ENST00000262901 SLC38A4Q969I6 547 aa9.13□□□□□ -0.95
SIM1-201ENST00000262901 RSPRY1Q96DX4 576 aa9.13□□□□□ -0.95
SIM1-201ENST00000262901 HS6ST2Q96MM7 605 aa9.13□□□□□ -0.95
SIM1-201ENST00000262901 MCUBQ9NWR8 336 aa9.13□□□□□ -0.95
SIM1-201ENST00000262901 PPP1R14DQ9NXH3 145 aa9.13□□□□□ -0.95
SIM1-201ENST00000262901 PLAGL1Q9UM63 463 aa9.13□□□□□ -0.95
SIM1-201ENST00000262901 PEX16Q9Y5Y5 336 aa9.13□□□□□ -0.95
SIM1-201ENST00000262901 SAGE2PA6NJ88 616 aa9.13□□□□□ -0.95
SIM1-201ENST00000262901 PGRMC2O15173 223 aa9.13□□□□□ -0.95
SIM1-201ENST00000262901 C6orf47O95873 294 aa9.13□□□□□ -0.95
SIM1-201ENST00000262901 TNFRSF1BP20333 461 aa9.13□□□□□ -0.95
SIM1-201ENST00000262901 RAPSNQ13702 412 aa9.13□□□□□ -0.95
SIM1-201ENST00000262901 DDX59Q5T1V6 619 aaKnown RBP eCLIP9.13□□□□□ -0.95
SIM1-201ENST00000262901 LCN8Q6JVE9 175 aa9.13□□□□□ -0.95
SIM1-201ENST00000262901 CFAP161Q6P656 301 aa9.13□□□□□ -0.95
SIM1-201ENST00000262901 ZNF438Q7Z4V0 828 aa9.13□□□□□ -0.95
SIM1-201ENST00000262901 CDH24Q86UP0 819 aa9.13□□□□□ -0.95
SIM1-201ENST00000262901 C12orf57Q99622 126 aa9.13□□□□□ -0.95
SIM1-201ENST00000262901 BARD1Q99728 777 aaKnown RBP9.13□□□□□ -0.95
SIM1-201ENST00000262901 S1PR5Q9H228 398 aa9.13□□□□□ -0.95
SIM1-201ENST00000262901 C3orf14Q9HBI5 128 aa9.13□□□□□ -0.95
SIM1-201ENST00000262901 DNAJC27Q9NZQ0 273 aa9.13□□□□□ -0.95
SIM1-201ENST00000262901 VAPAQ9P0L0 249 aa9.13□□□□□ -0.95
SIM1-201ENST00000262901 CXorf51AA0A1B0GTR3 108 aa9.12□□□□□ -0.95
SIM1-201ENST00000262901 HMX3A6NHT5 357 aa9.12□□□□□ -0.95
SIM1-201ENST00000262901 GLOD5A6NK44 160 aa9.12□□□□□ -0.95
SIM1-201ENST00000262901 PLOD2O00469 737 aa9.12□□□□□ -0.95
SIM1-201ENST00000262901 SLC30A4O14863 429 aa9.12□□□□□ -0.95
SIM1-201ENST00000262901 GMFGO60234 142 aa9.12□□□□□ -0.95
SIM1-201ENST00000262901 HMGN1P05114 100 aa9.12□□□□□ -0.95
SIM1-201ENST00000262901 HSD17B1P14061 328 aa9.12□□□□□ -0.95
SIM1-201ENST00000262901 HOXB6P17509 224 aaKnown RBP9.12□□□□□ -0.95
SIM1-201ENST00000262901 DRD1P21728 446 aa9.12□□□□□ -0.95
SIM1-201ENST00000262901 GPX3P22352 226 aa9.12□□□□□ -0.95
SIM1-201ENST00000262901 NUDT1P36639 197 aa9.12□□□□□ -0.95
SIM1-201ENST00000262901 MAGEA3P43357 314 aa9.12□□□□□ -0.95
SIM1-201ENST00000262901 AVPR1BP47901 424 aa9.12□□□□□ -0.95
SIM1-201ENST00000262901 HLCSP50747 726 aa9.12□□□□□ -0.95
SIM1-201ENST00000262901 AP1S2P56377 157 aa9.12□□□□□ -0.95
SIM1-201ENST00000262901 CD47Q08722 323 aa9.12□□□□□ -0.95
SIM1-201ENST00000262901 BIKQ13323 160 aa9.12□□□□□ -0.95
SIM1-201ENST00000262901 KCNC3Q14003 757 aa9.12□□□□□ -0.95
SIM1-201ENST00000262901 OXA1LQ15070 435 aa9.12□□□□□ -0.95
SIM1-201ENST00000262901 CYBRD1Q53TN4 286 aa9.12□□□□□ -0.95
SIM1-201ENST00000262901 KCTD11Q693B1 232 aa9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms