RNA–Protein interactions for RNA: ENST00000558544.5

TPM1-214, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 1,399 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-214ENST00000558544 VPS50Q96JG6 964 aa16.36■□□□□ 0.21
TPM1-214ENST00000558544 FAIM2Q9BWQ8 316 aa16.36■□□□□ 0.21
TPM1-214ENST00000558544 ZNF700Q9H0M5 742 aa16.36■□□□□ 0.21
TPM1-214ENST00000558544 A0A1W2PQ72 361 aa16.35■□□□□ 0.21
TPM1-214ENST00000558544 TRPC5OSA6NMA1 111 aa16.35■□□□□ 0.21
TPM1-214ENST00000558544 A8MUA0 341 aa16.35■□□□□ 0.21
TPM1-214ENST00000558544 PRR35P0CG20 571 aa16.35■□□□□ 0.21
TPM1-214ENST00000558544 MAPK1P28482 360 aa16.35■□□□□ 0.21
TPM1-214ENST00000558544 EPHA3P29320 983 aa16.35■□□□□ 0.21
TPM1-214ENST00000558544 GSTM5P46439 218 aa16.35■□□□□ 0.21
TPM1-214ENST00000558544 NDUFAF7Q7L592 441 aa16.35■□□□□ 0.21
TPM1-214ENST00000558544 TMEM132CQ8N3T6 1108 aa16.35■□□□□ 0.21
TPM1-214ENST00000558544 AMER2Q8N7J2 671 aa16.35■□□□□ 0.21
TPM1-214ENST00000558544 CLHC1Q8NHS4 586 aa16.35■□□□□ 0.21
TPM1-214ENST00000558544 EGLN2Q96KS0 407 aa16.35■□□□□ 0.21
TPM1-214ENST00000558544 TSSK3Q96PN8 268 aa16.35■□□□□ 0.21
TPM1-214ENST00000558544 WDR77Q9BQA1 342 aaPredicted RBP16.35■□□□□ 0.21
TPM1-214ENST00000558544 ALOXE3Q9BYJ1 711 aa16.35■□□□□ 0.21
TPM1-214ENST00000558544 WDR55Q9H6Y2 383 aaPredicted RBP16.35■□□□□ 0.21
TPM1-214ENST00000558544 ZNF160Q9HCG1 818 aa16.35■□□□□ 0.21
TPM1-214ENST00000558544 MYNNQ9NPC7 610 aa16.35■□□□□ 0.21
TPM1-214ENST00000558544 PNO1Q9NRX1 252 aaKnown RBP16.35■□□□□ 0.21
TPM1-214ENST00000558544 KCNMB2Q9Y691 235 aa16.35■□□□□ 0.21
TPM1-214ENST00000558544 USH1CQ9Y6N9 552 aa16.35■□□□□ 0.21
TPM1-214ENST00000558544 NSG1A0A0A6YYJ2 146 aa16.34■□□□□ 0.21
TPM1-214ENST00000558544 GOLGA8QA0A0J9YX86 632 aa16.34■□□□□ 0.21
TPM1-214ENST00000558544 GOLGA8OA6NCC3 632 aa16.34■□□□□ 0.21
TPM1-214ENST00000558544 GOLGA8NF8WBI6 632 aa16.34■□□□□ 0.21
TPM1-214ENST00000558544 ZNF195O14628 629 aa16.34■□□□□ 0.21
TPM1-214ENST00000558544 HPP00738 406 aa16.34■□□□□ 0.21
TPM1-214ENST00000558544 BCKDHAP12694 445 aa16.34■□□□□ 0.21
TPM1-214ENST00000558544 MDH1P40925 334 aaKnown RBP16.34■□□□□ 0.21
TPM1-214ENST00000558544 IGLV3-21P80748 117 aaPredicted RBP16.34■□□□□ 0.21
TPM1-214ENST00000558544 CBX1P83916 185 aa16.34■□□□□ 0.21
TPM1-214ENST00000558544 ACTN3Q08043 901 aaPredicted RBP16.34■□□□□ 0.21
TPM1-214ENST00000558544 C2orf80Q0P641 193 aa16.34■□□□□ 0.21
TPM1-214ENST00000558544 HEPACAMQ14CZ8 416 aa16.34■□□□□ 0.21
TPM1-214ENST00000558544 TBR1Q16650 682 aa16.34■□□□□ 0.21
TPM1-214ENST00000558544 SLC9B1Q4ZJI4 515 aa16.34■□□□□ 0.21
TPM1-214ENST00000558544 DCAF10Q5QP82 559 aa16.34■□□□□ 0.21
TPM1-214ENST00000558544 IL23RQ5VWK5 629 aa16.34■□□□□ 0.21
TPM1-214ENST00000558544 FAM71E1Q6IPT2 247 aa16.34■□□□□ 0.21
TPM1-214ENST00000558544 SLC48A1Q6P1K1 146 aa16.34■□□□□ 0.21
TPM1-214ENST00000558544 PAPD4Q6PIY7 484 aaKnown RBP16.34■□□□□ 0.21
TPM1-214ENST00000558544 LIX1Q8N485 282 aa16.34■□□□□ 0.21
TPM1-214ENST00000558544 TMEM102Q8N9M5 508 aaPredicted RBP16.34■□□□□ 0.21
TPM1-214ENST00000558544 PUM2Q8TB72 1066 aaKnown RBP eCLIP16.34■□□□□ 0.211e-6■□□□□ 10.4
TPM1-214ENST00000558544 EXTL1Q92935 676 aa16.34■□□□□ 0.21
TPM1-214ENST00000558544 GFM2Q969S9 779 aaKnown RBP16.34■□□□□ 0.21
TPM1-214ENST00000558544 FER1L6-AS2Q96M78 137 aa16.34■□□□□ 0.21
TPM1-214ENST00000558544 TRIM55Q9BYV6 548 aa16.34■□□□□ 0.21
TPM1-214ENST00000558544 BAIAP2L1Q9UHR4 511 aa16.34■□□□□ 0.21
TPM1-214ENST00000558544 CES1P1Q9UKY3 287 aa16.34■□□□□ 0.21
TPM1-214ENST00000558544 KMT2BQ9UMN6 2715 aaPredicted RBP16.33■□□□□ 0.2
TPM1-214ENST00000558544 TNRC6AQ8NDV7 1962 aaKnown RBP16.33■□□□□ 0.2
TPM1-214ENST00000558544 A0A1W2PS29 197 aa16.33■□□□□ 0.2
TPM1-214ENST00000558544 EDF1O60869 148 aaKnown RBP16.33■□□□□ 0.2
TPM1-214ENST00000558544 VPS4BO75351 444 aa16.33■□□□□ 0.2
TPM1-214ENST00000558544 DNAJB5O75953 348 aa16.33■□□□□ 0.2
TPM1-214ENST00000558544 LRATO95237 230 aa16.33■□□□□ 0.2
TPM1-214ENST00000558544 GPR75O95800 540 aa16.33■□□□□ 0.2
TPM1-214ENST00000558544 IFNA16P05015 189 aa16.33■□□□□ 0.2
TPM1-214ENST00000558544 DRD2P14416 443 aa16.33■□□□□ 0.2
TPM1-214ENST00000558544 PIK3R1P27986 724 aa16.33■□□□□ 0.2
TPM1-214ENST00000558544 RRADP55042 308 aa16.33■□□□□ 0.2
TPM1-214ENST00000558544 ERVK-8P63133 956 aa16.33■□□□□ 0.2
TPM1-214ENST00000558544 EMX2Q04743 252 aa16.33■□□□□ 0.2
TPM1-214ENST00000558544 MAD2L1Q13257 205 aaPredicted RBP16.33■□□□□ 0.2
TPM1-214ENST00000558544 SERTAD2Q14140 314 aa16.33■□□□□ 0.2
TPM1-214ENST00000558544 FAM180BQ6P0A1 224 aa16.33■□□□□ 0.2
TPM1-214ENST00000558544 BORAQ6PGQ7 559 aa16.33■□□□□ 0.2
TPM1-214ENST00000558544 LARP4Q71RC2 724 aaKnown RBP eCLIP16.33■□□□□ 0.29e-10■□□□□ 8.2
TPM1-214ENST00000558544 CLEC1AQ8NC01 280 aa16.33■□□□□ 0.2
TPM1-214ENST00000558544 KLHL29Q96CT2 875 aa16.33■□□□□ 0.2
TPM1-214ENST00000558544 LPAR4Q99677 370 aa16.33■□□□□ 0.2
TPM1-214ENST00000558544 TUBB6Q9BUF5 446 aa16.33■□□□□ 0.2
TPM1-214ENST00000558544 ING2Q9H160 280 aa16.33■□□□□ 0.2
TPM1-214ENST00000558544 EIF3LQ9Y262 564 aaKnown RBP16.33■□□□□ 0.2
TPM1-214ENST00000558544 SYNDIG1LA6NDD5 238 aa16.32■□□□□ 0.2
TPM1-214ENST00000558544 AKAP10O43572 662 aa16.32■□□□□ 0.2
TPM1-214ENST00000558544 DIAPH2O60879 1101 aa16.32■□□□□ 0.2
TPM1-214ENST00000558544 ERAL1O75616 437 aaKnown RBP16.32■□□□□ 0.2
TPM1-214ENST00000558544 CELA2AP08217 269 aa16.32■□□□□ 0.2
TPM1-214ENST00000558544 LBPP18428 481 aa16.32■□□□□ 0.2
TPM1-214ENST00000558544 DDCP20711 480 aa16.32■□□□□ 0.2
TPM1-214ENST00000558544 PTGR1Q14914 329 aa16.32■□□□□ 0.2
TPM1-214ENST00000558544 SMU1Q2TAY7 513 aa16.32■□□□□ 0.2
TPM1-214ENST00000558544 ZNF750Q32MQ0 723 aa16.32■□□□□ 0.2
TPM1-214ENST00000558544 NXNQ6DKJ4 435 aa16.32■□□□□ 0.2
TPM1-214ENST00000558544 IKBIPQ70UQ0 350 aa16.32■□□□□ 0.2
TPM1-214ENST00000558544 PARP9Q8IXQ6 854 aa16.32■□□□□ 0.2
TPM1-214ENST00000558544 OR4K14Q8NGD5 310 aa16.32■□□□□ 0.2
TPM1-214ENST00000558544 APOBEC4Q8WW27 367 aaKnown RBP16.32■□□□□ 0.2
TPM1-214ENST00000558544 EXOSC8Q96B26 276 aaKnown RBP16.32■□□□□ 0.2
TPM1-214ENST00000558544 THOC1Q96FV9 657 aaKnown RBP16.32■□□□□ 0.2
TPM1-214ENST00000558544 DGAT2Q96PD7 388 aa16.32■□□□□ 0.2
TPM1-214ENST00000558544 ADAP2Q9NPF8 381 aa16.32■□□□□ 0.2
TPM1-214ENST00000558544 MIEF1Q9NQG6 463 aa16.32■□□□□ 0.2
TPM1-214ENST00000558544 NOP53Q9NZM5 478 aaKnown RBP16.32■□□□□ 0.2
TPM1-214ENST00000558544 UTS2RQ9UKP6 389 aa16.32■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms