RNA–Protein interactions for RNA: ENST00000222275.2

UPK1A-201, Transcript of uroplakin 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UPK1A, Length 1,223 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1A-201ENST00000222275 VN1R1Q9GZP7 353 aa12.79□□□□□ -0.36
UPK1A-201ENST00000222275 SLCO1B3Q9NPD5 702 aa12.79□□□□□ -0.36
UPK1A-201ENST00000222275 LANCL2Q9NS86 450 aa12.79□□□□□ -0.36
UPK1A-201ENST00000222275 NOP53Q9NZM5 478 aaKnown RBP12.79□□□□□ -0.36
UPK1A-201ENST00000222275 MARCOQ9UEW3 520 aaPredicted RBP12.79□□□□□ -0.36
UPK1A-201ENST00000222275 ATG4BQ9Y4P1 393 aa12.79□□□□□ -0.36
UPK1A-201ENST00000222275 HS3ST3B1Q9Y662 390 aa12.79□□□□□ -0.36
UPK1A-201ENST00000222275 USH1CQ9Y6N9 552 aa12.79□□□□□ -0.36
UPK1A-201ENST00000222275 ATP6AP2A0A1C7CYW4 349 aa12.78□□□□□ -0.36
UPK1A-201ENST00000222275 EDF1O60869 148 aaKnown RBP12.78□□□□□ -0.36
UPK1A-201ENST00000222275 DNAJB6O75190 326 aa12.78□□□□□ -0.36
UPK1A-201ENST00000222275 ATP6AP2O75787 350 aa12.78□□□□□ -0.36
UPK1A-201ENST00000222275 GBAP04062 536 aa12.78□□□□□ -0.36
UPK1A-201ENST00000222275 TROVE2P10155 538 aaKnown RBP eCLIP12.78□□□□□ -0.36
UPK1A-201ENST00000222275 HNRNPH2P55795 449 aaKnown RBP12.78□□□□□ -0.36
UPK1A-201ENST00000222275 TAS2R50P59544 299 aa12.78□□□□□ -0.36
UPK1A-201ENST00000222275 ERVK-8P63133 956 aa12.78□□□□□ -0.36
UPK1A-201ENST00000222275 IRX1P78414 480 aaPredicted RBP12.78□□□□□ -0.36
UPK1A-201ENST00000222275 RHAGQ02094 409 aa12.78□□□□□ -0.36
UPK1A-201ENST00000222275 RFTN2Q52LD8 501 aaPredicted RBP12.78□□□□□ -0.36
UPK1A-201ENST00000222275 NDUFAF5Q5TEU4 345 aa12.78□□□□□ -0.36
UPK1A-201ENST00000222275 OGFOD2Q6N063 350 aa12.78□□□□□ -0.36
UPK1A-201ENST00000222275 JMJD6Q6NYC1 403 aaPredicted RBP12.78□□□□□ -0.36
UPK1A-201ENST00000222275 TMEM205Q6UW68 189 aa12.78□□□□□ -0.36
UPK1A-201ENST00000222275 FAM47EQ6ZV65 393 aa12.78□□□□□ -0.36
UPK1A-201ENST00000222275 SPATA19Q7Z5L4 167 aa12.78□□□□□ -0.36
UPK1A-201ENST00000222275 SCUBE1Q8IWY4 988 aa12.78□□□□□ -0.36
UPK1A-201ENST00000222275 GALNT16Q8N428 558 aa12.78□□□□□ -0.36
UPK1A-201ENST00000222275 FAM47BQ8NA70 645 aa12.78□□□□□ -0.36
UPK1A-201ENST00000222275 CEP70Q8NHQ1 597 aa12.78□□□□□ -0.36
UPK1A-201ENST00000222275 ACTRT2Q8TDY3 377 aa12.78□□□□□ -0.36
UPK1A-201ENST00000222275 C16orf78Q8WTQ4 265 aa12.78□□□□□ -0.36
UPK1A-201ENST00000222275 TM4SF18Q96CE8 201 aa12.78□□□□□ -0.36
UPK1A-201ENST00000222275 FCRL1Q96LA6 429 aa12.78□□□□□ -0.36
UPK1A-201ENST00000222275 C3orf30Q96M34 536 aa12.78□□□□□ -0.36
UPK1A-201ENST00000222275 AKTIPQ9H8T0 292 aa12.78□□□□□ -0.36
UPK1A-201ENST00000222275 MYNNQ9NPC7 610 aa12.78□□□□□ -0.36
UPK1A-201ENST00000222275 ASIC5Q9NY37 505 aa12.78□□□□□ -0.36
UPK1A-201ENST00000222275 EHD3Q9NZN3 535 aa12.78□□□□□ -0.36
UPK1A-201ENST00000222275 DLGAP4Q9Y2H0 992 aa12.78□□□□□ -0.36
UPK1A-201ENST00000222275 POLR3HQ9Y535 204 aaPredicted RBP12.78□□□□□ -0.36
UPK1A-201ENST00000222275 PCDHA9Q9Y5H5 950 aa12.78□□□□□ -0.36
UPK1A-201ENST00000222275 CSAG2Q9Y5P2 127 aa12.78□□□□□ -0.36
UPK1A-201ENST00000222275 PTGDR2Q9Y5Y4 395 aa12.78□□□□□ -0.36
UPK1A-201ENST00000222275 NUP210LQ5VU65 1888 aa12.77□□□□□ -0.37
UPK1A-201ENST00000222275 LOC102723996A0A087X1L8 192 aa12.77□□□□□ -0.37
UPK1A-201ENST00000222275 A0A1W2PQ72 361 aa12.77□□□□□ -0.37
UPK1A-201ENST00000222275 A0A1W2PR48 441 aa12.77□□□□□ -0.37
UPK1A-201ENST00000222275 FAM227AF5H4B4 570 aa12.77□□□□□ -0.37
UPK1A-201ENST00000222275 DYRK3O43781 588 aa12.77□□□□□ -0.37
UPK1A-201ENST00000222275 KLHL41O60662 606 aa12.77□□□□□ -0.37
UPK1A-201ENST00000222275 JRKO75564 520 aa12.77□□□□□ -0.37
UPK1A-201ENST00000222275 CDC123O75794 336 aaPredicted RBP12.77□□□□□ -0.37
UPK1A-201ENST00000222275 GPR75O95800 540 aa12.77□□□□□ -0.37
UPK1A-201ENST00000222275 AIFM1O95831 613 aa12.77□□□□□ -0.37
UPK1A-201ENST00000222275 VIMP08670 466 aaKnown RBP12.77□□□□□ -0.37
UPK1A-201ENST00000222275 PRR35P0CG20 571 aa12.77□□□□□ -0.37
UPK1A-201ENST00000222275 ICAM2P13598 275 aa12.77□□□□□ -0.37
UPK1A-201ENST00000222275 COX7A2P14406 83 aa12.77□□□□□ -0.37
UPK1A-201ENST00000222275 ALOX15P16050 662 aaPredicted RBP12.77□□□□□ -0.37
UPK1A-201ENST00000222275 PIK3R1P27986 724 aa12.77□□□□□ -0.37
UPK1A-201ENST00000222275 SOX8P57073 446 aa12.77□□□□□ -0.37
UPK1A-201ENST00000222275 RAE1P78406 368 aaKnown RBP12.77□□□□□ -0.37
UPK1A-201ENST00000222275 ACTN3Q08043 901 aaPredicted RBP12.77□□□□□ -0.37
UPK1A-201ENST00000222275 CRB2Q5IJ48 1285 aa12.77□□□□□ -0.37
UPK1A-201ENST00000222275 SLC6A19Q695T7 634 aa12.77□□□□□ -0.37
UPK1A-201ENST00000222275 LARP4Q71RC2 724 aaKnown RBP eCLIP12.77□□□□□ -0.37
UPK1A-201ENST00000222275 R3HCC1LQ7Z5L2 792 aaKnown RBP12.77□□□□□ -0.37
UPK1A-201ENST00000222275 NATD1Q8N6N6 113 aa12.77□□□□□ -0.37
UPK1A-201ENST00000222275 OR4K14Q8NGD5 310 aa12.77□□□□□ -0.37
UPK1A-201ENST00000222275 MTERF3Q96E29 417 aa12.77□□□□□ -0.37
UPK1A-201ENST00000222275 MAELQ96JY0 434 aaKnown RBP12.77□□□□□ -0.37
UPK1A-201ENST00000222275 CSF3RQ99062 836 aa12.77□□□□□ -0.37
UPK1A-201ENST00000222275 PRPF18Q99633 342 aaKnown RBP12.77□□□□□ -0.37
UPK1A-201ENST00000222275 EBPLQ9BY08 206 aa12.77□□□□□ -0.37
UPK1A-201ENST00000222275 RBCK1Q9BYM8 510 aa12.77□□□□□ -0.37
UPK1A-201ENST00000222275 MIEF1Q9NQG6 463 aa12.77□□□□□ -0.37
UPK1A-201ENST00000222275 GIMAP4Q9NUV9 329 aa12.77□□□□□ -0.37
UPK1A-201ENST00000222275 GPR83Q9NYM4 423 aa12.77□□□□□ -0.37
UPK1A-201ENST00000222275 FBXL4Q9UKA2 621 aa12.77□□□□□ -0.37
UPK1A-201ENST00000222275 ZNF451Q9Y4E5 1061 aa12.77□□□□□ -0.37
UPK1A-201ENST00000222275 IGKV3D-11A0A0A0MRZ8 115 aa12.76□□□□□ -0.37
UPK1A-201ENST00000222275 TCRBV16S1A1N1A0A5B0 115 aa12.76□□□□□ -0.37
UPK1A-201ENST00000222275 OR2W5A6NFC9 320 aa12.76□□□□□ -0.37
UPK1A-201ENST00000222275 TTLL8A6PVC2 850 aa12.76□□□□□ -0.37
UPK1A-201ENST00000222275 SDHDO14521 159 aa12.76□□□□□ -0.37
UPK1A-201ENST00000222275 POLR3GO15318 223 aaPredicted RBP12.76□□□□□ -0.37
UPK1A-201ENST00000222275 DIAPH2O60879 1101 aa12.76□□□□□ -0.37
UPK1A-201ENST00000222275 JUNP05412 331 aaKnown RBP12.76□□□□□ -0.37
UPK1A-201ENST00000222275 BCKDHAP12694 445 aa12.76□□□□□ -0.37
UPK1A-201ENST00000222275 DDCP20711 480 aa12.76□□□□□ -0.37
UPK1A-201ENST00000222275 C2orf80Q0P641 193 aa12.76□□□□□ -0.37
UPK1A-201ENST00000222275 TERF2Q15554 542 aa12.76□□□□□ -0.37
UPK1A-201ENST00000222275 IL23RQ5VWK5 629 aa12.76□□□□□ -0.37
UPK1A-201ENST00000222275 C18orf63Q68DL7 685 aa12.76□□□□□ -0.37
UPK1A-201ENST00000222275 SLC48A1Q6P1K1 146 aa12.76□□□□□ -0.37
UPK1A-201ENST00000222275 EPGNQ6UW88 154 aa12.76□□□□□ -0.37
UPK1A-201ENST00000222275 NDUFAF7Q7L592 441 aa12.76□□□□□ -0.37
UPK1A-201ENST00000222275 CPEB2Q7Z5Q1 589 aaKnown RBP12.76□□□□□ -0.37
UPK1A-201ENST00000222275 OR11G2Q8NGC1 345 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 82.2 ms