RNA–Protein interactions for RNA: ENST00000258733.8

GPNMB-201, Transcript of glycoprotein nmb, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene GPNMB, Length 2,862 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-201ENST00000258733 OR2T7P0C7T2 308 aa7.4□□□□□ -1.23
GPNMB-201ENST00000258733 FCGR1AP12314 374 aa7.4□□□□□ -1.23
GPNMB-201ENST00000258733 NQO2P16083 231 aa7.4□□□□□ -1.23
GPNMB-201ENST00000258733 GDNFP39905 211 aa7.4□□□□□ -1.23
GPNMB-201ENST00000258733 NCS1P62166 190 aa7.4□□□□□ -1.23
GPNMB-201ENST00000258733 VLDLRP98155 873 aa7.4□□□□□ -1.23
GPNMB-201ENST00000258733 E2F1Q01094 437 aa7.4□□□□□ -1.23
GPNMB-201ENST00000258733 MC2RQ01718 297 aa7.4□□□□□ -1.23
GPNMB-201ENST00000258733 HYAL4Q2M3T9 481 aa7.4□□□□□ -1.23
GPNMB-201ENST00000258733 TM4SF20Q53R12 229 aa7.4□□□□□ -1.23
GPNMB-201ENST00000258733 COQ5Q5HYK3 327 aa7.4□□□□□ -1.23
GPNMB-201ENST00000258733 DCAF10Q5QP82 559 aa7.4□□□□□ -1.23
GPNMB-201ENST00000258733 ATG9BQ674R7 924 aa7.4□□□□□ -1.23
GPNMB-201ENST00000258733 NADSYN1Q6IA69 706 aa7.4□□□□□ -1.23
GPNMB-201ENST00000258733 SH2D5Q6ZV89 423 aa7.4□□□□□ -1.23
GPNMB-201ENST00000258733 CHSY1Q86X52 802 aa7.4□□□□□ -1.23
GPNMB-201ENST00000258733 PHF13Q86YI8 300 aaPredicted RBP7.4□□□□□ -1.23
GPNMB-201ENST00000258733 FOXRED2Q8IWF2 684 aa7.4□□□□□ -1.23
GPNMB-201ENST00000258733 FAM46DQ8NEK8 389 aa7.4□□□□□ -1.23
GPNMB-201ENST00000258733 DNAJB14Q8TBM8 379 aa7.4□□□□□ -1.23
GPNMB-201ENST00000258733 SPPL2AQ8TCT8 520 aa7.4□□□□□ -1.23
GPNMB-201ENST00000258733 SLC38A4Q969I6 547 aa7.4□□□□□ -1.23
GPNMB-201ENST00000258733 MRPS24Q96EL2 167 aaKnown RBP7.4□□□□□ -1.23
GPNMB-201ENST00000258733 GJD4Q96KN9 370 aaPredicted RBP7.4□□□□□ -1.23
GPNMB-201ENST00000258733 SDHCQ99643 169 aaPredicted RBP7.4□□□□□ -1.23
GPNMB-201ENST00000258733 KLHDC3Q9BQ90 382 aa7.4□□□□□ -1.23
GPNMB-201ENST00000258733 TMED9Q9BVK6 235 aa7.4□□□□□ -1.23
GPNMB-201ENST00000258733 ENKD1Q9H0I2 346 aa7.4□□□□□ -1.23
GPNMB-201ENST00000258733 TMEM8AQ9HCN3 771 aa7.4□□□□□ -1.23
GPNMB-201ENST00000258733 ADAP2Q9NPF8 381 aa7.4□□□□□ -1.23
GPNMB-201ENST00000258733 DECR2Q9NUI1 292 aa7.4□□□□□ -1.23
GPNMB-201ENST00000258733 RYDENQ9NUL5 291 aaKnown RBP7.4□□□□□ -1.23
GPNMB-201ENST00000258733 PARPBPQ9NWS1 579 aa7.4□□□□□ -1.23
GPNMB-201ENST00000258733 TMEM181Q9P2C4 612 aa7.4□□□□□ -1.23
GPNMB-201ENST00000258733 RAPGEFL1Q9UHV5 662 aa7.4□□□□□ -1.23
GPNMB-201ENST00000258733 SIX4Q9UIU6 781 aa7.4□□□□□ -1.23
GPNMB-201ENST00000258733 ZDHHC8Q9ULC8 765 aa7.4□□□□□ -1.23
GPNMB-201ENST00000258733 TBX20Q9UMR3 447 aa7.4□□□□□ -1.23
GPNMB-201ENST00000258733 OR2AG2A6NM03 316 aa7.39□□□□□ -1.23
GPNMB-201ENST00000258733 ERI2A8K979 691 aaKnown RBP7.39□□□□□ -1.23
GPNMB-201ENST00000258733 SYT5O00445 386 aa7.39□□□□□ -1.23
GPNMB-201ENST00000258733 PPIHO43447 177 aaKnown RBP7.39□□□□□ -1.23
GPNMB-201ENST00000258733 GALR2O43603 387 aaPredicted RBP7.39□□□□□ -1.23
GPNMB-201ENST00000258733 FGF19O95750 216 aa7.39□□□□□ -1.23
GPNMB-201ENST00000258733 FOLR2P14207 255 aa7.39□□□□□ -1.23
GPNMB-201ENST00000258733 TBXA2RP21731 343 aa7.39□□□□□ -1.23
GPNMB-201ENST00000258733 MAGEA6P43360 314 aa7.39□□□□□ -1.23
GPNMB-201ENST00000258733 GLUD2P49448 558 aa7.39□□□□□ -1.23
GPNMB-201ENST00000258733 CEBPDP49716 269 aaPredicted RBP7.39□□□□□ -1.23
GPNMB-201ENST00000258733 RGS6P49758 472 aa7.39□□□□□ -1.23
GPNMB-201ENST00000258733 ZNF143P52747 638 aaPredicted RBP7.39□□□□□ -1.23
GPNMB-201ENST00000258733 CTSCP53634 463 aa7.39□□□□□ -1.23
GPNMB-201ENST00000258733 AQP5P55064 265 aa7.39□□□□□ -1.23
GPNMB-201ENST00000258733 TLE2Q04725 743 aa7.39□□□□□ -1.23
GPNMB-201ENST00000258733 PPP3CAQ08209 521 aa7.39□□□□□ -1.23
GPNMB-201ENST00000258733 NHLRC3Q5JS37 347 aa7.39□□□□□ -1.23
GPNMB-201ENST00000258733 KHDRBS2Q5VWX1 349 aaKnown RBP7.39□□□□□ -1.23
GPNMB-201ENST00000258733 DHRS7BQ6IAN0 325 aaPredicted RBP7.39□□□□□ -1.23
GPNMB-201ENST00000258733 AFTPHQ6ULP2 937 aa7.39□□□□□ -1.23
GPNMB-201ENST00000258733 GDPD4Q6W3E5 623 aa7.39□□□□□ -1.23
GPNMB-201ENST00000258733 P2RY8Q86VZ1 359 aa7.39□□□□□ -1.23
GPNMB-201ENST00000258733 VPS37DQ86XT2 251 aa7.39□□□□□ -1.23
GPNMB-201ENST00000258733 RASGEF1AQ8N9B8 481 aa7.39□□□□□ -1.23
GPNMB-201ENST00000258733 NLGN4YQ8NFZ3 816 aaPredicted RBP7.39□□□□□ -1.23
GPNMB-201ENST00000258733 TFB1MQ8WVM0 346 aaKnown RBP7.39□□□□□ -1.23
GPNMB-201ENST00000258733 ZNF300Q96RE9 604 aaPredicted RBP7.39□□□□□ -1.23
GPNMB-201ENST00000258733 ZNF577Q9BSK1 485 aa7.39□□□□□ -1.23
GPNMB-201ENST00000258733 PRO1933Q9H354 126 aa7.39□□□□□ -1.23
GPNMB-201ENST00000258733 AGO4Q9HCK5 861 aaKnown RBP7.39□□□□□ -1.23
GPNMB-201ENST00000258733 ZDHHC3Q9NYG2 299 aa7.39□□□□□ -1.23
GPNMB-201ENST00000258733 HCN3Q9P1Z3 774 aa7.39□□□□□ -1.23
GPNMB-201ENST00000258733 IL17BQ9UHF5 180 aa7.39□□□□□ -1.23
GPNMB-201ENST00000258733 SLIT3O75094 1523 aa7.39□□□□□ -1.23
GPNMB-201ENST00000258733 ZNF716A6NP11 495 aa7.39□□□□□ -1.23
GPNMB-201ENST00000258733 ANKRD63C9JTQ0 380 aa7.39□□□□□ -1.23
GPNMB-201ENST00000258733 MYL12BO14950 172 aa7.39□□□□□ -1.23
GPNMB-201ENST00000258733 MBTPS2O43462 519 aa7.39□□□□□ -1.23
GPNMB-201ENST00000258733 RFPL1O75677 317 aa7.39□□□□□ -1.23
GPNMB-201ENST00000258733 PAPSS2O95340 614 aaPredicted RBP7.39□□□□□ -1.23
GPNMB-201ENST00000258733 CKMP06732 381 aa7.39□□□□□ -1.23
GPNMB-201ENST00000258733 MELTFP08582 738 aa7.39□□□□□ -1.23
GPNMB-201ENST00000258733 NBEAP1P0C6P0 100 aa7.39□□□□□ -1.23
GPNMB-201ENST00000258733 ZNF735P0CB33 412 aa7.39□□□□□ -1.23
GPNMB-201ENST00000258733 MYL12AP19105 171 aa7.39□□□□□ -1.23
GPNMB-201ENST00000258733 APEX1P27695 318 aaKnown RBP7.39□□□□□ -1.23
GPNMB-201ENST00000258733 ETV4P43268 484 aa7.39□□□□□ -1.23
GPNMB-201ENST00000258733 MAPK8P45983 427 aa7.39□□□□□ -1.23
GPNMB-201ENST00000258733 ZNF81P51508 661 aa7.39□□□□□ -1.23
GPNMB-201ENST00000258733 IDH3GP51553 393 aaPredicted RBP7.39□□□□□ -1.23
GPNMB-201ENST00000258733 CLCN7P51798 805 aa7.39□□□□□ -1.23
GPNMB-201ENST00000258733 SMSP52788 366 aa7.39□□□□□ -1.23
GPNMB-201ENST00000258733 GP2P55259 537 aaKnown RBP7.39□□□□□ -1.23
GPNMB-201ENST00000258733 MS4A2Q01362 244 aa7.39□□□□□ -1.23
GPNMB-201ENST00000258733 HYAL2Q12891 473 aa7.39□□□□□ -1.23
GPNMB-201ENST00000258733 LRRC32Q14392 662 aa7.39□□□□□ -1.23
GPNMB-201ENST00000258733 SURF2Q15527 256 aaPredicted RBP7.39□□□□□ -1.23
GPNMB-201ENST00000258733 UGT3A2Q3SY77 523 aa7.39□□□□□ -1.23
GPNMB-201ENST00000258733 ARSJQ5FYB0 599 aaPredicted RBP7.39□□□□□ -1.23
GPNMB-201ENST00000258733 RBM48Q5RL73 367 aaKnown RBP7.39□□□□□ -1.23
GPNMB-201ENST00000258733 ZNF470Q6ECI4 717 aa7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms