RNA–Protein interactions for RNA: ENST00000611614.4

COPS7B-223, Transcript of COP9 signalosome subunit 7B, human

TSL 3 BASIC

Gene COPS7B, Length 2,468 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
COPS7B-223	ENST00000611614	NXPE4	Q6UWF7	544 aa		13.22	□□□□□ -0.29
COPS7B-223	ENST00000611614	COMMD6	Q7Z4G1	85 aa		13.22	□□□□□ -0.29
COPS7B-223	ENST00000611614	NAGS	Q8N159	534 aa		13.22	□□□□□ -0.29
COPS7B-223	ENST00000611614	SPEM1	Q8N4L4	309 aa		13.22	□□□□□ -0.29
COPS7B-223	ENST00000611614	RAB42	Q8N4Z0	105 aa		13.22	□□□□□ -0.29
COPS7B-223	ENST00000611614	C11orf65	Q8NCR3	313 aa		13.22	□□□□□ -0.29
COPS7B-223	ENST00000611614	SLC5A11	Q8WWX8	675 aa		13.22	□□□□□ -0.29
COPS7B-223	ENST00000611614	DACH2	Q96NX9	599 aa		13.22	□□□□□ -0.29
COPS7B-223	ENST00000611614	OR2M4	Q96R27	311 aa		13.22	□□□□□ -0.29
COPS7B-223	ENST00000611614	OSGIN1	Q9UJX0	560 aa		13.22	□□□□□ -0.29
COPS7B-223	ENST00000611614	ZNF232	Q9UNY5	417 aa		13.22	□□□□□ -0.29
COPS7B-223	ENST00000611614	CA5B	Q9Y2D0	317 aa		13.22	□□□□□ -0.29
COPS7B-223	ENST00000611614	UGT2A1	Q9Y4X1	527 aa		13.22	□□□□□ -0.29
COPS7B-223	ENST00000611614	A3GALT2	U3KPV4	340 aa		13.22	□□□□□ -0.29
COPS7B-223	ENST00000611614	PMF1-BGLAP	U3KQ54	211 aa		13.22	□□□□□ -0.29
COPS7B-223	ENST00000611614	DOCK9	Q9BZ29	2069 aa		13.22	□□□□□ -0.29
COPS7B-223	ENST00000611614	CYP4B1	P13584	511 aa		13.21	□□□□□ -0.29
COPS7B-223	ENST00000611614	PSMB9	P28065	219 aa		13.21	□□□□□ -0.29
COPS7B-223	ENST00000611614	RPL3	P39023	403 aa	Known RBP	13.21	□□□□□ -0.29
COPS7B-223	ENST00000611614	CRYBA2	P53672	197 aa		13.21	□□□□□ -0.29
COPS7B-223	ENST00000611614	KCNJ10	P78508	379 aa		13.21	□□□□□ -0.29
COPS7B-223	ENST00000611614	ZNF181	Q2M3W8	571 aa		13.21	□□□□□ -0.29
COPS7B-223	ENST00000611614	INAVA	Q3KP66	663 aa		13.21	□□□□□ -0.29
COPS7B-223	ENST00000611614	PLD3	Q8IV08	490 aa		13.21	□□□□□ -0.29
COPS7B-223	ENST00000611614	LMNTD1	Q8N9Z9	388 aa		13.21	□□□□□ -0.29
COPS7B-223	ENST00000611614	TTC29	Q8NA56	475 aa	Predicted RBP	13.21	□□□□□ -0.29
COPS7B-223	ENST00000611614	BMF	Q96LC9	184 aa		13.21	□□□□□ -0.29
COPS7B-223	ENST00000611614	BTBD2	Q9BX70	525 aa		13.21	□□□□□ -0.29
COPS7B-223	ENST00000611614	FGF22	Q9HCT0	170 aa		13.21	□□□□□ -0.29
COPS7B-223	ENST00000611614	CCDC177	Q9NQR7	707 aa	Predicted RBP	13.21	□□□□□ -0.29
COPS7B-223	ENST00000611614	C2orf42	Q9NWW7	574 aa		13.21	□□□□□ -0.29
COPS7B-223	ENST00000611614	THUMPD1	Q9NXG2	353 aa	Known RBP	13.21	□□□□□ -0.29
COPS7B-223	ENST00000611614	KIF17	Q9P2E2	1029 aa		13.21	□□□□□ -0.29
COPS7B-223	ENST00000611614	GMPPB	Q9Y5P6	360 aa		13.21	□□□□□ -0.29
COPS7B-223	ENST00000611614	C19orf67	A6NJJ6	358 aa		13.21	□□□□□ -0.29
COPS7B-223	ENST00000611614	TNFRSF10C	O14798	259 aa		13.21	□□□□□ -0.29
COPS7B-223	ENST00000611614	TGFB1	P01137	390 aa		13.21	□□□□□ -0.29
COPS7B-223	ENST00000611614	C9	P02748	559 aa		13.21	□□□□□ -0.29
COPS7B-223	ENST00000611614	MT-ND2	P03891	347 aa		13.21	□□□□□ -0.29
COPS7B-223	ENST00000611614	HSD17B2	P37059	387 aa		13.21	□□□□□ -0.29
COPS7B-223	ENST00000611614	VBP1	P61758	197 aa		13.21	□□□□□ -0.29
COPS7B-223	ENST00000611614	PDE7A	Q13946	482 aa		13.21	□□□□□ -0.29
COPS7B-223	ENST00000611614	FAHD1	Q6P587	224 aa		13.21	□□□□□ -0.29
COPS7B-223	ENST00000611614	TSPYL5	Q86VY4	417 aa	Predicted RBP	13.21	□□□□□ -0.29
COPS7B-223	ENST00000611614	GJD3	Q8N144	294 aa		13.21	□□□□□ -0.29
COPS7B-223	ENST00000611614	OR5AR1	Q8NGP9	310 aa		13.21	□□□□□ -0.29
COPS7B-223	ENST00000611614	OR5K2	Q8NHB8	316 aa		13.21	□□□□□ -0.29
COPS7B-223	ENST00000611614	WDR48	Q8TAF3	677 aa		13.21	□□□□□ -0.29
COPS7B-223	ENST00000611614	C16orf78	Q8WTQ4	265 aa		13.21	□□□□□ -0.29
COPS7B-223	ENST00000611614	SETD7	Q8WTS6	366 aa	Known RBP	13.21	□□□□□ -0.29
COPS7B-223	ENST00000611614	RLN3	Q8WXF3	142 aa		13.21	□□□□□ -0.29
COPS7B-223	ENST00000611614	MAL2	Q969L2	176 aa		13.21	□□□□□ -0.29
COPS7B-223	ENST00000611614	SCARF2	Q96GP6	870 aa	Predicted RBP	13.21	□□□□□ -0.29
COPS7B-223	ENST00000611614	C12orf66	Q96MD2	445 aa		13.21	□□□□□ -0.29
COPS7B-223	ENST00000611614	EPYC	Q99645	322 aa		13.21	□□□□□ -0.29
COPS7B-223	ENST00000611614	DOHH	Q9BU89	302 aa		13.21	□□□□□ -0.29
COPS7B-223	ENST00000611614	SLIRP	Q9GZT3	109 aa	Known RBP	13.21	□□□□□ -0.29
COPS7B-223	ENST00000611614	MMP27	Q9H306	513 aa		13.21	□□□□□ -0.29
COPS7B-223	ENST00000611614	OR51B5	Q9H339	312 aa		13.21	□□□□□ -0.29
COPS7B-223	ENST00000611614	DSN1	Q9H410	356 aa		13.21	□□□□□ -0.29
COPS7B-223	ENST00000611614	ACOT13	Q9NPJ3	140 aa		13.21	□□□□□ -0.29
COPS7B-223	ENST00000611614	KRT84	Q9NSB2	600 aa		13.21	□□□□□ -0.29
COPS7B-223	ENST00000611614	NDRG4	Q9ULP0	352 aa	Known RBP	13.21	□□□□□ -0.29
COPS7B-223	ENST00000611614	TSC22D4	Q9Y3Q8	395 aa		13.21	□□□□□ -0.29
COPS7B-223	ENST00000611614	FURIN	P09958	794 aa		13.2	□□□□□ -0.3
COPS7B-223	ENST00000611614	GSTT2	P0CG29	244 aa		13.2	□□□□□ -0.3
COPS7B-223	ENST00000611614	GSTT2B	P0CG30	244 aa		13.2	□□□□□ -0.3
COPS7B-223	ENST00000611614	S100A1	P23297	94 aa		13.2	□□□□□ -0.3
COPS7B-223	ENST00000611614	FMO3	P31513	532 aa		13.2	□□□□□ -0.3
COPS7B-223	ENST00000611614	PIK3CB	P42338	1070 aa		13.2	□□□□□ -0.3
COPS7B-223	ENST00000611614	MAP2K4	P45985	399 aa		13.2	□□□□□ -0.3
COPS7B-223	ENST00000611614	MASP1	P48740	699 aa		13.2	□□□□□ -0.3
COPS7B-223	ENST00000611614	NDUFA5	Q16718	116 aa		13.2	□□□□□ -0.3
COPS7B-223	ENST00000611614		Q6ZSR6	202 aa		13.2	□□□□□ -0.3
COPS7B-223	ENST00000611614	SLC22A16	Q86VW1	577 aa		13.2	□□□□□ -0.3
COPS7B-223	ENST00000611614	METTL4	Q8N3J2	472 aa		13.2	□□□□□ -0.3
COPS7B-223	ENST00000611614	CAMKK1	Q8N5S9	505 aa		13.2	□□□□□ -0.3
COPS7B-223	ENST00000611614	ATG16L2	Q8NAA4	619 aa		13.2	□□□□□ -0.3
COPS7B-223	ENST00000611614	OR4K1	Q8NGD4	311 aa		13.2	□□□□□ -0.3
COPS7B-223	ENST00000611614	UBE2E3	Q969T4	207 aa		13.2	□□□□□ -0.3
COPS7B-223	ENST00000611614	FERD3L	Q96RJ6	166 aa		13.2	□□□□□ -0.3
COPS7B-223	ENST00000611614	CHRD	Q9H2X0	955 aa		13.2	□□□□□ -0.3
COPS7B-223	ENST00000611614	MYNN	Q9NPC7	610 aa		13.2	□□□□□ -0.3
COPS7B-223	ENST00000611614	PADI2	Q9Y2J8	665 aa		13.2	□□□□□ -0.3
COPS7B-223	ENST00000611614	SIT1	Q9Y3P8	196 aa		13.2	□□□□□ -0.3
COPS7B-223	ENST00000611614	CFAP20	Q9Y6A4	193 aa	Known RBP	13.2	□□□□□ -0.3
COPS7B-223	ENST00000611614	TMEM229A	B2RXF0	380 aa		13.2	□□□□□ -0.3
COPS7B-223	ENST00000611614	AXIN1	O15169	862 aa		13.2	□□□□□ -0.3
COPS7B-223	ENST00000611614	PI15	O43692	258 aa		13.2	□□□□□ -0.3
COPS7B-223	ENST00000611614	GPR37L1	O60883	481 aa		13.2	□□□□□ -0.3
COPS7B-223	ENST00000611614	FAM20B	O75063	409 aa		13.2	□□□□□ -0.3
COPS7B-223	ENST00000611614	GCM2	O75603	506 aa	Predicted RBP	13.2	□□□□□ -0.3
COPS7B-223	ENST00000611614	UPK1B	O75841	260 aa		13.2	□□□□□ -0.3
COPS7B-223	ENST00000611614	C6orf47	O95873	294 aa		13.2	□□□□□ -0.3
COPS7B-223	ENST00000611614	IGHV4-34	P06331	123 aa		13.2	□□□□□ -0.3
COPS7B-223	ENST00000611614	AQP1	P29972	269 aa		13.2	□□□□□ -0.3
COPS7B-223	ENST00000611614	CRAT	P43155	626 aa		13.2	□□□□□ -0.3
COPS7B-223	ENST00000611614	MVD	P53602	400 aa		13.2	□□□□□ -0.3
COPS7B-223	ENST00000611614	HBA1	P69905	142 aa		13.2	□□□□□ -0.3
COPS7B-223	ENST00000611614	CD300C	Q08708	224 aa		13.2	□□□□□ -0.3

Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms