RNA–Protein interactions for RNA: ENST00000616395.4

TRAPPC3-209, Transcript of trafficking protein particle complex 3, humanhuman

TSL 3 BASIC

Gene TRAPPC3, Length 1,336 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-209ENST00000616395 ARF3P61204 181 aaPredicted RBP16.46■□□□□ 0.23
TRAPPC3-209ENST00000616395 TGFBIQ15582 683 aa16.46■□□□□ 0.23
TRAPPC3-209ENST00000616395 MAPKAPK3Q16644 382 aa16.46■□□□□ 0.23
TRAPPC3-209ENST00000616395 EEF1AKMT2Q5JPI9 291 aaKnown RBP16.46■□□□□ 0.23
TRAPPC3-209ENST00000616395 METTL21CQ5VZV1 264 aa16.46■□□□□ 0.23
TRAPPC3-209ENST00000616395 CPEB2Q7Z5Q1 589 aaKnown RBP16.46■□□□□ 0.23
TRAPPC3-209ENST00000616395 CLYBLQ8N0X4 340 aa16.46■□□□□ 0.23
TRAPPC3-209ENST00000616395 CPSF7Q8N684 471 aaKnown RBP16.46■□□□□ 0.23
TRAPPC3-209ENST00000616395 WFDC11Q8NEX6 87 aa16.46■□□□□ 0.23
TRAPPC3-209ENST00000616395 OR2L3Q8NG85 312 aa16.46■□□□□ 0.23
TRAPPC3-209ENST00000616395 METTL21AQ8WXB1 218 aa16.46■□□□□ 0.23
TRAPPC3-209ENST00000616395 ATL1Q8WXF7 558 aa16.46■□□□□ 0.23
TRAPPC3-209ENST00000616395 ARSGQ96EG1 525 aa16.46■□□□□ 0.23
TRAPPC3-209ENST00000616395 RMND5BQ96G75 393 aaPredicted RBP16.46■□□□□ 0.23
TRAPPC3-209ENST00000616395 TMEM237Q96Q45 408 aa16.46■□□□□ 0.23
TRAPPC3-209ENST00000616395 LRFN1Q9P244 771 aa16.46■□□□□ 0.23
TRAPPC3-209ENST00000616395 HEY2Q9UBP5 337 aa16.46■□□□□ 0.23
TRAPPC3-209ENST00000616395 RUVBL1Q9Y265 456 aaKnown RBP16.46■□□□□ 0.23
TRAPPC3-209ENST00000616395 GABRR3A8MPY1 467 aa16.45■□□□□ 0.22
TRAPPC3-209ENST00000616395 CATP04040 527 aaKnown RBP16.45■□□□□ 0.22
TRAPPC3-209ENST00000616395 RPN2P04844 631 aa16.45■□□□□ 0.22
TRAPPC3-209ENST00000616395 ALOX15P16050 662 aaPredicted RBP16.45■□□□□ 0.22
TRAPPC3-209ENST00000616395 ADSLP30566 484 aaPredicted RBP16.45■□□□□ 0.22
TRAPPC3-209ENST00000616395 HNMTP50135 292 aa16.45■□□□□ 0.22
TRAPPC3-209ENST00000616395 AP1S2P56377 157 aa16.45■□□□□ 0.22
TRAPPC3-209ENST00000616395 YBX1P67809 324 aaKnown RBP16.45■□□□□ 0.22
TRAPPC3-209ENST00000616395 MAT1AQ00266 395 aaKnown RBP16.45■□□□□ 0.22
TRAPPC3-209ENST00000616395 CDKL1Q00532 357 aa16.45■□□□□ 0.22
TRAPPC3-209ENST00000616395 LCP2Q13094 533 aa16.45■□□□□ 0.22
TRAPPC3-209ENST00000616395 SH2D4BQ5SQS7 431 aa16.45■□□□□ 0.22
TRAPPC3-209ENST00000616395 FBXO42Q6P3S6 717 aa16.45■□□□□ 0.22
TRAPPC3-209ENST00000616395 CLEC9AQ6UXN8 241 aa16.45■□□□□ 0.22
TRAPPC3-209ENST00000616395 HORMAD2Q8N7B1 307 aa16.45■□□□□ 0.22
TRAPPC3-209ENST00000616395 ZNF781Q8N8C0 355 aa16.45■□□□□ 0.22
TRAPPC3-209ENST00000616395 SPATA3Q8NHX4 192 aa16.45■□□□□ 0.22
TRAPPC3-209ENST00000616395 MAGEC3Q8TD91 643 aa16.45■□□□□ 0.22
TRAPPC3-209ENST00000616395 CCT6BQ92526 530 aa16.45■□□□□ 0.22
TRAPPC3-209ENST00000616395 C18orf12Q96KH6 178 aa16.45■□□□□ 0.22
TRAPPC3-209ENST00000616395 SORT1Q99523 831 aa16.45■□□□□ 0.22
TRAPPC3-209ENST00000616395 ZFYVE21Q9BQ24 234 aa16.45■□□□□ 0.22
TRAPPC3-209ENST00000616395 GPATCH1Q9BRR8 931 aaKnown RBP16.45■□□□□ 0.22
TRAPPC3-209ENST00000616395 C1QTNF3Q9BXJ4 246 aa16.45■□□□□ 0.22
TRAPPC3-209ENST00000616395 VN1R1Q9GZP7 353 aa16.45■□□□□ 0.22
TRAPPC3-209ENST00000616395 CLEC4MQ9H2X3 399 aaPredicted RBP16.45■□□□□ 0.22
TRAPPC3-209ENST00000616395 SYNPO2LQ9H987 977 aa16.45■□□□□ 0.22
TRAPPC3-209ENST00000616395 SAR1AQ9NR31 198 aa16.45■□□□□ 0.22
TRAPPC3-209ENST00000616395 WWOXQ9NZC7 414 aa16.45■□□□□ 0.22
TRAPPC3-209ENST00000616395 L3MBTL1Q9Y468 752 aa16.45■□□□□ 0.22
TRAPPC3-209ENST00000616395 A0A0A6YYC8 382 aaPredicted RBP16.45■□□□□ 0.22
TRAPPC3-209ENST00000616395 I3L1I5 382 aaPredicted RBP16.45■□□□□ 0.22
TRAPPC3-209ENST00000616395 FOXS1O43638 330 aa16.45■□□□□ 0.22
TRAPPC3-209ENST00000616395 MATN4O95460 622 aa16.45■□□□□ 0.22
TRAPPC3-209ENST00000616395 PKNOX1P55347 436 aa16.45■□□□□ 0.22
TRAPPC3-209ENST00000616395 HKDC1Q2TB90 917 aa16.45■□□□□ 0.22
TRAPPC3-209ENST00000616395 UBE2R2Q712K3 238 aaPredicted RBP16.45■□□□□ 0.22
TRAPPC3-209ENST00000616395 ZZZ3Q8IYH5 903 aa16.45■□□□□ 0.22
TRAPPC3-209ENST00000616395 CSNK1A1LQ8N752 337 aa16.45■□□□□ 0.22
TRAPPC3-209ENST00000616395 PDPRQ8NCN5 879 aa16.45■□□□□ 0.22
TRAPPC3-209ENST00000616395 ATP6V1E2Q96A05 226 aa16.45■□□□□ 0.22
TRAPPC3-209ENST00000616395 CCT7Q99832 543 aa16.45■□□□□ 0.22
TRAPPC3-209ENST00000616395 CCDC28BQ9BUN5 200 aa16.45■□□□□ 0.22
TRAPPC3-209ENST00000616395 PARVBQ9HBI1 364 aa16.45■□□□□ 0.22
TRAPPC3-209ENST00000616395 PNPOQ9NVS9 261 aa16.45■□□□□ 0.22
TRAPPC3-209ENST00000616395 OR2A25A4D2G3 310 aa16.44■□□□□ 0.22
TRAPPC3-209ENST00000616395 NCF1BA6NI72 391 aaPredicted RBP16.44■□□□□ 0.22
TRAPPC3-209ENST00000616395 NCF1CA8MVU1 366 aaPredicted RBP16.44■□□□□ 0.22
TRAPPC3-209ENST00000616395 NME2P1O60361 137 aa16.44■□□□□ 0.22
TRAPPC3-209ENST00000616395 INHBBP09529 407 aa16.44■□□□□ 0.22
TRAPPC3-209ENST00000616395 NCF1P14598 390 aaPredicted RBP16.44■□□□□ 0.22
TRAPPC3-209ENST00000616395 NME2P22392 152 aa16.44■□□□□ 0.22
TRAPPC3-209ENST00000616395 ARL1P40616 181 aaPredicted RBP16.44■□□□□ 0.22
TRAPPC3-209ENST00000616395 DLX5P56178 289 aa16.44■□□□□ 0.22
TRAPPC3-209ENST00000616395 IRX1P78414 480 aaPredicted RBP16.44■□□□□ 0.22
TRAPPC3-209ENST00000616395 CLCQ05315 142 aa16.44■□□□□ 0.22
TRAPPC3-209ENST00000616395 PMPCAQ10713 525 aa16.44■□□□□ 0.22
TRAPPC3-209ENST00000616395 PCBP2Q15366 365 aaKnown RBP eCLIP16.44■□□□□ 0.22
TRAPPC3-209ENST00000616395 ZNF468Q5VIY5 522 aaPredicted RBP16.44■□□□□ 0.22
TRAPPC3-209ENST00000616395 CXXC5Q7LFL8 322 aaKnown RBP16.44■□□□□ 0.22
TRAPPC3-209ENST00000616395 MTDHQ86UE4 582 aaKnown RBP16.44■□□□□ 0.22
TRAPPC3-209ENST00000616395 OR2A1Q8NGT9 310 aa16.44■□□□□ 0.22
TRAPPC3-209ENST00000616395 NUDT8Q8WV74 236 aa16.44■□□□□ 0.22
TRAPPC3-209ENST00000616395 RAD51AP1Q96B01 352 aa16.44■□□□□ 0.22
TRAPPC3-209ENST00000616395 ERP27Q96DN0 273 aa16.44■□□□□ 0.22
TRAPPC3-209ENST00000616395 MBD6Q96DN6 1003 aa16.44■□□□□ 0.22
TRAPPC3-209ENST00000616395 RAB11FIP5Q9BXF6 653 aa16.44■□□□□ 0.22
TRAPPC3-209ENST00000616395 C20orf27Q9GZN8 174 aa16.44■□□□□ 0.22
TRAPPC3-209ENST00000616395 TP63Q9H3D4 680 aaPredicted RBP16.44■□□□□ 0.22
TRAPPC3-209ENST00000616395 ARL15Q9NXU5 204 aa16.44■□□□□ 0.22
TRAPPC3-209ENST00000616395 OPTCQ9UBM4 332 aa16.44■□□□□ 0.22
TRAPPC3-209ENST00000616395 EDARQ9UNE0 448 aa16.44■□□□□ 0.22
TRAPPC3-209ENST00000616395 AKAP6Q13023 2319 aa16.43■□□□□ 0.22
TRAPPC3-209ENST00000616395 CDC40O60508 579 aaKnown RBP eCLIP16.43■□□□□ 0.22
TRAPPC3-209ENST00000616395 PSIP1O75475 530 aaKnown RBP16.43■□□□□ 0.22
TRAPPC3-209ENST00000616395 SLC25A12O75746 678 aa16.43■□□□□ 0.22
TRAPPC3-209ENST00000616395 OTCP00480 354 aa16.43■□□□□ 0.22
TRAPPC3-209ENST00000616395 SERPINA6P08185 405 aa16.43■□□□□ 0.22
TRAPPC3-209ENST00000616395 MTHFD2P13995 350 aa16.43■□□□□ 0.22
TRAPPC3-209ENST00000616395 MNAT1P51948 309 aa16.43■□□□□ 0.22
TRAPPC3-209ENST00000616395 NUP107P57740 925 aa16.43■□□□□ 0.22
TRAPPC3-209ENST00000616395 UNC50Q53HI1 259 aa16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms