RNA–Protein interactions for RNA: ENST00000597848.1

CHMP2A-204, Transcript of charged multivesicular body protein 2A, humanhuman

TSL 3

Gene CHMP2A, Length 509 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-204ENST00000597848 SFT2D3Q587I9 215 aa20.75■□□□□ 0.91
CHMP2A-204ENST00000597848 FAM71E1Q6IPT2 247 aa20.75■□□□□ 0.91
CHMP2A-204ENST00000597848 CPEB2Q7Z5Q1 589 aaKnown RBP20.75■□□□□ 0.91
CHMP2A-204ENST00000597848 PARP9Q8IXQ6 854 aa20.75■□□□□ 0.91
CHMP2A-204ENST00000597848 CEP70Q8NHQ1 597 aa20.75■□□□□ 0.91
CHMP2A-204ENST00000597848 DNAJB14Q8TBM8 379 aa20.75■□□□□ 0.91
CHMP2A-204ENST00000597848 ACTRT2Q8TDY3 377 aa20.75■□□□□ 0.91
CHMP2A-204ENST00000597848 THAP4Q8WY91 577 aa20.75■□□□□ 0.91
CHMP2A-204ENST00000597848 GFM2Q969S9 779 aaKnown RBP20.75■□□□□ 0.91
CHMP2A-204ENST00000597848 PNO1Q9NRX1 252 aaKnown RBP20.75■□□□□ 0.91
CHMP2A-204ENST00000597848 FAM53CQ9NYF3 392 aa20.75■□□□□ 0.91
CHMP2A-204ENST00000597848 C5AR2Q9P296 337 aa20.75■□□□□ 0.91
CHMP2A-204ENST00000597848 DCTN4Q9UJW0 460 aa20.75■□□□□ 0.91
CHMP2A-204ENST00000597848 POLHQ9Y253 713 aa20.75■□□□□ 0.91
CHMP2A-204ENST00000597848 SCN2AQ99250 2005 aa20.75■□□□□ 0.91
CHMP2A-204ENST00000597848 ACACBO00763 2458 aa20.75■□□□□ 0.91
CHMP2A-204ENST00000597848 TPRP12270 2363 aaKnown RBP20.74■□□□□ 0.91
CHMP2A-204ENST00000597848 IGHV3-20A0A0C4DH32 117 aa20.74■□□□□ 0.91
CHMP2A-204ENST00000597848 TCRBV16S1A1N1A0A5B0 115 aa20.74■□□□□ 0.91
CHMP2A-204ENST00000597848 TGFBR3LH3BV60 316 aa20.74■□□□□ 0.91
CHMP2A-204ENST00000597848 ERAL1O75616 437 aaKnown RBP20.74■□□□□ 0.91
CHMP2A-204ENST00000597848 LRATO95237 230 aa20.74■□□□□ 0.91
CHMP2A-204ENST00000597848 GPR75O95800 540 aa20.74■□□□□ 0.91
CHMP2A-204ENST00000597848 TROVE2P10155 538 aaKnown RBP eCLIP20.74■□□□□ 0.91
CHMP2A-204ENST00000597848 G6PDP11413 515 aa20.74■□□□□ 0.91
CHMP2A-204ENST00000597848 ALOX15P16050 662 aaPredicted RBP20.74■□□□□ 0.91
CHMP2A-204ENST00000597848 ASMTP46597 345 aa20.74■□□□□ 0.91
CHMP2A-204ENST00000597848 SERTAD2Q14140 314 aa20.74■□□□□ 0.91
CHMP2A-204ENST00000597848 DEFB109BQ30KR1 87 aa20.74■□□□□ 0.91
CHMP2A-204ENST00000597848 SLC48A1Q6P1K1 146 aa20.74■□□□□ 0.91
CHMP2A-204ENST00000597848 IKBIPQ70UQ0 350 aa20.74■□□□□ 0.91
CHMP2A-204ENST00000597848 SPATA19Q7Z5L4 167 aa20.74■□□□□ 0.91
CHMP2A-204ENST00000597848 OR11G2Q8NGC1 345 aa20.74■□□□□ 0.91
CHMP2A-204ENST00000597848 OR4K14Q8NGD5 310 aa20.74■□□□□ 0.91
CHMP2A-204ENST00000597848 PUM2Q8TB72 1066 aaKnown RBP eCLIP20.74■□□□□ 0.91
CHMP2A-204ENST00000597848 KLHL29Q96CT2 875 aa20.74■□□□□ 0.91
CHMP2A-204ENST00000597848 MAELQ96JY0 434 aaKnown RBP20.74■□□□□ 0.91
CHMP2A-204ENST00000597848 OR52B2Q96RD2 323 aa20.74■□□□□ 0.91
CHMP2A-204ENST00000597848 MIEF1Q9NQG6 463 aa20.74■□□□□ 0.91
CHMP2A-204ENST00000597848 FBXL4Q9UKA2 621 aa20.74■□□□□ 0.91
CHMP2A-204ENST00000597848 MAN2B2Q9Y2E5 1009 aa20.74■□□□□ 0.91
CHMP2A-204ENST00000597848 LOC102723996A0A087X1L8 192 aa20.73■□□□□ 0.91
CHMP2A-204ENST00000597848 TNNI3P19429 210 aa20.73■□□□□ 0.91
CHMP2A-204ENST00000597848 DDCP20711 480 aa20.73■□□□□ 0.91
CHMP2A-204ENST00000597848 DIO3P55073 304 aa20.73■□□□□ 0.91
CHMP2A-204ENST00000597848 LSM12Q3MHD2 195 aaKnown RBP20.73■□□□□ 0.91
CHMP2A-204ENST00000597848 OGFOD2Q6N063 350 aa20.73■□□□□ 0.91
CHMP2A-204ENST00000597848 C7orf57Q8NEG2 295 aa20.73■□□□□ 0.91
CHMP2A-204ENST00000597848 RFWD2Q8NHY2 731 aa20.73■□□□□ 0.91
CHMP2A-204ENST00000597848 EXOSC8Q96B26 276 aaKnown RBP20.73■□□□□ 0.91
CHMP2A-204ENST00000597848 EBF4Q9BQW3 602 aa20.73■□□□□ 0.91
CHMP2A-204ENST00000597848 TCF7L2Q9NQB0 619 aa20.73■□□□□ 0.91
CHMP2A-204ENST00000597848 ASIC5Q9NY37 505 aa20.73■□□□□ 0.91
CHMP2A-204ENST00000597848 UTS2RQ9UKP6 389 aa20.73■□□□□ 0.91
CHMP2A-204ENST00000597848 CES1P1Q9UKY3 287 aa20.73■□□□□ 0.91
CHMP2A-204ENST00000597848 G3BP2Q9UN86 482 aaKnown RBP20.73■□□□□ 0.91
CHMP2A-204ENST00000597848 CLDN16Q9Y5I7 305 aa20.73■□□□□ 0.91
CHMP2A-204ENST00000597848 FREM2Q5SZK8 3169 aa20.72■□□□□ 0.91
CHMP2A-204ENST00000597848 ARGFXA6NJG6 315 aa20.72■□□□□ 0.91
CHMP2A-204ENST00000597848 SEC24DO94855 1032 aaPredicted RBP20.72■□□□□ 0.91
CHMP2A-204ENST00000597848 XKP51811 444 aa20.72■□□□□ 0.91
CHMP2A-204ENST00000597848 GNGT1P63211 74 aa20.72■□□□□ 0.91
CHMP2A-204ENST00000597848 SF3A3Q12874 501 aaKnown RBP eCLIP20.72■□□□□ 0.91
CHMP2A-204ENST00000597848 BIKQ13323 160 aa20.72■□□□□ 0.91
CHMP2A-204ENST00000597848 PTGR1Q14914 329 aa20.72■□□□□ 0.91
CHMP2A-204ENST00000597848 C19orf48Q6RUI8 117 aa20.72■□□□□ 0.91
CHMP2A-204ENST00000597848 NDUFAF7Q7L592 441 aa20.72■□□□□ 0.91
CHMP2A-204ENST00000597848 TICAM1Q8IUC6 712 aa20.72■□□□□ 0.91
CHMP2A-204ENST00000597848 CHMP6Q96FZ7 201 aa20.72■□□□□ 0.91
CHMP2A-204ENST00000597848 RBM18Q96H35 190 aaKnown RBP20.72■□□□□ 0.91
CHMP2A-204ENST00000597848 FER1L6-AS2Q96M78 137 aa20.72■□□□□ 0.91
CHMP2A-204ENST00000597848 DGAT2Q96PD7 388 aa20.72■□□□□ 0.91
CHMP2A-204ENST00000597848 ZNF317Q96PQ6 595 aaPredicted RBP20.72■□□□□ 0.91
CHMP2A-204ENST00000597848 LPAR4Q99677 370 aa20.72■□□□□ 0.91
CHMP2A-204ENST00000597848 SIKE1Q9BRV8 207 aa20.72■□□□□ 0.91
CHMP2A-204ENST00000597848 ZNF700Q9H0M5 742 aa20.72■□□□□ 0.91
CHMP2A-204ENST00000597848 REEP4Q9H6H4 257 aa20.72■□□□□ 0.91
CHMP2A-204ENST00000597848 GIMAP4Q9NUV9 329 aa20.72■□□□□ 0.91
CHMP2A-204ENST00000597848 EHD3Q9NZN3 535 aa20.72■□□□□ 0.91
CHMP2A-204ENST00000597848 ZNF780BQ9Y6R6 833 aa20.72■□□□□ 0.91
CHMP2A-204ENST00000597848 IGHV1-45A0A0A0MS14 117 aa20.71■□□□□ 0.91
CHMP2A-204ENST00000597848 NSG1A0A0A6YYJ2 146 aa20.71■□□□□ 0.91
CHMP2A-204ENST00000597848 A0A0G2JND7 137 aa20.71■□□□□ 0.91
CHMP2A-204ENST00000597848 SYNDIG1LA6NDD5 238 aa20.71■□□□□ 0.91
CHMP2A-204ENST00000597848 OR10H2O60403 315 aa20.71■□□□□ 0.91
CHMP2A-204ENST00000597848 COX6A1P12074 109 aa20.71■□□□□ 0.91
CHMP2A-204ENST00000597848 IGLV3-21P80748 117 aaPredicted RBP20.71■□□□□ 0.91
CHMP2A-204ENST00000597848 RPS6KA2Q15349 733 aa20.71■□□□□ 0.91
CHMP2A-204ENST00000597848 PAPD4Q6PIY7 484 aaKnown RBP20.71■□□□□ 0.91
CHMP2A-204ENST00000597848 PPWD1Q96BP3 646 aaKnown RBP20.71■□□□□ 0.91
CHMP2A-204ENST00000597848 RILPQ96NA2 401 aa20.71■□□□□ 0.91
CHMP2A-204ENST00000597848 CATSPER2Q96P56 530 aa20.71■□□□□ 0.91
CHMP2A-204ENST00000597848 CCDC28BQ9BUN5 200 aa20.71■□□□□ 0.91
CHMP2A-204ENST00000597848 ZNF160Q9HCG1 818 aa20.71■□□□□ 0.91
CHMP2A-204ENST00000597848 EXO1Q9UQ84 846 aaKnown RBP20.71■□□□□ 0.91
CHMP2A-204ENST00000597848 NUP210LQ5VU65 1888 aa20.71■□□□□ 0.91
CHMP2A-204ENST00000597848 MASP2O00187 686 aa20.7■□□□□ 0.9
CHMP2A-204ENST00000597848 UBDO15205 165 aa20.7■□□□□ 0.9
CHMP2A-204ENST00000597848 HPP00738 406 aa20.7■□□□□ 0.9
CHMP2A-204ENST00000597848 ALDOCP09972 364 aaKnown RBP20.7■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms