RNA–Protein interactions for RNA: ENST00000616074.4

TRAPPC3-208, Transcript of trafficking protein particle complex 3, humanhuman

TSL 5 BASIC

Gene TRAPPC3, Length 1,114 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-208ENST00000616074 SLC35E2BP0CK96 405 aa19.2■□□□□ 0.66
TRAPPC3-208ENST00000616074 ACVR2AP27037 513 aa19.2■□□□□ 0.66
TRAPPC3-208ENST00000616074 SPRP35270 261 aaPredicted RBP19.2■□□□□ 0.66
TRAPPC3-208ENST00000616074 STT3AP46977 705 aa19.2■□□□□ 0.66
TRAPPC3-208ENST00000616074 ASPHQ12797 758 aa19.2■□□□□ 0.66
TRAPPC3-208ENST00000616074 KHDRBS2Q5VWX1 349 aaKnown RBP19.2■□□□□ 0.66
TRAPPC3-208ENST00000616074 ZNF585AQ6P3V2 769 aa19.2■□□□□ 0.66
TRAPPC3-208ENST00000616074 CHSY3Q70JA7 882 aa19.2■□□□□ 0.66
TRAPPC3-208ENST00000616074 ISCA2Q86U28 154 aa19.2■□□□□ 0.66
TRAPPC3-208ENST00000616074 CTAGE3PQ8IX95 158 aa19.2■□□□□ 0.66
TRAPPC3-208ENST00000616074 C9orf40Q8IXQ3 194 aa19.2■□□□□ 0.66
TRAPPC3-208ENST00000616074 DMRTC2Q8IXT2 367 aaPredicted RBP19.2■□□□□ 0.66
TRAPPC3-208ENST00000616074 OR7G3Q8NG95 312 aa19.2■□□□□ 0.66
TRAPPC3-208ENST00000616074 STAG3L4Q8TBR4 150 aa19.2■□□□□ 0.66
TRAPPC3-208ENST00000616074 UBTD2Q8WUN7 234 aa19.2■□□□□ 0.66
TRAPPC3-208ENST00000616074 ATOH8Q96SQ7 321 aa19.2■□□□□ 0.66
TRAPPC3-208ENST00000616074 OR51B5Q9H339 312 aa19.2■□□□□ 0.66
TRAPPC3-208ENST00000616074 SEMA4BQ9NPR2 832 aaPredicted RBP19.2■□□□□ 0.66
TRAPPC3-208ENST00000616074 GRHL1Q9NZI5 618 aa19.2■□□□□ 0.66
TRAPPC3-208ENST00000616074 ATG4BQ9Y4P1 393 aa19.2■□□□□ 0.66
TRAPPC3-208ENST00000616074 FAM215AQ9Y5M1 114 aa19.2■□□□□ 0.66
TRAPPC3-208ENST00000616074 A0A1B0GVC2 190 aa19.19■□□□□ 0.66
TRAPPC3-208ENST00000616074 ATP6AP2A0A1C7CYW4 349 aa19.19■□□□□ 0.66
TRAPPC3-208ENST00000616074 FAM187AA6NFU0 413 aa19.19■□□□□ 0.66
TRAPPC3-208ENST00000616074 FOXO6A8MYZ6 492 aa19.19■□□□□ 0.66
TRAPPC3-208ENST00000616074 BCKDKO14874 412 aa19.19■□□□□ 0.66
TRAPPC3-208ENST00000616074 RAD51CO43502 376 aa19.19■□□□□ 0.66
TRAPPC3-208ENST00000616074 ATP6AP2O75787 350 aa19.19■□□□□ 0.66
TRAPPC3-208ENST00000616074 COX7A2P14406 83 aa19.19■□□□□ 0.66
TRAPPC3-208ENST00000616074 SLAMF1Q13291 335 aa19.19■□□□□ 0.66
TRAPPC3-208ENST00000616074 SLMAPQ14BN4 828 aa19.19■□□□□ 0.66
TRAPPC3-208ENST00000616074 MPEG1Q2M385 716 aa19.19■□□□□ 0.66
TRAPPC3-208ENST00000616074 HYAL4Q2M3T9 481 aa19.19■□□□□ 0.66
TRAPPC3-208ENST00000616074 PIGGQ5H8A4 983 aa19.19■□□□□ 0.66
TRAPPC3-208ENST00000616074 GRTP1Q5TC63 336 aa19.19■□□□□ 0.66
TRAPPC3-208ENST00000616074 DGAT2L6Q6ZPD8 337 aa19.19■□□□□ 0.66
TRAPPC3-208ENST00000616074 RAPH1Q70E73 1250 aa19.19■□□□□ 0.66
TRAPPC3-208ENST00000616074 NUBPLQ8TB37 319 aa19.19■□□□□ 0.66
TRAPPC3-208ENST00000616074 PPWD1Q96BP3 646 aaKnown RBP19.19■□□□□ 0.66
TRAPPC3-208ENST00000616074 CMTM7Q96FZ5 175 aa19.19■□□□□ 0.66
TRAPPC3-208ENST00000616074 SENP5Q96HI0 755 aaPredicted RBP19.19■□□□□ 0.66
TRAPPC3-208ENST00000616074 DGAT2Q96PD7 388 aa19.19■□□□□ 0.66
TRAPPC3-208ENST00000616074 TTYH2Q9BSA4 534 aa19.19■□□□□ 0.66
TRAPPC3-208ENST00000616074 OPTCQ9UBM4 332 aa19.19■□□□□ 0.66
TRAPPC3-208ENST00000616074 ZFHX3Q15911 3703 aa19.19■□□□□ 0.66
TRAPPC3-208ENST00000616074 FIGNL2A6NMB9 653 aa19.18■□□□□ 0.66
TRAPPC3-208ENST00000616074 K7EPI3 171 aa19.18■□□□□ 0.66
TRAPPC3-208ENST00000616074 HRKO00198 91 aa19.18■□□□□ 0.66
TRAPPC3-208ENST00000616074 AQP7O14520 342 aa19.18■□□□□ 0.66
TRAPPC3-208ENST00000616074 KERAO60938 352 aa19.18■□□□□ 0.66
TRAPPC3-208ENST00000616074 IGKV3-11P04433 115 aa19.18■□□□□ 0.66
TRAPPC3-208ENST00000616074 GSTA2P09210 222 aa19.18■□□□□ 0.66
TRAPPC3-208ENST00000616074 SERPINB1P30740 379 aa19.18■□□□□ 0.66
TRAPPC3-208ENST00000616074 PIGAP37287 484 aa19.18■□□□□ 0.66
TRAPPC3-208ENST00000616074 PCDH1Q08174 1060 aa19.18■□□□□ 0.66
TRAPPC3-208ENST00000616074 DDX39BQ13838 428 aaKnown RBP19.18■□□□□ 0.66
TRAPPC3-208ENST00000616074 KBTBD12Q3ZCT8 623 aa19.18■□□□□ 0.66
TRAPPC3-208ENST00000616074 DEPDC1Q5TB30 811 aa19.18■□□□□ 0.66
TRAPPC3-208ENST00000616074 RTL6Q6ICC9 239 aa19.18■□□□□ 0.66
TRAPPC3-208ENST00000616074 OR4C11Q6IEV9 310 aa19.18■□□□□ 0.66
TRAPPC3-208ENST00000616074 GRHL2Q6ISB3 625 aa19.18■□□□□ 0.66
TRAPPC3-208ENST00000616074 ADGRD1Q6QNK2 874 aa19.18■□□□□ 0.66
TRAPPC3-208ENST00000616074 B3GNT6Q6ZMB0 384 aa19.18■□□□□ 0.66
TRAPPC3-208ENST00000616074 SPNS3Q6ZMD2 512 aa19.18■□□□□ 0.66
TRAPPC3-208ENST00000616074 PPM1NQ8N819 430 aa19.18■□□□□ 0.66
TRAPPC3-208ENST00000616074 OR10Q1Q8NGQ4 319 aa19.18■□□□□ 0.66
TRAPPC3-208ENST00000616074 RPF2Q9H7B2 306 aaKnown RBP19.18■□□□□ 0.66
TRAPPC3-208ENST00000616074 NMRAL1Q9HBL8 299 aa19.18■□□□□ 0.66
TRAPPC3-208ENST00000616074 SH2D2AQ9NP31 389 aa19.18■□□□□ 0.66
TRAPPC3-208ENST00000616074 IGSF5Q9NSI5 407 aa19.18■□□□□ 0.66
TRAPPC3-208ENST00000616074 PRKRAO75569 313 aaKnown RBP19.17■□□□□ 0.66
TRAPPC3-208ENST00000616074 NADKO95544 446 aaPredicted RBP19.17■□□□□ 0.66
TRAPPC3-208ENST00000616074 HOXD4P09016 255 aaPredicted RBP19.17■□□□□ 0.66
TRAPPC3-208ENST00000616074 GLI4P10075 376 aa19.17■□□□□ 0.66
TRAPPC3-208ENST00000616074 MAN2A2P49641 1150 aa19.17■□□□□ 0.66
TRAPPC3-208ENST00000616074 TNFRSF17Q02223 184 aa19.17■□□□□ 0.66
TRAPPC3-208ENST00000616074 FOLH1Q04609 750 aa19.17■□□□□ 0.66
TRAPPC3-208ENST00000616074 ZNF791Q3KP31 576 aaPredicted RBP19.17■□□□□ 0.66
TRAPPC3-208ENST00000616074 C18orf63Q68DL7 685 aa19.17■□□□□ 0.66
TRAPPC3-208ENST00000616074 LYPD8Q6UX82 237 aa19.17■□□□□ 0.66
TRAPPC3-208ENST00000616074 TBC1D1Q86TI0 1168 aaPredicted RBP19.17■□□□□ 0.66
TRAPPC3-208ENST00000616074 C7orf57Q8NEG2 295 aa19.17■□□□□ 0.66
TRAPPC3-208ENST00000616074 HUS1BQ8NHY5 278 aa19.17■□□□□ 0.66
TRAPPC3-208ENST00000616074 DOK4Q8TEW6 326 aa19.17■□□□□ 0.66
TRAPPC3-208ENST00000616074 LDAHQ9H6V9 325 aa19.17■□□□□ 0.66
TRAPPC3-208ENST00000616074 ARHGAP21Q5T5U3 1957 aa19.17■□□□□ 0.66
TRAPPC3-208ENST00000616074 SPG11Q96JI7 2443 aa19.16■□□□□ 0.66
TRAPPC3-208ENST00000616074 PLPP1O14494 284 aa19.16■□□□□ 0.66
TRAPPC3-208ENST00000616074 KLK8O60259 260 aa19.16■□□□□ 0.66
TRAPPC3-208ENST00000616074 SUSD5O60279 629 aa19.16■□□□□ 0.66
TRAPPC3-208ENST00000616074 LTA4HP09960 611 aaKnown RBP19.16■□□□□ 0.66
TRAPPC3-208ENST00000616074 MTHFD2P13995 350 aa19.16■□□□□ 0.66
TRAPPC3-208ENST00000616074 EPB42P16452 691 aa19.16■□□□□ 0.66
TRAPPC3-208ENST00000616074 ENDOUP21128 410 aaKnown RBP19.16■□□□□ 0.66
TRAPPC3-208ENST00000616074 RAP1GDS1P52306 607 aa19.16■□□□□ 0.66
TRAPPC3-208ENST00000616074 HNRNPH2P55795 449 aaKnown RBP19.16■□□□□ 0.66
TRAPPC3-208ENST00000616074 PLIN5Q00G26 463 aa19.16■□□□□ 0.66
TRAPPC3-208ENST00000616074 C2orf54Q08AI8 447 aa19.16■□□□□ 0.66
TRAPPC3-208ENST00000616074 SLC10A1Q14973 349 aa19.16■□□□□ 0.66
TRAPPC3-208ENST00000616074 MAATS1Q7Z4T9 603 aa19.16■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms