RNA–Protein interactions for RNA: ENST00000574964.1

NPLOC4-218, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 4

Gene NPLOC4, Length 572 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-218ENST00000574964 IKBIPQ70UQ0 350 aa13.62□□□□□ -0.23
NPLOC4-218ENST00000574964 LARP4Q71RC2 724 aaKnown RBP eCLIP13.62□□□□□ -0.235e-6■■□□□ 12.4
NPLOC4-218ENST00000574964 CPEB2Q7Z5Q1 589 aaKnown RBP13.62□□□□□ -0.23
NPLOC4-218ENST00000574964 ANKRD37Q7Z713 158 aa13.62□□□□□ -0.23
NPLOC4-218ENST00000574964 SCUBE1Q8IWY4 988 aa13.62□□□□□ -0.23
NPLOC4-218ENST00000574964 LRRC34Q8IZ02 419 aa13.62□□□□□ -0.23
NPLOC4-218ENST00000574964 FAM9CQ8IZT9 166 aa13.62□□□□□ -0.23
NPLOC4-218ENST00000574964 OR4K14Q8NGD5 310 aa13.62□□□□□ -0.23
NPLOC4-218ENST00000574964 CEP70Q8NHQ1 597 aa13.62□□□□□ -0.23
NPLOC4-218ENST00000574964 CLHC1Q8NHS4 586 aa13.62□□□□□ -0.23
NPLOC4-218ENST00000574964 ADAMTS17Q8TE56 1095 aa13.62□□□□□ -0.23
NPLOC4-218ENST00000574964 UCN3Q969E3 161 aa13.62□□□□□ -0.23
NPLOC4-218ENST00000574964 GFM2Q969S9 779 aaKnown RBP13.62□□□□□ -0.23
NPLOC4-218ENST00000574964 KLHL29Q96CT2 875 aa13.62□□□□□ -0.23
NPLOC4-218ENST00000574964 FCRL1Q96LA6 429 aa13.62□□□□□ -0.23
NPLOC4-218ENST00000574964 FER1L6-AS2Q96M78 137 aa13.62□□□□□ -0.23
NPLOC4-218ENST00000574964 CATSPER2Q96P56 530 aa13.62□□□□□ -0.23
NPLOC4-218ENST00000574964 LPAR4Q99677 370 aa13.62□□□□□ -0.23
NPLOC4-218ENST00000574964 NPHS2Q9NP85 383 aa13.62□□□□□ -0.23
NPLOC4-218ENST00000574964 GIMAP4Q9NUV9 329 aa13.62□□□□□ -0.23
NPLOC4-218ENST00000574964 HEY2Q9UBP5 337 aa13.62□□□□□ -0.23
NPLOC4-218ENST00000574964 ZNF780BQ9Y6R6 833 aa13.62□□□□□ -0.23
NPLOC4-218ENST00000574964 WDFY3Q8IZQ1 3526 aa13.61□□□□□ -0.23
NPLOC4-218ENST00000574964 NSG1A0A0A6YYJ2 146 aa13.61□□□□□ -0.23
NPLOC4-218ENST00000574964 IGHV3-20A0A0C4DH32 117 aa13.61□□□□□ -0.23
NPLOC4-218ENST00000574964 MYOCOSA0A1B0GUC4 107 aa13.61□□□□□ -0.23
NPLOC4-218ENST00000574964 TCRBV16S1A1N1A0A5B0 115 aa13.61□□□□□ -0.23
NPLOC4-218ENST00000574964 ARGFXA6NJG6 315 aa13.61□□□□□ -0.23
NPLOC4-218ENST00000574964 WASHC1A8K0Z3 465 aa13.61□□□□□ -0.23
NPLOC4-218ENST00000574964 SOCS6O14544 535 aa13.61□□□□□ -0.23
NPLOC4-218ENST00000574964 ZNF195O14628 629 aa13.61□□□□□ -0.23
NPLOC4-218ENST00000574964 AKAP10O43572 662 aa13.61□□□□□ -0.23
NPLOC4-218ENST00000574964 FGF17O60258 216 aa13.61□□□□□ -0.23
NPLOC4-218ENST00000574964 OR10H2O60403 315 aa13.61□□□□□ -0.23
NPLOC4-218ENST00000574964 LRATO95237 230 aa13.61□□□□□ -0.23
NPLOC4-218ENST00000574964 FURINP09958 794 aa13.61□□□□□ -0.23
NPLOC4-218ENST00000574964 PRR35P0CG20 571 aa13.61□□□□□ -0.23
NPLOC4-218ENST00000574964 COX7A2P14406 83 aa13.61□□□□□ -0.23
NPLOC4-218ENST00000574964 DDX5P17844 614 aaKnown RBP13.61□□□□□ -0.23
NPLOC4-218ENST00000574964 DDCP20711 480 aa13.61□□□□□ -0.23
NPLOC4-218ENST00000574964 EFNA3P52797 238 aa13.61□□□□□ -0.23
NPLOC4-218ENST00000574964 RRADP55042 308 aa13.61□□□□□ -0.23
NPLOC4-218ENST00000574964 FAM71E1Q6IPT2 247 aa13.61□□□□□ -0.23
NPLOC4-218ENST00000574964 SLC48A1Q6P1K1 146 aa13.61□□□□□ -0.23
NPLOC4-218ENST00000574964 KIRREL2Q6UWL6 708 aa13.61□□□□□ -0.23
NPLOC4-218ENST00000574964 NDUFAF7Q7L592 441 aa13.61□□□□□ -0.23
NPLOC4-218ENST00000574964 MAVSQ7Z434 540 aa13.61□□□□□ -0.23
NPLOC4-218ENST00000574964 SPATA19Q7Z5L4 167 aa13.61□□□□□ -0.23
NPLOC4-218ENST00000574964 MMP21Q8N119 569 aa13.61□□□□□ -0.23
NPLOC4-218ENST00000574964 OR11G2Q8NGC1 345 aa13.61□□□□□ -0.23
NPLOC4-218ENST00000574964 DNAJB14Q8TBM8 379 aa13.61□□□□□ -0.23
NPLOC4-218ENST00000574964 ACTRT2Q8TDY3 377 aa13.61□□□□□ -0.23
NPLOC4-218ENST00000574964 EXOSC8Q96B26 276 aaKnown RBP13.61□□□□□ -0.23
NPLOC4-218ENST00000574964 ANKRD9Q96BM1 317 aaPredicted RBP13.61□□□□□ -0.23
NPLOC4-218ENST00000574964 RBM18Q96H35 190 aaKnown RBP13.61□□□□□ -0.23
NPLOC4-218ENST00000574964 EGLN2Q96KS0 407 aa13.61□□□□□ -0.23
NPLOC4-218ENST00000574964 DGAT2Q96PD7 388 aa13.61□□□□□ -0.23
NPLOC4-218ENST00000574964 SIKE1Q9BRV8 207 aa13.61□□□□□ -0.23
NPLOC4-218ENST00000574964 PELOQ9BRX2 385 aaKnown RBP13.61□□□□□ -0.23
NPLOC4-218ENST00000574964 TCF7L2Q9NQB0 619 aa13.61□□□□□ -0.23
NPLOC4-218ENST00000574964 C5AR2Q9P296 337 aa13.61□□□□□ -0.23
NPLOC4-218ENST00000574964 DCTN4Q9UJW0 460 aa13.61□□□□□ -0.23
NPLOC4-218ENST00000574964 FBXL4Q9UKA2 621 aa13.61□□□□□ -0.23
NPLOC4-218ENST00000574964 UTS2RQ9UKP6 389 aa13.61□□□□□ -0.23
NPLOC4-218ENST00000574964 G3BP2Q9UN86 482 aaKnown RBP13.61□□□□□ -0.23
NPLOC4-218ENST00000574964 ENTPD4Q9Y227 616 aa13.61□□□□□ -0.23
NPLOC4-218ENST00000574964 LOC102723996A0A087X1L8 192 aa13.6□□□□□ -0.23
NPLOC4-218ENST00000574964 IGKV3D-11A0A0A0MRZ8 115 aa13.6□□□□□ -0.23
NPLOC4-218ENST00000574964 A0A0G2JND7 137 aa13.6□□□□□ -0.23
NPLOC4-218ENST00000574964 DYRK3O43781 588 aa13.6□□□□□ -0.23
NPLOC4-218ENST00000574964 G6PDP11413 515 aa13.6□□□□□ -0.23
NPLOC4-218ENST00000574964 ALOX15P16050 662 aaPredicted RBP13.6□□□□□ -0.23
NPLOC4-218ENST00000574964 HPCAL1P37235 193 aa13.6□□□□□ -0.23
NPLOC4-218ENST00000574964 RPL3P39023 403 aaKnown RBP13.6□□□□□ -0.23
NPLOC4-218ENST00000574964 IDH3AP50213 366 aa13.6□□□□□ -0.23
NPLOC4-218ENST00000574964 XKP51811 444 aa13.6□□□□□ -0.23
NPLOC4-218ENST00000574964 GNGT1P63211 74 aa13.6□□□□□ -0.23
NPLOC4-218ENST00000574964 PLIN5Q00G26 463 aa13.6□□□□□ -0.23
NPLOC4-218ENST00000574964 PTGR1Q14914 329 aa13.6□□□□□ -0.23
NPLOC4-218ENST00000574964 C6orf163Q5TEZ5 329 aa13.6□□□□□ -0.23
NPLOC4-218ENST00000574964 OGFOD2Q6N063 350 aa13.6□□□□□ -0.23
NPLOC4-218ENST00000574964 PAPD4Q6PIY7 484 aaKnown RBP13.6□□□□□ -0.23
NPLOC4-218ENST00000574964 C19orf48Q6RUI8 117 aa13.6□□□□□ -0.23
NPLOC4-218ENST00000574964 R3HCC1LQ7Z5L2 792 aaKnown RBP13.6□□□□□ -0.23
NPLOC4-218ENST00000574964 TICAM1Q8IUC6 712 aa13.6□□□□□ -0.23
NPLOC4-218ENST00000574964 TMEM102Q8N9M5 508 aaPredicted RBP13.6□□□□□ -0.23
NPLOC4-218ENST00000574964 CHMP6Q96FZ7 201 aa13.6□□□□□ -0.23
NPLOC4-218ENST00000574964 MAELQ96JY0 434 aaKnown RBP13.6□□□□□ -0.23
NPLOC4-218ENST00000574964 RILPQ96NA2 401 aa13.6□□□□□ -0.23
NPLOC4-218ENST00000574964 OR52B2Q96RD2 323 aa13.6□□□□□ -0.23
NPLOC4-218ENST00000574964 TUBB6Q9BUF5 446 aa13.6□□□□□ -0.23
NPLOC4-218ENST00000574964 DPY30Q9C005 99 aa13.6□□□□□ -0.23
NPLOC4-218ENST00000574964 REEP4Q9H6H4 257 aa13.6□□□□□ -0.23
NPLOC4-218ENST00000574964 ADAP2Q9NPF8 381 aa13.6□□□□□ -0.23
NPLOC4-218ENST00000574964 ASIC5Q9NY37 505 aa13.6□□□□□ -0.23
NPLOC4-218ENST00000574964 EHD3Q9NZN3 535 aa13.6□□□□□ -0.23
NPLOC4-218ENST00000574964 SH3BP4Q9P0V3 963 aa13.6□□□□□ -0.23
NPLOC4-218ENST00000574964 MAPRE3Q9UPY8 281 aa13.6□□□□□ -0.23
NPLOC4-218ENST00000574964 CLCA3PQ9Y6N3 262 aa13.6□□□□□ -0.23
NPLOC4-218ENST00000574964 IGHV1-45A0A0A0MS14 117 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms