RNA–Protein interactions for RNA: ENST00000620996.4

VTA1-205, Transcript of vesicle trafficking 1, humanhuman

TSL 3 BASIC

Gene VTA1, Length 3,272 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1-205ENST00000620996 CDH15P55291 814 aa9.42□□□□□ -0.9
VTA1-205ENST00000620996 PPP1CAP62136 330 aa9.42□□□□□ -0.9
VTA1-205ENST00000620996 VLDLRP98155 873 aa9.42□□□□□ -0.9
VTA1-205ENST00000620996 HHEXQ03014 270 aa9.42□□□□□ -0.9
VTA1-205ENST00000620996 TEAD4Q15561 434 aa9.42□□□□□ -0.9
VTA1-205ENST00000620996 DEFB110Q30KQ9 67 aa9.42□□□□□ -0.9
VTA1-205ENST00000620996 FIGLAQ6QHK4 219 aa9.42□□□□□ -0.9
VTA1-205ENST00000620996 TMEM179BQ7Z7N9 219 aa9.42□□□□□ -0.9
VTA1-205ENST00000620996 PARGQ86W56 976 aa9.42□□□□□ -0.9
VTA1-205ENST00000620996 CARM1Q86X55 608 aa9.42□□□□□ -0.9
VTA1-205ENST00000620996 TMEFF1Q8IYR6 380 aa9.42□□□□□ -0.9
VTA1-205ENST00000620996 ZNF555Q8NEP9 628 aa9.42□□□□□ -0.9
VTA1-205ENST00000620996 OR52J3Q8NH60 311 aa9.42□□□□□ -0.9
VTA1-205ENST00000620996 LMX1AQ8TE12 382 aa9.42□□□□□ -0.9
VTA1-205ENST00000620996 ZDHHC1Q8WTX9 485 aa9.42□□□□□ -0.9
VTA1-205ENST00000620996 RERGQ96A58 199 aaPredicted RBP9.42□□□□□ -0.9
VTA1-205ENST00000620996 TPK1Q9H3S4 243 aa9.42□□□□□ -0.9
VTA1-205ENST00000620996 TOR3AQ9H497 397 aa9.42□□□□□ -0.9
VTA1-205ENST00000620996 RAD21L1Q9H4I0 556 aa9.42□□□□□ -0.9
VTA1-205ENST00000620996 MAGIXQ9H6Y5 334 aa9.42□□□□□ -0.9
VTA1-205ENST00000620996 DDX31Q9H8H2 851 aaKnown RBP9.42□□□□□ -0.9
VTA1-205ENST00000620996 LTB4R2Q9NPC1 389 aa9.42□□□□□ -0.9
VTA1-205ENST00000620996 PNPLA3Q9NST1 481 aa9.42□□□□□ -0.9
VTA1-205ENST00000620996 STARD5Q9NSY2 213 aa9.42□□□□□ -0.9
VTA1-205ENST00000620996 GPATCH2Q9NW75 528 aa9.42□□□□□ -0.9
VTA1-205ENST00000620996 DMTF1Q9Y222 760 aa9.42□□□□□ -0.9
VTA1-205ENST00000620996 ANGPT4Q9Y264 503 aa9.42□□□□□ -0.9
VTA1-205ENST00000620996 TESMINQ9Y4I5 508 aa9.42□□□□□ -0.9
VTA1-205ENST00000620996 A0A0A6YYD5 115 aa9.41□□□□□ -0.9
VTA1-205ENST00000620996 UPK1AO00322 258 aa9.41□□□□□ -0.9
VTA1-205ENST00000620996 PRICKLE3O43900 615 aaPredicted RBP9.41□□□□□ -0.9
VTA1-205ENST00000620996 ENDOUP21128 410 aaKnown RBP9.41□□□□□ -0.9
VTA1-205ENST00000620996 AHRP35869 848 aa9.41□□□□□ -0.9
VTA1-205ENST00000620996 CCT3P49368 545 aaKnown RBP9.41□□□□□ -0.9
VTA1-205ENST00000620996 MAZP56270 477 aaKnown RBP9.41□□□□□ -0.9
VTA1-205ENST00000620996 RPS15AP62244 130 aaKnown RBP9.41□□□□□ -0.9
VTA1-205ENST00000620996 KIR2DS3Q14952 304 aa9.41□□□□□ -0.9
VTA1-205ENST00000620996 OR2T5Q6IEZ7 315 aa9.41□□□□□ -0.9
VTA1-205ENST00000620996 EIF3MQ7L2H7 374 aaKnown RBP9.41□□□□□ -0.9
VTA1-205ENST00000620996 C6orf120Q7Z4R8 191 aa9.41□□□□□ -0.9
VTA1-205ENST00000620996 ZNF438Q7Z4V0 828 aa9.41□□□□□ -0.9
VTA1-205ENST00000620996 PAQR7Q86WK9 346 aa9.41□□□□□ -0.9
VTA1-205ENST00000620996 OOSP2Q86WS3 158 aa9.41□□□□□ -0.9
VTA1-205ENST00000620996 MFSD2AQ8NA29 543 aa9.41□□□□□ -0.9
VTA1-205ENST00000620996 OR2T29Q8NH02 315 aa9.41□□□□□ -0.9
VTA1-205ENST00000620996 DOK4Q8TEW6 326 aa9.41□□□□□ -0.9
VTA1-205ENST00000620996 XAGE5Q8WWM1 108 aa9.41□□□□□ -0.9
VTA1-205ENST00000620996 OR2A14Q96R47 310 aa9.41□□□□□ -0.9
VTA1-205ENST00000620996 PRO3102Q9H379 93 aa9.41□□□□□ -0.9
VTA1-205ENST00000620996 RIBC2Q9H4K1 309 aa9.41□□□□□ -0.9
VTA1-205ENST00000620996 REEP1Q9H902 201 aa9.41□□□□□ -0.9
VTA1-205ENST00000620996 GIMAP4Q9NUV9 329 aa9.41□□□□□ -0.9
VTA1-205ENST00000620996 VNN3Q9NY84 501 aa9.41□□□□□ -0.9
VTA1-205ENST00000620996 CLCA2Q9UQC9 943 aa9.41□□□□□ -0.9
VTA1-205ENST00000620996 TMEM265A0A087WTH1 108 aa9.41□□□□□ -0.9
VTA1-205ENST00000620996 A0A1W2PR48 441 aa9.41□□□□□ -0.9
VTA1-205ENST00000620996 C2orf74A8MZ97 194 aa9.41□□□□□ -0.9
VTA1-205ENST00000620996 GUCY1B2O75343 617 aa9.41□□□□□ -0.9
VTA1-205ENST00000620996 AIFM1O95831 613 aa9.41□□□□□ -0.9
VTA1-205ENST00000620996 EEF1B2P24534 225 aaKnown RBP9.41□□□□□ -0.9
VTA1-205ENST00000620996 DCTP40126 519 aa9.41□□□□□ -0.9
VTA1-205ENST00000620996 CBLL1Q75N03 491 aa9.41□□□□□ -0.9
VTA1-205ENST00000620996 PATL1Q86TB9 770 aaKnown RBP9.41□□□□□ -0.9
VTA1-205ENST00000620996 HORMAD2Q8N7B1 307 aa9.41□□□□□ -0.9
VTA1-205ENST00000620996 ATG16L2Q8NAA4 619 aa9.41□□□□□ -0.9
VTA1-205ENST00000620996 SRFBP1Q8NEF9 429 aaKnown RBP9.41□□□□□ -0.9
VTA1-205ENST00000620996 TSPAN14Q8NG11 270 aa9.41□□□□□ -0.9
VTA1-205ENST00000620996 OR5D16Q8NGK9 328 aa9.41□□□□□ -0.9
VTA1-205ENST00000620996 OR5K1Q8NHB7 308 aa9.41□□□□□ -0.9
VTA1-205ENST00000620996 HSPA12BQ96MM6 686 aa9.41□□□□□ -0.9
VTA1-205ENST00000620996 MAPKAP1Q9BPZ7 522 aa9.41□□□□□ -0.9
VTA1-205ENST00000620996 ANKRD60Q9BZ19 345 aa9.41□□□□□ -0.9
VTA1-205ENST00000620996 ADNPQ9H2P0 1102 aa9.41□□□□□ -0.9
VTA1-205ENST00000620996 SLC35C2Q9NQQ7 365 aa9.41□□□□□ -0.9
VTA1-205ENST00000620996 PDP1Q9P0J1 537 aaPredicted RBP9.41□□□□□ -0.9
VTA1-205ENST00000620996 NOX1Q9Y5S8 564 aa9.41□□□□□ -0.9
VTA1-205ENST00000620996 PLXND1Q9Y4D7 1925 aa9.41□□□□□ -0.9
VTA1-205ENST00000620996 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa9.41□□□□□ -0.9
VTA1-205ENST00000620996 A0A1W2PS29 197 aa9.41□□□□□ -0.9
VTA1-205ENST00000620996 DLGAP1O14490 977 aa9.41□□□□□ -0.9
VTA1-205ENST00000620996 SLC28A2O43868 658 aa9.41□□□□□ -0.9
VTA1-205ENST00000620996 CTSVO60911 334 aa9.41□□□□□ -0.9
VTA1-205ENST00000620996 NME6O75414 186 aaPredicted RBP9.41□□□□□ -0.9
VTA1-205ENST00000620996 GSSP48637 474 aa9.41□□□□□ -0.9
VTA1-205ENST00000620996 BLKP51451 505 aa9.41□□□□□ -0.9
VTA1-205ENST00000620996 TXNL4AP83876 142 aaKnown RBP9.41□□□□□ -0.9
VTA1-205ENST00000620996 ID2Q02363 134 aa9.41□□□□□ -0.9
VTA1-205ENST00000620996 HYAL2Q12891 473 aa9.41□□□□□ -0.9
VTA1-205ENST00000620996 VEZF1Q14119 521 aa9.41□□□□□ -0.9
VTA1-205ENST00000620996 ZNF425Q6IV72 752 aa9.41□□□□□ -0.9
VTA1-205ENST00000620996 TMEM107Q6UX40 140 aa9.41□□□□□ -0.9
VTA1-205ENST00000620996 OLIG3Q7RTU3 272 aa9.41□□□□□ -0.9
VTA1-205ENST00000620996 OR4N5Q8IXE1 308 aa9.41□□□□□ -0.9
VTA1-205ENST00000620996 SLC35G5Q96KT7 338 aa9.41□□□□□ -0.9
VTA1-205ENST00000620996 BARD1Q99728 777 aaKnown RBP9.41□□□□□ -0.9
VTA1-205ENST00000620996 RBM4BQ9BQ04 359 aaKnown RBP9.41□□□□□ -0.9
VTA1-205ENST00000620996 RBM4Q9BWF3 364 aaKnown RBP9.41□□□□□ -0.9
VTA1-205ENST00000620996 GLIPR2Q9H4G4 154 aa9.41□□□□□ -0.9
VTA1-205ENST00000620996 ANKRA2Q9H9E1 313 aa9.41□□□□□ -0.9
VTA1-205ENST00000620996 IL21RQ9HBE5 538 aa9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms