RNA–Protein interactions for RNA: ENST00000257604.9

TRAFD1-201, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

APPRIS P2 TSL 2 BASIC

Gene TRAFD1, Length 3,178 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-201ENST00000257604 SERPINA11Q86U17 422 aa13.91□□□□□ -0.18
TRAFD1-201ENST00000257604 METTL4Q8N3J2 472 aa13.91□□□□□ -0.18
TRAFD1-201ENST00000257604 ZNF540Q8NDQ6 660 aa13.91□□□□□ -0.18
TRAFD1-201ENST00000257604 RIPOR3Q96MK2 946 aa13.91□□□□□ -0.18
TRAFD1-201ENST00000257604 PRR14Q9BWN1 585 aa13.91□□□□□ -0.18
TRAFD1-201ENST00000257604 WDR12Q9GZL7 423 aaKnown RBP13.91□□□□□ -0.18
TRAFD1-201ENST00000257604 NDEL1Q9GZM8 345 aa13.91□□□□□ -0.18
TRAFD1-201ENST00000257604 STARD5Q9NSY2 213 aa13.91□□□□□ -0.18
TRAFD1-201ENST00000257604 RLIMQ9NVW2 624 aa13.91□□□□□ -0.18
TRAFD1-201ENST00000257604 SIRT5Q9NXA8 310 aa13.91□□□□□ -0.18
TRAFD1-201ENST00000257604 ZNF282Q9UDV7 671 aaPredicted RBP13.91□□□□□ -0.18
TRAFD1-201ENST00000257604 GRXCR2A6NFK2 248 aa13.9□□□□□ -0.18
TRAFD1-201ENST00000257604 SPNP16150 400 aa13.9□□□□□ -0.18
TRAFD1-201ENST00000257604 TYRP1P17643 537 aa13.9□□□□□ -0.18
TRAFD1-201ENST00000257604 CERS1P27544 350 aa13.9□□□□□ -0.18
TRAFD1-201ENST00000257604 RAB28P51157 221 aa13.9□□□□□ -0.18
TRAFD1-201ENST00000257604 C18orf63Q68DL7 685 aa13.9□□□□□ -0.18
TRAFD1-201ENST00000257604 UNC5DQ6UXZ4 953 aa13.9□□□□□ -0.18
TRAFD1-201ENST00000257604 TTC29Q8NA56 475 aaPredicted RBP13.9□□□□□ -0.18
TRAFD1-201ENST00000257604 TP53I13Q8NBR0 393 aaPredicted RBP13.9□□□□□ -0.18
TRAFD1-201ENST00000257604 STARD8Q92502 1023 aa13.9□□□□□ -0.18
TRAFD1-201ENST00000257604 UBE2E3Q969T4 207 aa13.9□□□□□ -0.18
TRAFD1-201ENST00000257604 MAGEB10Q96LZ2 347 aaPredicted RBP13.9□□□□□ -0.18
TRAFD1-201ENST00000257604 TCEAL2Q9H3H9 227 aaPredicted RBP13.9□□□□□ -0.18
TRAFD1-201ENST00000257604 IL1RAPQ9NPH3 570 aa13.9□□□□□ -0.18
TRAFD1-201ENST00000257604 BOLA1Q9Y3E2 137 aa13.9□□□□□ -0.18
TRAFD1-201ENST00000257604 A0A1W2PQF6 199 aa13.9□□□□□ -0.18
TRAFD1-201ENST00000257604 TNFRSF11BO00300 401 aa13.9□□□□□ -0.18
TRAFD1-201ENST00000257604 PGRMC2O15173 223 aa13.9□□□□□ -0.18
TRAFD1-201ENST00000257604 PDPK1O15530 556 aa13.9□□□□□ -0.18
TRAFD1-201ENST00000257604 MT-ND2P03891 347 aa13.9□□□□□ -0.18
TRAFD1-201ENST00000257604 CSNK1G2P78368 415 aa13.9□□□□□ -0.18
TRAFD1-201ENST00000257604 SLAMF1Q13291 335 aa13.9□□□□□ -0.18
TRAFD1-201ENST00000257604 DUSP7Q16829 419 aa13.9□□□□□ -0.18
TRAFD1-201ENST00000257604 NDUFAF5Q5TEU4 345 aa13.9□□□□□ -0.18
TRAFD1-201ENST00000257604 PLEKHG7Q6ZR37 379 aa13.9□□□□□ -0.18
TRAFD1-201ENST00000257604 MFSD4AQ8N468 514 aa13.9□□□□□ -0.18
TRAFD1-201ENST00000257604 SCAIQ8N9R8 606 aa13.9□□□□□ -0.18
TRAFD1-201ENST00000257604 PIK3C3Q8NEB9 887 aa13.9□□□□□ -0.18
TRAFD1-201ENST00000257604 MRGPRX1Q96LB2 322 aa13.9□□□□□ -0.18
TRAFD1-201ENST00000257604 ZBTB20Q9HC78 741 aaPredicted RBP13.9□□□□□ -0.18
TRAFD1-201ENST00000257604 CD207Q9UJ71 328 aa13.9□□□□□ -0.18
TRAFD1-201ENST00000257604 SLC28A2O43868 658 aa13.89□□□□□ -0.19
TRAFD1-201ENST00000257604 SSX4O60224 188 aa13.89□□□□□ -0.19
TRAFD1-201ENST00000257604 CYP7B1O75881 506 aa13.89□□□□□ -0.19
TRAFD1-201ENST00000257604 TBX6O95947 436 aaPredicted RBP13.89□□□□□ -0.19
TRAFD1-201ENST00000257604 HSMCR30P0CW71 290 aa13.89□□□□□ -0.19
TRAFD1-201ENST00000257604 OR12D1P0DN82 309 aa13.89□□□□□ -0.19
TRAFD1-201ENST00000257604 HSD3B1P14060 373 aa13.89□□□□□ -0.19
TRAFD1-201ENST00000257604 HSD3B2P26439 372 aa13.89□□□□□ -0.19
TRAFD1-201ENST00000257604 BCL6P41182 706 aa13.89□□□□□ -0.19
TRAFD1-201ENST00000257604 NCBP2P52298 156 aaKnown RBP eCLIP13.89□□□□□ -0.19
TRAFD1-201ENST00000257604 LASP1Q14847 261 aaKnown RBP13.89□□□□□ -0.19
TRAFD1-201ENST00000257604 TRIM40Q6P9F5 258 aa13.89□□□□□ -0.19
TRAFD1-201ENST00000257604 P2RY8Q86VZ1 359 aa13.89□□□□□ -0.19
TRAFD1-201ENST00000257604 RBM45Q8IUH3 476 aaKnown RBP13.89□□□□□ -0.19
TRAFD1-201ENST00000257604 CACTIN-AS1Q8N1I8 211 aa13.89□□□□□ -0.19
TRAFD1-201ENST00000257604 CHCHD4Q8N4Q1 142 aa13.89□□□□□ -0.19
TRAFD1-201ENST00000257604 HORMAD2Q8N7B1 307 aa13.89□□□□□ -0.19
TRAFD1-201ENST00000257604 OR2A1Q8NGT9 310 aa13.89□□□□□ -0.19
TRAFD1-201ENST00000257604 KAT2AQ92830 837 aa13.89□□□□□ -0.19
TRAFD1-201ENST00000257604 ELSPBP1Q96BH3 223 aa13.89□□□□□ -0.19
TRAFD1-201ENST00000257604 TEFMQ96QE5 360 aaKnown RBP13.89□□□□□ -0.19
TRAFD1-201ENST00000257604 ZCCHC3Q9NUD5 404 aaKnown RBP13.89□□□□□ -0.19
TRAFD1-201ENST00000257604 ASXL3Q9C0F0 2248 aa13.89□□□□□ -0.19
TRAFD1-201ENST00000257604 PRSS38A1L453 326 aa13.89□□□□□ -0.19
TRAFD1-201ENST00000257604 GPR37L1O60883 481 aa13.89□□□□□ -0.19
TRAFD1-201ENST00000257604 NDUFV2P19404 249 aa13.89□□□□□ -0.19
TRAFD1-201ENST00000257604 PRPH2P23942 346 aa13.89□□□□□ -0.19
TRAFD1-201ENST00000257604 MAOBP27338 520 aa13.89□□□□□ -0.19
TRAFD1-201ENST00000257604 CD6P30203 668 aa13.89□□□□□ -0.19
TRAFD1-201ENST00000257604 BTN3A2P78410 334 aa13.89□□□□□ -0.19
TRAFD1-201ENST00000257604 DGUOKQ16854 277 aa13.89□□□□□ -0.19
TRAFD1-201ENST00000257604 SPATS1Q496A3 300 aa13.89□□□□□ -0.19
TRAFD1-201ENST00000257604 ZNF658BQ4V348 819 aaPredicted RBP13.89□□□□□ -0.19
TRAFD1-201ENST00000257604 FAM71E1Q6IPT2 247 aa13.89□□□□□ -0.19
TRAFD1-201ENST00000257604 LCTLQ6UWM7 567 aa13.89□□□□□ -0.19
TRAFD1-201ENST00000257604 B3GNT8Q7Z7M8 397 aa13.89□□□□□ -0.19
TRAFD1-201ENST00000257604 LAS2Q8IYD9 372 aa13.89□□□□□ -0.19
TRAFD1-201ENST00000257604 TM4SF18Q96CE8 201 aa13.89□□□□□ -0.19
TRAFD1-201ENST00000257604 ITPKCQ96DU7 683 aa13.89□□□□□ -0.19
TRAFD1-201ENST00000257604 FEVQ99581 238 aa13.89□□□□□ -0.19
TRAFD1-201ENST00000257604 TEX101Q9BY14 249 aa13.89□□□□□ -0.19
TRAFD1-201ENST00000257604 SRMSQ9H3Y6 488 aa13.89□□□□□ -0.19
TRAFD1-201ENST00000257604 IGKV1-8A0A0C4DH67 115 aa13.89□□□□□ -0.19
TRAFD1-201ENST00000257604 A0A1W2PPV9 198 aa13.89□□□□□ -0.19
TRAFD1-201ENST00000257604 SOX14O95416 240 aa13.89□□□□□ -0.19
TRAFD1-201ENST00000257604 ALOX12P18054 663 aa13.89□□□□□ -0.19
TRAFD1-201ENST00000257604 CLK1P49759 484 aaKnown RBP13.89□□□□□ -0.19
TRAFD1-201ENST00000257604 CRYBA2P53672 197 aa13.89□□□□□ -0.19
TRAFD1-201ENST00000257604 SNRPNP63162 240 aaKnown RBP13.89□□□□□ -0.19
TRAFD1-201ENST00000257604 MVKQ03426 396 aa13.89□□□□□ -0.19
TRAFD1-201ENST00000257604 HEPACAMQ14CZ8 416 aa13.89□□□□□ -0.19
TRAFD1-201ENST00000257604 RPE65Q16518 533 aa13.89□□□□□ -0.19
TRAFD1-201ENST00000257604 TOR1AIP1Q5JTV8 583 aa13.89□□□□□ -0.19
TRAFD1-201ENST00000257604 KLHL17Q6TDP4 642 aa13.89□□□□□ -0.19
TRAFD1-201ENST00000257604 NUDT13Q86X67 352 aa13.89□□□□□ -0.19
TRAFD1-201ENST00000257604 SIX5Q8N196 739 aa13.89□□□□□ -0.19
TRAFD1-201ENST00000257604 LINC00615Q96LM1 132 aaPredicted RBP13.89□□□□□ -0.19
TRAFD1-201ENST00000257604 DMRTB1Q96MA1 342 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms