RNA–Protein interactions for RNA: ENST00000564582.2

CHD9-210, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 3

Gene CHD9, Length 968 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-210ENST00000564582 MED18Q9BUE0 208 aa5.34□□□□□ -1.55
CHD9-210ENST00000564582 ZNF416Q9BWM5 594 aa5.34□□□□□ -1.55
CHD9-210ENST00000564582 CDCA4Q9BXL8 241 aa5.34□□□□□ -1.55
CHD9-210ENST00000564582 UCK2Q9BZX2 261 aa5.34□□□□□ -1.55
CHD9-210ENST00000564582 ROGDIQ9GZN7 287 aa5.34□□□□□ -1.55
CHD9-210ENST00000564582 PORCNQ9H237 461 aa5.34□□□□□ -1.55
CHD9-210ENST00000564582 TFB2MQ9H5Q4 396 aaKnown RBP5.34□□□□□ -1.55
CHD9-210ENST00000564582 NARFLQ9H6Q4 476 aa5.34□□□□□ -1.55
CHD9-210ENST00000564582 ACTR8Q9H981 624 aa5.34□□□□□ -1.55
CHD9-210ENST00000564582 ERVMER34-1Q9H9K5 563 aa5.34□□□□□ -1.55
CHD9-210ENST00000564582 NTN4Q9HB63 628 aa5.34□□□□□ -1.55
CHD9-210ENST00000564582 APOBEC3GQ9HC16 384 aaKnown RBP5.34□□□□□ -1.55
CHD9-210ENST00000564582 IFT46Q9NQC8 304 aa5.34□□□□□ -1.55
CHD9-210ENST00000564582 NRBP2Q9NSY0 501 aa5.34□□□□□ -1.55
CHD9-210ENST00000564582 TRMT13Q9NUP7 481 aaKnown RBP5.34□□□□□ -1.55
CHD9-210ENST00000564582 DCAF13Q9NV06 445 aaKnown RBP5.34□□□□□ -1.55
CHD9-210ENST00000564582 SETD4Q9NVD3 440 aa5.34□□□□□ -1.55
CHD9-210ENST00000564582 AIG1Q9NVV5 245 aa5.34□□□□□ -1.55
CHD9-210ENST00000564582 ADPRHL2Q9NX46 363 aa5.34□□□□□ -1.55
CHD9-210ENST00000564582 TFCP2L1Q9NZI6 479 aa5.34□□□□□ -1.55
CHD9-210ENST00000564582 KLHL8Q9P2G9 620 aaPredicted RBP5.34□□□□□ -1.55
CHD9-210ENST00000564582 ERVK-18Q9QC07 812 aa5.34□□□□□ -1.55
CHD9-210ENST00000564582 MED16Q9Y2X0 877 aa5.34□□□□□ -1.55
CHD9-210ENST00000564582 PRELID3BQ9Y3B1 194 aa5.34□□□□□ -1.55
CHD9-210ENST00000564582 U3KQ87 197 aa5.34□□□□□ -1.55
CHD9-210ENST00000564582 RGPD3A6NKT7 1758 aaPredicted RBP5.34□□□□□ -1.56
CHD9-210ENST00000564582 RGPD4Q7Z3J3 1758 aa5.34□□□□□ -1.56
CHD9-210ENST00000564582 PQLC2LA1A4F0 135 aa5.33□□□□□ -1.56
CHD9-210ENST00000564582 ANKDD1BA6NHY2 528 aa5.33□□□□□ -1.56
CHD9-210ENST00000564582 E5RI56 91 aa5.33□□□□□ -1.56
CHD9-210ENST00000564582 ATP6V1G2-DDX39BF2Z307 99 aa5.33□□□□□ -1.56
CHD9-210ENST00000564582 TRIM77I1YAP6 450 aa5.33□□□□□ -1.56
CHD9-210ENST00000564582 I3L521 148 aa5.33□□□□□ -1.56
CHD9-210ENST00000564582 FXYD1O00168 92 aa5.33□□□□□ -1.56
CHD9-210ENST00000564582 UPK1AO00322 258 aa5.33□□□□□ -1.56
CHD9-210ENST00000564582 ANKRD28O15084 1053 aa5.33□□□□□ -1.56
CHD9-210ENST00000564582 YY2O15391 372 aa5.33□□□□□ -1.56
CHD9-210ENST00000564582 RGS5O15539 181 aa5.33□□□□□ -1.56
CHD9-210ENST00000564582 PI15O43692 258 aa5.33□□□□□ -1.56
CHD9-210ENST00000564582 GMDSO60547 372 aa5.33□□□□□ -1.56
CHD9-210ENST00000564582 KCNJ13O60928 360 aa5.33□□□□□ -1.56
CHD9-210ENST00000564582 PSIP1O75475 530 aaKnown RBP5.33□□□□□ -1.56
CHD9-210ENST00000564582 GOT2P00505 430 aaKnown RBP5.33□□□□□ -1.56
CHD9-210ENST00000564582 LALBAP00709 142 aa5.33□□□□□ -1.56
CHD9-210ENST00000564582 SERPINA1P01009 418 aa5.33□□□□□ -1.56
CHD9-210ENST00000564582 ICAM1P05362 532 aa5.33□□□□□ -1.56
CHD9-210ENST00000564582 CDK1P06493 297 aa5.33□□□□□ -1.56
CHD9-210ENST00000564582 TPOP07202 933 aa5.33□□□□□ -1.56
CHD9-210ENST00000564582 GRPP07492 148 aa5.33□□□□□ -1.56
CHD9-210ENST00000564582 ATXN1LP0C7T5 689 aaKnown RBP5.33□□□□□ -1.56
CHD9-210ENST00000564582 PRR35P0CG20 571 aa5.33□□□□□ -1.56
CHD9-210ENST00000564582 ARP10275 920 aa5.33□□□□□ -1.56
CHD9-210ENST00000564582 CYP2B6P20813 491 aa5.33□□□□□ -1.56
CHD9-210ENST00000564582 GATA3P23771 443 aa5.33□□□□□ -1.56
CHD9-210ENST00000564582 CHMP24386 653 aa5.33□□□□□ -1.56
CHD9-210ENST00000564582 EPHX2P34913 555 aa5.33□□□□□ -1.56
CHD9-210ENST00000564582 DCTP40126 519 aa5.33□□□□□ -1.56
CHD9-210ENST00000564582 FOLR3P41439 243 aa5.33□□□□□ -1.56
CHD9-210ENST00000564582 NRIP1P48552 1158 aa5.33□□□□□ -1.56
CHD9-210ENST00000564582 RGS6P49758 472 aa5.33□□□□□ -1.56
CHD9-210ENST00000564582 NKX2-5P52952 324 aaPredicted RBP5.33□□□□□ -1.56
CHD9-210ENST00000564582 ATXN3P54252 364 aaPredicted RBP5.33□□□□□ -1.56
CHD9-210ENST00000564582 NXPH1P58417 271 aa5.33□□□□□ -1.56
CHD9-210ENST00000564582 RRAS2P62070 204 aaPredicted RBP5.33□□□□□ -1.56
CHD9-210ENST00000564582 NCS1P62166 190 aa5.33□□□□□ -1.56
CHD9-210ENST00000564582 PPP3R1P63098 170 aa5.33□□□□□ -1.56
CHD9-210ENST00000564582 RHAGQ02094 409 aa5.33□□□□□ -1.56
CHD9-210ENST00000564582 SPP2Q13103 211 aa5.33□□□□□ -1.56
CHD9-210ENST00000564582 SNTA1Q13424 505 aa5.33□□□□□ -1.56
CHD9-210ENST00000564582 GRM3Q14832 879 aa5.33□□□□□ -1.56
CHD9-210ENST00000564582 MAD2L1BPQ15013 274 aaPredicted RBP5.33□□□□□ -1.56
CHD9-210ENST00000564582 PFKFB4Q16877 469 aa5.33□□□□□ -1.56
CHD9-210ENST00000564582 MICAQ29983 383 aa5.33□□□□□ -1.56
CHD9-210ENST00000564582 VPS26BQ4G0F5 336 aa5.33□□□□□ -1.56
CHD9-210ENST00000564582 BCL7AQ4VC05 210 aa5.33□□□□□ -1.56
CHD9-210ENST00000564582 ATP6AP1LQ52LC2 224 aa5.33□□□□□ -1.56
CHD9-210ENST00000564582 TECRLQ5HYJ1 363 aa5.33□□□□□ -1.56
CHD9-210ENST00000564582 ZNF678Q5SXM1 525 aa5.33□□□□□ -1.56
CHD9-210ENST00000564582 TRIQKQ629K1 86 aa5.33□□□□□ -1.56
CHD9-210ENST00000564582 KDM4DQ6B0I6 523 aa5.33□□□□□ -1.56
CHD9-210ENST00000564582 SFRP4Q6FHJ7 346 aaPredicted RBP5.33□□□□□ -1.56
CHD9-210ENST00000564582 CES5AQ6NT32 575 aa5.33□□□□□ -1.56
CHD9-210ENST00000564582 SLC39A4Q6P5W5 647 aa5.33□□□□□ -1.56
CHD9-210ENST00000564582 ZNF549Q6P9A3 640 aa5.33□□□□□ -1.56
CHD9-210ENST00000564582 VWA1Q6PCB0 445 aa5.33□□□□□ -1.56
CHD9-210ENST00000564582 ZNF783Q6ZMS7 281 aa5.33□□□□□ -1.56
CHD9-210ENST00000564582 NRARPQ7Z6K4 114 aa5.33□□□□□ -1.56
CHD9-210ENST00000564582 MRPL10Q7Z7H8 261 aaKnown RBP5.33□□□□□ -1.56
CHD9-210ENST00000564582 CCDC36Q8IYA8 594 aa5.33□□□□□ -1.56
CHD9-210ENST00000564582 TTC29Q8NA56 475 aaPredicted RBP5.33□□□□□ -1.56
CHD9-210ENST00000564582 TTLQ8NG68 377 aa5.33□□□□□ -1.56
CHD9-210ENST00000564582 STAG3L4Q8TBR4 150 aa5.33□□□□□ -1.56
CHD9-210ENST00000564582 FANK1Q8TC84 345 aa5.33□□□□□ -1.56
CHD9-210ENST00000564582 SLC13A3Q8WWT9 602 aa5.33□□□□□ -1.56
CHD9-210ENST00000564582 ACOT12Q8WYK0 555 aa5.33□□□□□ -1.56
CHD9-210ENST00000564582 ELMO1Q92556 727 aa5.33□□□□□ -1.56
CHD9-210ENST00000564582 FAM162AQ96A26 154 aa5.33□□□□□ -1.56
CHD9-210ENST00000564582 NTAN1Q96AB6 310 aa5.33□□□□□ -1.56
CHD9-210ENST00000564582 TESCQ96BS2 214 aa5.33□□□□□ -1.56
CHD9-210ENST00000564582 C11orf24Q96F05 449 aaPredicted RBP5.33□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms