RNA–Protein interactions for RNA: ENST00000220429.12

GABPB1-201, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 1 (best) BASIC

Gene GABPB1, Length 2,726 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-201ENST00000220429 LAMA3Q16787 3333 aa13□□□□□ -0.33
GABPB1-201ENST00000220429 LOC102723532A0A0G2JNH3 316 aa12.99□□□□□ -0.33
GABPB1-201ENST00000220429 ANKRD66B4E2M5 251 aa12.99□□□□□ -0.33
GABPB1-201ENST00000220429 CCNDBP1O95273 360 aa12.99□□□□□ -0.33
GABPB1-201ENST00000220429 TGM4P49221 684 aa12.99□□□□□ -0.33
GABPB1-201ENST00000220429 PFKFB4Q16877 469 aa12.99□□□□□ -0.33
GABPB1-201ENST00000220429 TPGS2Q68CL5 300 aa12.99□□□□□ -0.33
GABPB1-201ENST00000220429 TMEM107Q6UX40 140 aa12.99□□□□□ -0.33
GABPB1-201ENST00000220429 TMEM150AQ86TG1 271 aa12.99□□□□□ -0.33
GABPB1-201ENST00000220429 SLC34A3Q8N130 599 aa12.99□□□□□ -0.33
GABPB1-201ENST00000220429 OR11H7Q8NGC8 314 aa12.99□□□□□ -0.33
GABPB1-201ENST00000220429 KIAA1143Q96AT1 154 aaPredicted RBP12.99□□□□□ -0.33
GABPB1-201ENST00000220429 TRIM43Q96BQ3 446 aaPredicted RBP12.99□□□□□ -0.33
GABPB1-201ENST00000220429 NSUN5Q96P11 429 aaKnown RBP12.99□□□□□ -0.33
GABPB1-201ENST00000220429 COL21A1Q96P44 957 aa12.99□□□□□ -0.33
GABPB1-201ENST00000220429 SLC22A12Q96S37 553 aa12.99□□□□□ -0.33
GABPB1-201ENST00000220429 GORASP2Q9H8Y8 452 aa12.99□□□□□ -0.33
GABPB1-201ENST00000220429 EQTNQ9NQ60 294 aa12.99□□□□□ -0.33
GABPB1-201ENST00000220429 GALPQ9UBC7 116 aa12.99□□□□□ -0.33
GABPB1-201ENST00000220429 EPHA6Q9UF33 1036 aa12.99□□□□□ -0.33
GABPB1-201ENST00000220429 FKBPLQ9UIM3 349 aa12.99□□□□□ -0.33
GABPB1-201ENST00000220429 PTGDR2Q9Y5Y4 395 aa12.99□□□□□ -0.33
GABPB1-201ENST00000220429 PRAMEF33A0A0G2JMD5 474 aa12.99□□□□□ -0.33
GABPB1-201ENST00000220429 IQCMA0A1B0GVH7 501 aa12.99□□□□□ -0.33
GABPB1-201ENST00000220429 AIPO00170 330 aa12.99□□□□□ -0.33
GABPB1-201ENST00000220429 QSOX1O00391 747 aa12.99□□□□□ -0.33
GABPB1-201ENST00000220429 PRAMEF10O60809 474 aa12.99□□□□□ -0.33
GABPB1-201ENST00000220429 NDUFS3O75489 264 aa12.99□□□□□ -0.33
GABPB1-201ENST00000220429 C9P02748 559 aa12.99□□□□□ -0.33
GABPB1-201ENST00000220429 PRF1P14222 555 aa12.99□□□□□ -0.33
GABPB1-201ENST00000220429 LPOP22079 712 aaPredicted RBP12.99□□□□□ -0.33
GABPB1-201ENST00000220429 EPHA2P29317 976 aa12.99□□□□□ -0.33
GABPB1-201ENST00000220429 DAPP51397 102 aa12.99□□□□□ -0.33
GABPB1-201ENST00000220429 PRMT2P55345 433 aa12.99□□□□□ -0.33
GABPB1-201ENST00000220429 TRAM2Q15035 370 aa12.99□□□□□ -0.33
GABPB1-201ENST00000220429 LRRC66Q68CR7 880 aa12.99□□□□□ -0.33
GABPB1-201ENST00000220429 BICRALQ6AI39 1079 aa12.99□□□□□ -0.33
GABPB1-201ENST00000220429 C19orf48Q6RUI8 117 aa12.99□□□□□ -0.33
GABPB1-201ENST00000220429 DET1Q7L5Y6 550 aa12.99□□□□□ -0.33
GABPB1-201ENST00000220429 KANSL1Q7Z3B3 1105 aa12.99□□□□□ -0.33
GABPB1-201ENST00000220429 EFHBQ8N7U6 833 aa12.99□□□□□ -0.33
GABPB1-201ENST00000220429 RAD9AQ99638 391 aa12.99□□□□□ -0.33
GABPB1-201ENST00000220429 GPR21Q99679 349 aa12.99□□□□□ -0.33
GABPB1-201ENST00000220429 ACTR6Q9GZN1 396 aa12.99□□□□□ -0.33
GABPB1-201ENST00000220429 DERL2Q9GZP9 239 aa12.99□□□□□ -0.33
GABPB1-201ENST00000220429 KCNH6Q9H252 994 aa12.99□□□□□ -0.33
GABPB1-201ENST00000220429 MIXL1Q9H2W2 232 aa12.99□□□□□ -0.33
GABPB1-201ENST00000220429 OSGEPL1Q9H4B0 414 aa12.99□□□□□ -0.33
GABPB1-201ENST00000220429 SLC22A11Q9NSA0 550 aa12.99□□□□□ -0.33
GABPB1-201ENST00000220429 IMPAD1Q9NX62 359 aa12.99□□□□□ -0.33
GABPB1-201ENST00000220429 SPHK1Q9NYA1 384 aa12.99□□□□□ -0.33
GABPB1-201ENST00000220429 TAS2R13Q9NYV9 303 aa12.99□□□□□ -0.33
GABPB1-201ENST00000220429 DENND4CQ5VZ89 1909 aa12.98□□□□□ -0.33
GABPB1-201ENST00000220429 GSTA4O15217 222 aa12.98□□□□□ -0.33
GABPB1-201ENST00000220429 KERAO60938 352 aa12.98□□□□□ -0.33
GABPB1-201ENST00000220429 ATG12O94817 140 aa12.98□□□□□ -0.33
GABPB1-201ENST00000220429 CCNB2O95067 398 aa12.98□□□□□ -0.33
GABPB1-201ENST00000220429 HLA-DQB1P01920 261 aa12.98□□□□□ -0.33
GABPB1-201ENST00000220429 LPLP06858 475 aa12.98□□□□□ -0.33
GABPB1-201ENST00000220429 OR56A5P0C7T3 313 aa12.98□□□□□ -0.33
GABPB1-201ENST00000220429 SLC2A2P11168 524 aaPredicted RBP12.98□□□□□ -0.33
GABPB1-201ENST00000220429 HGFP14210 728 aa12.98□□□□□ -0.33
GABPB1-201ENST00000220429 LBPP18428 481 aa12.98□□□□□ -0.33
GABPB1-201ENST00000220429 FOXA1P55317 472 aa12.98□□□□□ -0.33
GABPB1-201ENST00000220429 TWF1Q12792 350 aa12.98□□□□□ -0.33
GABPB1-201ENST00000220429 MADCAM1Q13477 382 aa12.98□□□□□ -0.33
GABPB1-201ENST00000220429 TSTQ16762 297 aaKnown RBP12.98□□□□□ -0.33
GABPB1-201ENST00000220429 PTPRNQ16849 979 aa12.98□□□□□ -0.33
GABPB1-201ENST00000220429 KIAA1614Q5VZ46 1190 aa12.98□□□□□ -0.33
GABPB1-201ENST00000220429 FRMPD2BQ6IN97 320 aa12.98□□□□□ -0.33
GABPB1-201ENST00000220429 SHQ1Q6PI26 577 aaKnown RBP12.98□□□□□ -0.33
GABPB1-201ENST00000220429 NLRC3Q7RTR2 1065 aa12.98□□□□□ -0.33
GABPB1-201ENST00000220429 TMCO2Q7Z6W1 182 aaPredicted RBP12.98□□□□□ -0.33
GABPB1-201ENST00000220429 ATCAYQ86WG3 371 aa12.98□□□□□ -0.33
GABPB1-201ENST00000220429 UCN3Q969E3 161 aa12.98□□□□□ -0.33
GABPB1-201ENST00000220429 CREB3L1Q96BA8 519 aa12.98□□□□□ -0.33
GABPB1-201ENST00000220429 VWCEQ96DN2 955 aa12.98□□□□□ -0.33
GABPB1-201ENST00000220429 LRRC46Q96FV0 321 aa12.98□□□□□ -0.33
GABPB1-201ENST00000220429 BTBD1Q9H0C5 482 aa12.98□□□□□ -0.33
GABPB1-201ENST00000220429 DNTTIP1Q9H147 329 aa12.98□□□□□ -0.33
GABPB1-201ENST00000220429 SLC28A3Q9HAS3 691 aa12.98□□□□□ -0.33
GABPB1-201ENST00000220429 BPIFA1Q9NP55 256 aa12.98□□□□□ -0.33
GABPB1-201ENST00000220429 AMBNQ9NP70 447 aa12.98□□□□□ -0.33
GABPB1-201ENST00000220429 EXOSC4Q9NPD3 245 aaKnown RBP12.98□□□□□ -0.33
GABPB1-201ENST00000220429 KRT84Q9NSB2 600 aa12.98□□□□□ -0.33
GABPB1-201ENST00000220429 DNAJC15Q9Y5T4 150 aa12.98□□□□□ -0.33
GABPB1-201ENST00000220429 LCHNA4D1U4 455 aa12.98□□□□□ -0.33
GABPB1-201ENST00000220429 C2orf74A8MZ97 194 aa12.98□□□□□ -0.33
GABPB1-201ENST00000220429 OR1I1O60431 355 aa12.98□□□□□ -0.33
GABPB1-201ENST00000220429 TBL1XO60907 577 aa12.98□□□□□ -0.33
GABPB1-201ENST00000220429 IL6P05231 212 aa12.98□□□□□ -0.33
GABPB1-201ENST00000220429 STOMP27105 288 aa12.98□□□□□ -0.33
GABPB1-201ENST00000220429 MC4RP32245 332 aa12.98□□□□□ -0.33
GABPB1-201ENST00000220429 FNTBP49356 437 aa12.98□□□□□ -0.33
GABPB1-201ENST00000220429 MTPNP58546 118 aa12.98□□□□□ -0.33
GABPB1-201ENST00000220429 ZXDBP98169 803 aa12.98□□□□□ -0.33
GABPB1-201ENST00000220429 LAPTM4AQ15012 233 aa12.98□□□□□ -0.33
GABPB1-201ENST00000220429 FAM76BQ5HYJ3 339 aa12.98□□□□□ -0.33
GABPB1-201ENST00000220429 TCTE1Q5JU00 501 aa12.98□□□□□ -0.33
GABPB1-201ENST00000220429 NCEH1Q6PIU2 408 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms