RNA–Protein interactions for RNA: ENST00000573126.1

RPAIN-212, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 2,728 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-212ENST00000573126 BSGP35613 385 aa10.66□□□□□ -0.7
RPAIN-212ENST00000573126 DPTQ07507 201 aa10.66□□□□□ -0.7
RPAIN-212ENST00000573126 IRF3Q14653 427 aa10.66□□□□□ -0.7
RPAIN-212ENST00000573126 EIF4HQ15056 248 aaKnown RBP10.66□□□□□ -0.7
RPAIN-212ENST00000573126 UAP1L1Q3KQV9 507 aa10.66□□□□□ -0.7
RPAIN-212ENST00000573126 SAXO2Q658L1 398 aa10.66□□□□□ -0.7
RPAIN-212ENST00000573126 WASH2PQ6VEQ5 465 aa10.66□□□□□ -0.7
RPAIN-212ENST00000573126 BCDIN3DQ7Z5W3 292 aaKnown RBP10.66□□□□□ -0.7
RPAIN-212ENST00000573126 CYP4Z2PQ8N1L4 340 aa10.66□□□□□ -0.7
RPAIN-212ENST00000573126 CELF5Q8N6W0 485 aaKnown RBP10.66□□□□□ -0.7
RPAIN-212ENST00000573126 POC5Q8NA72 575 aa10.66□□□□□ -0.7
RPAIN-212ENST00000573126 MINDY2Q8NBR6 621 aa10.66□□□□□ -0.7
RPAIN-212ENST00000573126 KBTBD8Q8NFY9 601 aa10.66□□□□□ -0.7
RPAIN-212ENST00000573126 SETD7Q8WTS6 366 aaKnown RBP10.66□□□□□ -0.7
RPAIN-212ENST00000573126 TEX10Q9NXF1 929 aaPredicted RBP10.66□□□□□ -0.7
RPAIN-212ENST00000573126 AHSPQ9NZD4 102 aa10.66□□□□□ -0.7
RPAIN-212ENST00000573126 DNAJC27Q9NZQ0 273 aa10.66□□□□□ -0.7
RPAIN-212ENST00000573126 KCND3Q9UK17 655 aa10.66□□□□□ -0.7
RPAIN-212ENST00000573126 LRRK1Q38SD2 2015 aa10.66□□□□□ -0.7
RPAIN-212ENST00000573126 ANHXE9PGG2 379 aa10.66□□□□□ -0.7
RPAIN-212ENST00000573126 AQP9O43315 295 aa10.66□□□□□ -0.7
RPAIN-212ENST00000573126 TMPRSS11DO60235 418 aa10.66□□□□□ -0.7
RPAIN-212ENST00000573126 MFN2O95140 757 aa10.66□□□□□ -0.7
RPAIN-212ENST00000573126 S100A5P33763 92 aa10.66□□□□□ -0.7
RPAIN-212ENST00000573126 OLR1P78380 273 aa10.66□□□□□ -0.7
RPAIN-212ENST00000573126 ZNF234Q14588 700 aa10.66□□□□□ -0.7
RPAIN-212ENST00000573126 AGAP7PQ5VUJ5 663 aa10.66□□□□□ -0.7
RPAIN-212ENST00000573126 C6orf120Q7Z4R8 191 aa10.66□□□□□ -0.7
RPAIN-212ENST00000573126 ADCK2Q7Z695 626 aa10.66□□□□□ -0.7
RPAIN-212ENST00000573126 ETFBKMTQ8IXQ9 262 aa10.66□□□□□ -0.7
RPAIN-212ENST00000573126 PARP16Q8N5Y8 322 aa10.66□□□□□ -0.7
RPAIN-212ENST00000573126 AMER3Q8N944 861 aa10.66□□□□□ -0.7
RPAIN-212ENST00000573126 OR4D11Q8NGI4 311 aa10.66□□□□□ -0.7
RPAIN-212ENST00000573126 OR5D16Q8NGK9 328 aa10.66□□□□□ -0.7
RPAIN-212ENST00000573126 WFIKKN2Q8TEU8 576 aa10.66□□□□□ -0.7
RPAIN-212ENST00000573126 MS4A8Q9BY19 250 aa10.66□□□□□ -0.7
RPAIN-212ENST00000573126 CRISPLD2Q9H0B8 497 aa10.66□□□□□ -0.7
RPAIN-212ENST00000573126 ANKHQ9HCJ1 492 aa10.66□□□□□ -0.7
RPAIN-212ENST00000573126 LHX9Q9NQ69 397 aa10.66□□□□□ -0.7
RPAIN-212ENST00000573126 CLN6Q9NWW5 311 aa10.66□□□□□ -0.7
RPAIN-212ENST00000573126 GIN1Q9NXP7 522 aa10.66□□□□□ -0.7
RPAIN-212ENST00000573126 DEC1Q9P2X7 70 aa10.66□□□□□ -0.7
RPAIN-212ENST00000573126 SLC27A6Q9Y2P4 619 aa10.66□□□□□ -0.7
RPAIN-212ENST00000573126 PCDHGA3Q9Y5H0 932 aa10.66□□□□□ -0.7
RPAIN-212ENST00000573126 NUMA1Q14980 2115 aa10.66□□□□□ -0.7
RPAIN-212ENST00000573126 EDDM13A0A1B0GTR0 161 aa10.65□□□□□ -0.7
RPAIN-212ENST00000573126 HEPACAM2A8MVW5 462 aa10.65□□□□□ -0.7
RPAIN-212ENST00000573126 HMGN4O00479 90 aa10.65□□□□□ -0.7
RPAIN-212ENST00000573126 CAPN5O15484 640 aaPredicted RBP10.65□□□□□ -0.7
RPAIN-212ENST00000573126 HOXC11O43248 304 aaPredicted RBP10.65□□□□□ -0.7
RPAIN-212ENST00000573126 LATO43561 262 aa10.65□□□□□ -0.7
RPAIN-212ENST00000573126 VEGFDO43915 354 aa10.65□□□□□ -0.7
RPAIN-212ENST00000573126 KIAA0513O60268 411 aa10.65□□□□□ -0.7
RPAIN-212ENST00000573126 CKMT1AP12532 417 aa10.65□□□□□ -0.7
RPAIN-212ENST00000573126 P2RY2P41231 377 aa10.65□□□□□ -0.7
RPAIN-212ENST00000573126 HEPACAMQ14CZ8 416 aa10.65□□□□□ -0.7
RPAIN-212ENST00000573126 ERN2Q76MJ5 926 aaKnown RBP10.65□□□□□ -0.7
RPAIN-212ENST00000573126 ZNF765Q7L2R6 523 aa10.65□□□□□ -0.7
RPAIN-212ENST00000573126 LACC1Q8IV20 430 aa10.65□□□□□ -0.7
RPAIN-212ENST00000573126 C12orf76Q8N812 135 aaPredicted RBP10.65□□□□□ -0.7
RPAIN-212ENST00000573126 TMIEQ8NEW7 156 aa10.65□□□□□ -0.7
RPAIN-212ENST00000573126 SPPL3Q8TCT6 385 aa10.65□□□□□ -0.7
RPAIN-212ENST00000573126 CXorf40AQ8TE69 158 aa10.65□□□□□ -0.7
RPAIN-212ENST00000573126 OR5P2Q8WZ92 322 aa10.65□□□□□ -0.7
RPAIN-212ENST00000573126 AIF1LQ9BQI0 150 aa10.65□□□□□ -0.7
RPAIN-212ENST00000573126 SIRT3Q9NTG7 399 aaPredicted RBP10.65□□□□□ -0.7
RPAIN-212ENST00000573126 TMCC3Q9ULS5 477 aa10.65□□□□□ -0.7
RPAIN-212ENST00000573126 REV3LO60673 3130 aa10.65□□□□□ -0.7
RPAIN-212ENST00000573126 EFCAB10A6NFE3 127 aa10.65□□□□□ -0.7
RPAIN-212ENST00000573126 ARHGAP33O14559 1287 aa10.65□□□□□ -0.7
RPAIN-212ENST00000573126 OR1F1O43749 312 aa10.65□□□□□ -0.7
RPAIN-212ENST00000573126 PRKRAO75569 313 aaKnown RBP10.65□□□□□ -0.7
RPAIN-212ENST00000573126 DLGAP3O95886 979 aa10.65□□□□□ -0.7
RPAIN-212ENST00000573126 RB1P06400 928 aa10.65□□□□□ -0.7
RPAIN-212ENST00000573126 ALOX12P18054 663 aa10.65□□□□□ -0.7
RPAIN-212ENST00000573126 ELAVL4P26378 380 aaKnown RBP10.65□□□□□ -0.7
RPAIN-212ENST00000573126 SERPINB1P30740 379 aa10.65□□□□□ -0.7
RPAIN-212ENST00000573126 BMPR1AP36894 532 aa10.65□□□□□ -0.7
RPAIN-212ENST00000573126 SOX3P41225 446 aa10.65□□□□□ -0.7
RPAIN-212ENST00000573126 UGT2B15P54855 530 aa10.65□□□□□ -0.7
RPAIN-212ENST00000573126 TEKQ02763 1124 aa10.65□□□□□ -0.7
RPAIN-212ENST00000573126 SFSWAPQ12872 951 aaKnown RBP10.65□□□□□ -0.7
RPAIN-212ENST00000573126 PIN1Q13526 163 aaPredicted RBP10.65□□□□□ -0.7
RPAIN-212ENST00000573126 SYPL1Q16563 259 aa10.65□□□□□ -0.7
RPAIN-212ENST00000573126 PLAG1Q6DJT9 500 aa10.65□□□□□ -0.7
RPAIN-212ENST00000573126 ZNF367Q7RTV3 350 aa10.65□□□□□ -0.7
RPAIN-212ENST00000573126 COMTD1Q86VU5 262 aa10.65□□□□□ -0.7
RPAIN-212ENST00000573126 FAM20CQ8IXL6 584 aa10.65□□□□□ -0.7
RPAIN-212ENST00000573126 FAM46DQ8NEK8 389 aa10.65□□□□□ -0.7
RPAIN-212ENST00000573126 OR5K2Q8NHB8 316 aa10.65□□□□□ -0.7
RPAIN-212ENST00000573126 CRELD1Q96HD1 420 aa10.65□□□□□ -0.7
RPAIN-212ENST00000573126 PPP1R16AQ96I34 528 aa10.65□□□□□ -0.7
RPAIN-212ENST00000573126 TREX2Q9BQ50 279 aaPredicted RBP10.65□□□□□ -0.7
RPAIN-212ENST00000573126 PSD2Q9BQI7 771 aa10.65□□□□□ -0.7
RPAIN-212ENST00000573126 CDCA4Q9BXL8 241 aa10.65□□□□□ -0.7
RPAIN-212ENST00000573126 UCK2Q9BZX2 261 aa10.65□□□□□ -0.7
RPAIN-212ENST00000573126 KLHL25Q9H0H3 589 aa10.65□□□□□ -0.7
RPAIN-212ENST00000573126 SERHL2Q9H4I8 314 aa10.65□□□□□ -0.7
RPAIN-212ENST00000573126 NEUROD4Q9HD90 331 aa10.65□□□□□ -0.7
RPAIN-212ENST00000573126 SEMA3GQ9NS98 782 aa10.65□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms