RNA–Protein interactions for RNA: ENST00000585370.1

LIG3-203, Transcript of DNA ligase 3, humanhuman

TSL 3

Gene LIG3, Length 235 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-203ENST00000585370 PHF11Q9UIL8 331 aa9.85□□□□□ -0.83
LIG3-203ENST00000585370 RPS6KA6Q9UK32 745 aa9.85□□□□□ -0.83
LIG3-203ENST00000585370 POMT2Q9UKY4 750 aa9.85□□□□□ -0.83
LIG3-203ENST00000585370 SAMD4AQ9UPU9 718 aaKnown RBP9.85□□□□□ -0.83
LIG3-203ENST00000585370 ASB4Q9Y574 426 aa9.85□□□□□ -0.83
LIG3-203ENST00000585370 ADAMTS20P59510 1910 aa9.85□□□□□ -0.83
LIG3-203ENST00000585370 B4DGG1 531 aa9.84□□□□□ -0.83
LIG3-203ENST00000585370 SRPX2O60687 465 aaPredicted RBP9.84□□□□□ -0.83
LIG3-203ENST00000585370 DEAF1O75398 565 aaPredicted RBP9.84□□□□□ -0.83
LIG3-203ENST00000585370 UBXN7O94888 489 aa9.84□□□□□ -0.83
LIG3-203ENST00000585370 LDLRP01130 860 aa9.84□□□□□ -0.83
LIG3-203ENST00000585370 IFNA14P01570 189 aa9.84□□□□□ -0.83
LIG3-203ENST00000585370 CELA2BP08218 269 aaPredicted RBP9.84□□□□□ -0.83
LIG3-203ENST00000585370 MAGP20916 626 aa9.84□□□□□ -0.83
LIG3-203ENST00000585370 PEX2P28328 305 aa9.84□□□□□ -0.83
LIG3-203ENST00000585370 NTSP30990 170 aa9.84□□□□□ -0.83
LIG3-203ENST00000585370 TLX1P31314 330 aaPredicted RBP9.84□□□□□ -0.83
LIG3-203ENST00000585370 CHI3L1P36222 383 aaPredicted RBP9.84□□□□□ -0.83
LIG3-203ENST00000585370 ANXA11P50995 505 aaKnown RBP9.84□□□□□ -0.83
LIG3-203ENST00000585370 PCBP4P57723 403 aaKnown RBP9.84□□□□□ -0.83
LIG3-203ENST00000585370 SKP1P63208 163 aa9.84□□□□□ -0.83
LIG3-203ENST00000585370 TCEA2Q15560 299 aa9.84□□□□□ -0.83
LIG3-203ENST00000585370 ATP6AP1Q15904 470 aa9.84□□□□□ -0.83
LIG3-203ENST00000585370 NDUFAF5Q5TEU4 345 aa9.84□□□□□ -0.83
LIG3-203ENST00000585370 LPCAT4Q643R3 524 aa9.84□□□□□ -0.83
LIG3-203ENST00000585370 BHLHB9Q6PI77 547 aa9.84□□□□□ -0.83
LIG3-203ENST00000585370 RNF44Q7L0R7 432 aa9.84□□□□□ -0.83
LIG3-203ENST00000585370 VN1R4Q7Z5H5 301 aa9.84□□□□□ -0.83
LIG3-203ENST00000585370 FAM20CQ8IXL6 584 aa9.84□□□□□ -0.83
LIG3-203ENST00000585370 ZZZ3Q8IYH5 903 aa9.84□□□□□ -0.83
LIG3-203ENST00000585370 CARFQ8N187 725 aa9.84□□□□□ -0.83
LIG3-203ENST00000585370 C11orf65Q8NCR3 313 aa9.84□□□□□ -0.83
LIG3-203ENST00000585370 PATE1Q8WXA2 126 aa9.84□□□□□ -0.83
LIG3-203ENST00000585370 LRTOMTQ8WZ04 291 aa9.84□□□□□ -0.83
LIG3-203ENST00000585370 EME1Q96AY2 570 aa9.84□□□□□ -0.83
LIG3-203ENST00000585370 MOAP1Q96BY2 351 aa9.84□□□□□ -0.83
LIG3-203ENST00000585370 AURKBQ96GD4 344 aaPredicted RBP9.84□□□□□ -0.83
LIG3-203ENST00000585370 CD180Q99467 661 aa9.84□□□□□ -0.83
LIG3-203ENST00000585370 SLC38A3Q99624 504 aa9.84□□□□□ -0.83
LIG3-203ENST00000585370 SLC35A5Q9BS91 424 aa9.84□□□□□ -0.83
LIG3-203ENST00000585370 C9orf16Q9BUW7 83 aa9.84□□□□□ -0.83
LIG3-203ENST00000585370 CHID1Q9BWS9 393 aa9.84□□□□□ -0.83
LIG3-203ENST00000585370 RAB33BQ9H082 229 aa9.84□□□□□ -0.83
LIG3-203ENST00000585370 KLHL31Q9H511 634 aa9.84□□□□□ -0.83
LIG3-203ENST00000585370 TMEM38AQ9H6F2 299 aa9.84□□□□□ -0.83
LIG3-203ENST00000585370 SLC35C2Q9NQQ7 365 aa9.84□□□□□ -0.83
LIG3-203ENST00000585370 AGPAT4Q9NRZ5 378 aa9.84□□□□□ -0.83
LIG3-203ENST00000585370 C1GALT1Q9NS00 363 aa9.84□□□□□ -0.83
LIG3-203ENST00000585370 EPHA6Q9UF33 1036 aa9.84□□□□□ -0.83
LIG3-203ENST00000585370 RAB26Q9ULW5 256 aa9.84□□□□□ -0.83
LIG3-203ENST00000585370 ZNF451Q9Y4E5 1061 aa9.84□□□□□ -0.83
LIG3-203ENST00000585370 HEATR5BQ9P2D3 2071 aa9.84□□□□□ -0.83
LIG3-203ENST00000585370 ARID1BQ8NFD5 2236 aaPredicted RBP9.83□□□□□ -0.84
LIG3-203ENST00000585370 FAM149AA5PLN7 773 aa9.83□□□□□ -0.84
LIG3-203ENST00000585370 TRABD2BA6NFA1 517 aa9.83□□□□□ -0.84
LIG3-203ENST00000585370 CLOCKO15516 846 aa9.83□□□□□ -0.84
LIG3-203ENST00000585370 PROM1O43490 865 aa9.83□□□□□ -0.84
LIG3-203ENST00000585370 B3GALT2O43825 422 aa9.83□□□□□ -0.84
LIG3-203ENST00000585370 NOBOXO60393 691 aa9.83□□□□□ -0.84
LIG3-203ENST00000585370 TIPRLO75663 272 aa9.83□□□□□ -0.84
LIG3-203ENST00000585370 PIAS2O75928 621 aa9.83□□□□□ -0.84
LIG3-203ENST00000585370 UQCRBP14927 111 aa9.83□□□□□ -0.84
LIG3-203ENST00000585370 KDELR2P33947 212 aa9.83□□□□□ -0.84
LIG3-203ENST00000585370 MPIP34949 423 aa9.83□□□□□ -0.84
LIG3-203ENST00000585370 PCGF2P35227 344 aa9.83□□□□□ -0.84
LIG3-203ENST00000585370 BUD31P41223 144 aaPredicted RBP9.83□□□□□ -0.84
LIG3-203ENST00000585370 GRK6P43250 576 aa9.83□□□□□ -0.84
LIG3-203ENST00000585370 ALDH9A1P49189 494 aa9.83□□□□□ -0.84
LIG3-203ENST00000585370 ARRB1P49407 418 aaPredicted RBP9.83□□□□□ -0.84
LIG3-203ENST00000585370 PRIM2P49643 509 aa9.83□□□□□ -0.84
LIG3-203ENST00000585370 CCT8P50990 548 aa9.83□□□□□ -0.84
LIG3-203ENST00000585370 CLCN2P51788 898 aa9.83□□□□□ -0.84
LIG3-203ENST00000585370 BTN3A2P78410 334 aa9.83□□□□□ -0.84
LIG3-203ENST00000585370 CAMK2BQ13554 666 aa9.83□□□□□ -0.84
LIG3-203ENST00000585370 MYBPC3Q14896 1274 aa9.83□□□□□ -0.84
LIG3-203ENST00000585370 SHBQ15464 509 aa9.83□□□□□ -0.84
LIG3-203ENST00000585370 ZNF630Q2M218 657 aaPredicted RBP9.83□□□□□ -0.84
LIG3-203ENST00000585370 MPEG1Q2M385 716 aa9.83□□□□□ -0.84
LIG3-203ENST00000585370 C14orf28Q4W4Y0 310 aa9.83□□□□□ -0.84
LIG3-203ENST00000585370 TMTC4Q5T4D3 741 aa9.83□□□□□ -0.84
LIG3-203ENST00000585370 GCNT6Q5T4J0 391 aa9.83□□□□□ -0.84
LIG3-203ENST00000585370 PPP4R4Q6NUP7 873 aa9.83□□□□□ -0.84
LIG3-203ENST00000585370 ZNF793Q6ZN11 406 aa9.83□□□□□ -0.84
LIG3-203ENST00000585370 ZBTB49Q6ZSB9 765 aa9.83□□□□□ -0.84
LIG3-203ENST00000585370 METTL25Q8N6Q8 603 aa9.83□□□□□ -0.84
LIG3-203ENST00000585370 UTP15Q8TED0 518 aaKnown RBP9.83□□□□□ -0.84
LIG3-203ENST00000585370 NCLNQ969V3 563 aa9.83□□□□□ -0.84
LIG3-203ENST00000585370 CIDECQ96AQ7 238 aaPredicted RBP9.83□□□□□ -0.84
LIG3-203ENST00000585370 NEURL3Q96EH8 262 aa9.83□□□□□ -0.84
LIG3-203ENST00000585370 TCTN2Q96GX1 697 aa9.83□□□□□ -0.84
LIG3-203ENST00000585370 PYURFQ96I23 114 aa9.83□□□□□ -0.84
LIG3-203ENST00000585370 NR1H4Q96RI1 486 aaPredicted RBP9.83□□□□□ -0.84
LIG3-203ENST00000585370 BBS4Q96RK4 519 aa9.83□□□□□ -0.84
LIG3-203ENST00000585370 DPH2Q9BQC3 489 aaPredicted RBP9.83□□□□□ -0.84
LIG3-203ENST00000585370 NPLQ9BXD5 320 aaPredicted RBP9.83□□□□□ -0.84
LIG3-203ENST00000585370 ASPSCR1Q9BZE9 553 aa9.83□□□□□ -0.84
LIG3-203ENST00000585370 AICDAQ9GZX7 198 aa9.83□□□□□ -0.84
LIG3-203ENST00000585370 CHST8Q9H2A9 424 aa9.83□□□□□ -0.84
LIG3-203ENST00000585370 CLK4Q9HAZ1 481 aaKnown RBP9.83□□□□□ -0.84
LIG3-203ENST00000585370 LYRM4Q9HD34 91 aa9.83□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms