RNA–Protein interactions for RNA: ENST00000575663.5

SMG6-219, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 574 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-219ENST00000575663 PALM2Q8IXS6 379 aa5.38□□□□□ -1.55
SMG6-219ENST00000575663 RNF10Q8N5U6 811 aaKnown RBP5.38□□□□□ -1.55
SMG6-219ENST00000575663 SLC15A4Q8N697 577 aa5.38□□□□□ -1.55
SMG6-219ENST00000575663 ZNF611Q8N823 705 aa5.38□□□□□ -1.55
SMG6-219ENST00000575663 C7orf57Q8NEG2 295 aa5.38□□□□□ -1.55
SMG6-219ENST00000575663 ABHD11Q8NFV4 315 aa5.38□□□□□ -1.55
SMG6-219ENST00000575663 NUBPLQ8TB37 319 aa5.38□□□□□ -1.55
SMG6-219ENST00000575663 SLC2A12Q8TD20 617 aa5.38□□□□□ -1.55
SMG6-219ENST00000575663 IGFBPL1Q8WX77 278 aa5.38□□□□□ -1.55
SMG6-219ENST00000575663 KCNJ9Q92806 393 aa5.38□□□□□ -1.55
SMG6-219ENST00000575663 ABTB1Q969K4 478 aaPredicted RBP5.38□□□□□ -1.55
SMG6-219ENST00000575663 GTPBP3Q969Y2 492 aaKnown RBP5.38□□□□□ -1.55
SMG6-219ENST00000575663 INTS12Q96CB8 462 aaKnown RBP5.38□□□□□ -1.55
SMG6-219ENST00000575663 ZMYND19Q96E35 227 aaPredicted RBP5.38□□□□□ -1.55
SMG6-219ENST00000575663 ZC3HAV1LQ96H79 300 aaKnown RBP5.38□□□□□ -1.55
SMG6-219ENST00000575663 WDYHV1Q96HA8 205 aa5.38□□□□□ -1.55
SMG6-219ENST00000575663 ART5Q96L15 291 aa5.38□□□□□ -1.55
SMG6-219ENST00000575663 WFIKKN1Q96NZ8 548 aa5.38□□□□□ -1.55
SMG6-219ENST00000575663 KCNK17Q96T54 332 aa5.38□□□□□ -1.55
SMG6-219ENST00000575663 SGPP1Q9BX95 441 aa5.38□□□□□ -1.55
SMG6-219ENST00000575663 NPLQ9BXD5 320 aaPredicted RBP5.38□□□□□ -1.55
SMG6-219ENST00000575663 UGT2B28Q9BY64 529 aa5.38□□□□□ -1.55
SMG6-219ENST00000575663 ANGPTL4Q9BY76 406 aa5.38□□□□□ -1.55
SMG6-219ENST00000575663 PLA2G12AQ9BZM1 189 aa5.38□□□□□ -1.55
SMG6-219ENST00000575663 IL22Q9GZX6 179 aa5.38□□□□□ -1.55
SMG6-219ENST00000575663 SH2D2AQ9NP31 389 aa5.38□□□□□ -1.55
SMG6-219ENST00000575663 CHRAC1Q9NRG0 131 aa5.38□□□□□ -1.55
SMG6-219ENST00000575663 TREX1Q9NSU2 369 aa5.38□□□□□ -1.55
SMG6-219ENST00000575663 SDAD1Q9NVU7 687 aaKnown RBP eCLIP5.38□□□□□ -1.55
SMG6-219ENST00000575663 KLHL42Q9P2K6 505 aa5.38□□□□□ -1.55
SMG6-219ENST00000575663 SH2B3Q9UQQ2 575 aa5.38□□□□□ -1.55
SMG6-219ENST00000575663 SLC6A5Q9Y345 797 aa5.38□□□□□ -1.55
SMG6-219ENST00000575663 CHCHD2Q9Y6H1 151 aaPredicted RBP5.38□□□□□ -1.55
SMG6-219ENST00000575663 IKBKGQ9Y6K9 419 aa5.38□□□□□ -1.55
SMG6-219ENST00000575663 BTNL10A8MVZ5 291 aa5.37□□□□□ -1.55
SMG6-219ENST00000575663 CAPN14A8MX76 684 aa5.37□□□□□ -1.55
SMG6-219ENST00000575663 C17orf105B2RV13 164 aa5.37□□□□□ -1.55
SMG6-219ENST00000575663 C16orf97H3BN30 126 aa5.37□□□□□ -1.55
SMG6-219ENST00000575663 AP3B1O00203 1094 aa5.37□□□□□ -1.55
SMG6-219ENST00000575663 UBFD1O14562 309 aaKnown RBP5.37□□□□□ -1.55
SMG6-219ENST00000575663 TP53I11O14683 189 aa5.37□□□□□ -1.55
SMG6-219ENST00000575663 HS3ST1O14792 307 aa5.37□□□□□ -1.55
SMG6-219ENST00000575663 KCNAB3O43448 404 aa5.37□□□□□ -1.55
SMG6-219ENST00000575663 B3GALT2O43825 422 aa5.37□□□□□ -1.55
SMG6-219ENST00000575663 ZNF354AO60765 605 aaPredicted RBP5.37□□□□□ -1.55
SMG6-219ENST00000575663 TRIM3O75382 744 aaPredicted RBP5.37□□□□□ -1.55
SMG6-219ENST00000575663 SNX4O95219 450 aa5.37□□□□□ -1.55
SMG6-219ENST00000575663 VAPBO95292 243 aa5.37□□□□□ -1.55
SMG6-219ENST00000575663 ACTL6AO96019 429 aa5.37□□□□□ -1.55
SMG6-219ENST00000575663 PGRP06401 933 aa5.37□□□□□ -1.55
SMG6-219ENST00000575663 C8GP07360 202 aa5.37□□□□□ -1.55
SMG6-219ENST00000575663 SERPINA6P08185 405 aa5.37□□□□□ -1.55
SMG6-219ENST00000575663 HIST1H2AGP0C0S8 130 aaPredicted RBP5.37□□□□□ -1.55
SMG6-219ENST00000575663 SRD5A1P18405 259 aa5.37□□□□□ -1.55
SMG6-219ENST00000575663 HIST1H2ADP20671 130 aa5.37□□□□□ -1.55
SMG6-219ENST00000575663 HNF1AP20823 631 aa5.37□□□□□ -1.55
SMG6-219ENST00000575663 CCKARP32238 428 aa5.37□□□□□ -1.55
SMG6-219ENST00000575663 UGT2B10P36537 528 aa5.37□□□□□ -1.55
SMG6-219ENST00000575663 GRIA1P42261 906 aa5.37□□□□□ -1.55
SMG6-219ENST00000575663 TMED10P49755 219 aaKnown RBP5.37□□□□□ -1.55
SMG6-219ENST00000575663 CASP9P55211 416 aa5.37□□□□□ -1.55
SMG6-219ENST00000575663 RWDD2BP57060 319 aa5.37□□□□□ -1.55
SMG6-219ENST00000575663 ETF1P62495 437 aaKnown RBP5.37□□□□□ -1.55
SMG6-219ENST00000575663 RPP38P78345 283 aaKnown RBP5.37□□□□□ -1.55
SMG6-219ENST00000575663 BTN3A2P78410 334 aa5.37□□□□□ -1.55
SMG6-219ENST00000575663 REEP5Q00765 189 aa5.37□□□□□ -1.55
SMG6-219ENST00000575663 KIF5AQ12840 1032 aa5.37□□□□□ -1.55
SMG6-219ENST00000575663 EFTUD2Q15029 972 aaKnown RBP eCLIP5.37□□□□□ -1.55
SMG6-219ENST00000575663 KBTBD12Q3ZCT8 623 aa5.37□□□□□ -1.55
SMG6-219ENST00000575663 HSP90B2PQ58FF3 399 aa5.37□□□□□ -1.55
SMG6-219ENST00000575663 TOR1AIP1Q5JTV8 583 aa5.37□□□□□ -1.55
SMG6-219ENST00000575663 DCST1Q5T197 706 aa5.37□□□□□ -1.55
SMG6-219ENST00000575663 OR2A2Q6IF42 318 aa5.37□□□□□ -1.55
SMG6-219ENST00000575663 ENPP6Q6UWR7 440 aa5.37□□□□□ -1.55
SMG6-219ENST00000575663 C12orf54Q6X4T0 127 aa5.37□□□□□ -1.55
SMG6-219ENST00000575663 SLC29A4Q7RTT9 530 aa5.37□□□□□ -1.55
SMG6-219ENST00000575663 P4HA3Q7Z4N8 544 aa5.37□□□□□ -1.55
SMG6-219ENST00000575663 PACS2Q86VP3 889 aa5.37□□□□□ -1.55
SMG6-219ENST00000575663 GRAMD2AQ8IUY3 354 aa5.37□□□□□ -1.55
SMG6-219ENST00000575663 TTLQ8NG68 377 aa5.37□□□□□ -1.55
SMG6-219ENST00000575663 OR10G3Q8NGC4 313 aa5.37□□□□□ -1.55
SMG6-219ENST00000575663 OR4K1Q8NGD4 311 aa5.37□□□□□ -1.55
SMG6-219ENST00000575663 PTPMT1Q8WUK0 201 aaPredicted RBP5.37□□□□□ -1.55
SMG6-219ENST00000575663 SLC5A11Q8WWX8 675 aa5.37□□□□□ -1.55
SMG6-219ENST00000575663 DIO2Q92813 273 aa5.37□□□□□ -1.55
SMG6-219ENST00000575663 WNT2BQ93097 391 aa5.37□□□□□ -1.55
SMG6-219ENST00000575663 GAL3ST3Q96A11 431 aa5.37□□□□□ -1.55
SMG6-219ENST00000575663 SNF8Q96H20 258 aa5.37□□□□□ -1.55
SMG6-219ENST00000575663 HIST1H2AHQ96KK5 128 aa5.37□□□□□ -1.55
SMG6-219ENST00000575663 GAL3ST4Q96RP7 486 aa5.37□□□□□ -1.55
SMG6-219ENST00000575663 KRT12Q99456 494 aa5.37□□□□□ -1.55
SMG6-219ENST00000575663 HIST1H2AJQ99878 128 aa5.37□□□□□ -1.55
SMG6-219ENST00000575663 AIF1LQ9BQI0 150 aa5.37□□□□□ -1.55
SMG6-219ENST00000575663 PIGQQ9BRB3 760 aa5.37□□□□□ -1.55
SMG6-219ENST00000575663 SLC39A3Q9BRY0 314 aa5.37□□□□□ -1.55
SMG6-219ENST00000575663 H2AFJQ9BTM1 129 aa5.37□□□□□ -1.55
SMG6-219ENST00000575663 ALOXE3Q9BYJ1 711 aa5.37□□□□□ -1.55
SMG6-219ENST00000575663 UBQLN3Q9H347 655 aa5.37□□□□□ -1.55
SMG6-219ENST00000575663 COPS7BQ9H9Q2 264 aaPredicted RBP5.37□□□□□ -1.55
SMG6-219ENST00000575663 NHEJ1Q9H9Q4 299 aaPredicted RBP5.37□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms