RNA–Protein interactions for RNA: ENST00000581708.5

CDK5RAP3-222, Transcript of CDK5 regulatory subunit associated protein 3, human

TSL 4

Gene CDK5RAP3, Length 543 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDK5RAP3-222	ENST00000581708	UHMK1	Q8TAS1	419 aa	Known RBP	11.71	□□□□□ -0.53
CDK5RAP3-222	ENST00000581708	NUBPL	Q8TB37	319 aa		11.71	□□□□□ -0.53
CDK5RAP3-222	ENST00000581708	CCDC126	Q96EE4	140 aa		11.71	□□□□□ -0.53
CDK5RAP3-222	ENST00000581708	DGAT2	Q96PD7	388 aa		11.71	□□□□□ -0.53
CDK5RAP3-222	ENST00000581708	RHOXF2	Q9BQY4	288 aa		11.71	□□□□□ -0.53
CDK5RAP3-222	ENST00000581708	ERVK-6	Q9BXR3	956 aa		11.71	□□□□□ -0.53
CDK5RAP3-222	ENST00000581708	BRF2	Q9HAW0	419 aa		11.71	□□□□□ -0.53
CDK5RAP3-222	ENST00000581708	ZBTB26	Q9HCK0	441 aa		11.71	□□□□□ -0.53
CDK5RAP3-222	ENST00000581708	TIMMDC1	Q9NPL8	285 aa		11.71	□□□□□ -0.53
CDK5RAP3-222	ENST00000581708	DCDC2	Q9UHG0	476 aa		11.71	□□□□□ -0.53
CDK5RAP3-222	ENST00000581708	SNX6	Q9UNH7	406 aa		11.71	□□□□□ -0.53
CDK5RAP3-222	ENST00000581708	ATG4B	Q9Y4P1	393 aa		11.71	□□□□□ -0.53
CDK5RAP3-222	ENST00000581708	ASB4	Q9Y574	426 aa		11.71	□□□□□ -0.53
CDK5RAP3-222	ENST00000581708	DIDO1	Q9BTC0	2240 aa	Known RBP	11.71	□□□□□ -0.54
CDK5RAP3-222	ENST00000581708	TMEM200C	A6NKL6	621 aa		11.7	□□□□□ -0.54
CDK5RAP3-222	ENST00000581708		A8MT66	165 aa		11.7	□□□□□ -0.54
CDK5RAP3-222	ENST00000581708	FGF17	O60258	216 aa		11.7	□□□□□ -0.54
CDK5RAP3-222	ENST00000581708	LDB3	O75112	727 aa		11.7	□□□□□ -0.54
CDK5RAP3-222	ENST00000581708	SBK3	P0C264	359 aa		11.7	□□□□□ -0.54
CDK5RAP3-222	ENST00000581708	NR2F6	P10588	404 aa		11.7	□□□□□ -0.54
CDK5RAP3-222	ENST00000581708	HSD3B1	P14060	373 aa		11.7	□□□□□ -0.54
CDK5RAP3-222	ENST00000581708	ALOX15	P16050	662 aa	Predicted RBP	11.7	□□□□□ -0.54
CDK5RAP3-222	ENST00000581708	ZNF24	P17028	368 aa		11.7	□□□□□ -0.54
CDK5RAP3-222	ENST00000581708	ATP5F1	P24539	256 aa	Predicted RBP	11.7	□□□□□ -0.54
CDK5RAP3-222	ENST00000581708	HSD3B2	P26439	372 aa		11.7	□□□□□ -0.54
CDK5RAP3-222	ENST00000581708	HNRNPH2	P55795	449 aa	Known RBP	11.7	□□□□□ -0.54
CDK5RAP3-222	ENST00000581708	RNF4	P78317	190 aa		11.7	□□□□□ -0.54
CDK5RAP3-222	ENST00000581708	SPRED3	Q2MJR0	410 aa		11.7	□□□□□ -0.54
CDK5RAP3-222	ENST00000581708	OR52E8	Q6IFG1	317 aa		11.7	□□□□□ -0.54
CDK5RAP3-222	ENST00000581708	OPN5	Q6U736	354 aa		11.7	□□□□□ -0.54
CDK5RAP3-222	ENST00000581708		Q6ZPB1	254 aa	Predicted RBP	11.7	□□□□□ -0.54
CDK5RAP3-222	ENST00000581708	RGS9BP	Q6ZS82	235 aa		11.7	□□□□□ -0.54
CDK5RAP3-222	ENST00000581708	ZNF227	Q86WZ6	799 aa		11.7	□□□□□ -0.54
CDK5RAP3-222	ENST00000581708	SIAH3	Q8IW03	269 aa		11.7	□□□□□ -0.54
CDK5RAP3-222	ENST00000581708	DND1	Q8IYX4	353 aa	Known RBP	11.7	□□□□□ -0.54
CDK5RAP3-222	ENST00000581708	SLC15A4	Q8N697	577 aa		11.7	□□□□□ -0.54
CDK5RAP3-222	ENST00000581708	ZFP62	Q8NB50	900 aa	Predicted RBP	11.7	□□□□□ -0.54
CDK5RAP3-222	ENST00000581708	GOLM1	Q8NBJ4	401 aa		11.7	□□□□□ -0.54
CDK5RAP3-222	ENST00000581708	SLC2A12	Q8TD20	617 aa		11.7	□□□□□ -0.54
CDK5RAP3-222	ENST00000581708	SENP5	Q96HI0	755 aa	Predicted RBP	11.7	□□□□□ -0.54
CDK5RAP3-222	ENST00000581708	FBXL20	Q96IG2	436 aa		11.7	□□□□□ -0.54
CDK5RAP3-222	ENST00000581708	SGCZ	Q96LD1	299 aa		11.7	□□□□□ -0.54
CDK5RAP3-222	ENST00000581708	OR8D2	Q9GZM6	311 aa		11.7	□□□□□ -0.54
CDK5RAP3-222	ENST00000581708	ELOVL6	Q9H5J4	265 aa		11.7	□□□□□ -0.54
CDK5RAP3-222	ENST00000581708	SUCO	Q9UBS9	1254 aa	Known RBP	11.7	□□□□□ -0.54
CDK5RAP3-222	ENST00000581708	TRPS1	Q9UHF7	1281 aa		11.7	□□□□□ -0.54
CDK5RAP3-222	ENST00000581708	ZNF835	Q9Y2P0	537 aa		11.7	□□□□□ -0.54
CDK5RAP3-222	ENST00000581708		A0A1W2PR48	441 aa		11.69	□□□□□ -0.54
CDK5RAP3-222	ENST00000581708	ARHGAP10	A1A4S6	786 aa		11.69	□□□□□ -0.54
CDK5RAP3-222	ENST00000581708	CCDC151	A5D8V7	595 aa		11.69	□□□□□ -0.54
CDK5RAP3-222	ENST00000581708	OR6C76	A6NM76	312 aa		11.69	□□□□□ -0.54
CDK5RAP3-222	ENST00000581708		A8MVJ9	347 aa		11.69	□□□□□ -0.54
CDK5RAP3-222	ENST00000581708		H3BQF6	201 aa		11.69	□□□□□ -0.54
CDK5RAP3-222	ENST00000581708	ASNA1	O43681	348 aa		11.69	□□□□□ -0.54
CDK5RAP3-222	ENST00000581708	TMPRSS11D	O60235	418 aa		11.69	□□□□□ -0.54
CDK5RAP3-222	ENST00000581708	SLC19A2	O60779	497 aa		11.69	□□□□□ -0.54
CDK5RAP3-222	ENST00000581708	SH3BGRL	O75368	114 aa		11.69	□□□□□ -0.54
CDK5RAP3-222	ENST00000581708	EED	O75530	441 aa	Known RBP	11.69	□□□□□ -0.54
CDK5RAP3-222	ENST00000581708	OR2J2	O76002	312 aa		11.69	□□□□□ -0.54
CDK5RAP3-222	ENST00000581708	IGKV3-11	P04433	115 aa		11.69	□□□□□ -0.54
CDK5RAP3-222	ENST00000581708	FAM153B	P0C7A2	387 aa		11.69	□□□□□ -0.54
CDK5RAP3-222	ENST00000581708	SLC35E2	P0CK97	266 aa		11.69	□□□□□ -0.54
CDK5RAP3-222	ENST00000581708	IMPDH1	P20839	514 aa		11.69	□□□□□ -0.54
CDK5RAP3-222	ENST00000581708	HSD17B3	P37058	310 aa		11.69	□□□□□ -0.54
CDK5RAP3-222	ENST00000581708	CA7	P43166	264 aa		11.69	□□□□□ -0.54
CDK5RAP3-222	ENST00000581708	NEK2	P51955	445 aa		11.69	□□□□□ -0.54
CDK5RAP3-222	ENST00000581708	KCNK10	P57789	538 aa		11.69	□□□□□ -0.54
CDK5RAP3-222	ENST00000581708	FOLH1	Q04609	750 aa		11.69	□□□□□ -0.54
CDK5RAP3-222	ENST00000581708	SRSF11	Q05519	484 aa	Known RBP	11.69	□□□□□ -0.54
CDK5RAP3-222	ENST00000581708	FAM153C	Q494X1	144 aa		11.69	□□□□□ -0.54
CDK5RAP3-222	ENST00000581708	RPTN	Q6XPR3	784 aa		11.69	□□□□□ -0.54
CDK5RAP3-222	ENST00000581708	PNPLA5	Q7Z6Z6	429 aa	Predicted RBP	11.69	□□□□□ -0.54
CDK5RAP3-222	ENST00000581708	TDRP	Q86YL5	185 aa		11.69	□□□□□ -0.54
CDK5RAP3-222	ENST00000581708	HOMEZ	Q8IX15	550 aa		11.69	□□□□□ -0.54
CDK5RAP3-222	ENST00000581708	SLC34A3	Q8N130	599 aa		11.69	□□□□□ -0.54
CDK5RAP3-222	ENST00000581708	EID3	Q8N140	333 aa		11.69	□□□□□ -0.54
CDK5RAP3-222	ENST00000581708	GHDC	Q8N2G8	530 aa		11.69	□□□□□ -0.54
CDK5RAP3-222	ENST00000581708	METTL4	Q8N3J2	472 aa		11.69	□□□□□ -0.54
CDK5RAP3-222	ENST00000581708	RNF175	Q8N4F7	328 aa		11.69	□□□□□ -0.54
CDK5RAP3-222	ENST00000581708	OR4F6	Q8NGB9	312 aa		11.69	□□□□□ -0.54
CDK5RAP3-222	ENST00000581708	C16orf52	Q8NHV5	167 aa		11.69	□□□□□ -0.54
CDK5RAP3-222	ENST00000581708	ZNF721	Q8TF20	911 aa		11.69	□□□□□ -0.54
CDK5RAP3-222	ENST00000581708	ASB15	Q8WXK1	588 aa		11.69	□□□□□ -0.54
CDK5RAP3-222	ENST00000581708	MAGED4	Q96JG8	741 aa		11.69	□□□□□ -0.54
CDK5RAP3-222	ENST00000581708	NSUN5	Q96P11	429 aa	Known RBP	11.69	□□□□□ -0.54
CDK5RAP3-222	ENST00000581708	RASL10B	Q96S79	203 aa		11.69	□□□□□ -0.54
CDK5RAP3-222	ENST00000581708	ZNF382	Q96SR6	550 aa		11.69	□□□□□ -0.54
CDK5RAP3-222	ENST00000581708	SORBS1	Q9BX66	1292 aa	Known RBP	11.69	□□□□□ -0.54
CDK5RAP3-222	ENST00000581708	HES7	Q9BYE0	225 aa		11.69	□□□□□ -0.54
CDK5RAP3-222	ENST00000581708	SEMA4B	Q9NPR2	832 aa	Predicted RBP	11.69	□□□□□ -0.54
CDK5RAP3-222	ENST00000581708	HPF1	Q9NWY4	346 aa		11.69	□□□□□ -0.54
CDK5RAP3-222	ENST00000581708	TMEM216	Q9P0N5	145 aa		11.69	□□□□□ -0.54
CDK5RAP3-222	ENST00000581708	ERVK-11	Q9UQG0	969 aa		11.69	□□□□□ -0.54
CDK5RAP3-222	ENST00000581708	TEX15	Q9BXT5	2789 aa		11.69	□□□□□ -0.54
CDK5RAP3-222	ENST00000581708	ETHE1	O95571	254 aa		11.68	□□□□□ -0.54
CDK5RAP3-222	ENST00000581708	KRT6A	P02538	564 aa		11.68	□□□□□ -0.54
CDK5RAP3-222	ENST00000581708	KRT6B	P04259	564 aa		11.68	□□□□□ -0.54
CDK5RAP3-222	ENST00000581708	RNF224	P0DH78	156 aa		11.68	□□□□□ -0.54
CDK5RAP3-222	ENST00000581708	KRT6C	P48668	564 aa		11.68	□□□□□ -0.54
CDK5RAP3-222	ENST00000581708	HK2	P52789	917 aa		11.68	□□□□□ -0.54

Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms