RNA–Protein interactions for RNA: ENST00000555943.1

SUPT16H-204, Transcript of SPT16 homolog, facilitates chromatin remodeling subunit, humanhuman

TSL 2 BASIC

Gene SUPT16H, Length 915 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT16H-204ENST00000555943 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP7.24□□□□□ -1.25
SUPT16H-204ENST00000555943 LAS2Q8IYD9 372 aa7.24□□□□□ -1.25
SUPT16H-204ENST00000555943 D2HGDHQ8N465 521 aa7.24□□□□□ -1.25
SUPT16H-204ENST00000555943 DNAJC22Q8N4W6 341 aa7.24□□□□□ -1.25
SUPT16H-204ENST00000555943 DTX3Q8N9I9 347 aa7.24□□□□□ -1.25
SUPT16H-204ENST00000555943 TTC29Q8NA56 475 aaPredicted RBP7.24□□□□□ -1.25
SUPT16H-204ENST00000555943 ZNF740Q8NDX6 193 aa7.24□□□□□ -1.25
SUPT16H-204ENST00000555943 TRPV3Q8NET8 790 aa7.24□□□□□ -1.25
SUPT16H-204ENST00000555943 OR7G3Q8NG95 312 aa7.24□□□□□ -1.25
SUPT16H-204ENST00000555943 TWIST2Q8WVJ9 160 aa7.24□□□□□ -1.25
SUPT16H-204ENST00000555943 CMTM7Q96FZ5 175 aa7.24□□□□□ -1.25
SUPT16H-204ENST00000555943 CHMP6Q96FZ7 201 aa7.24□□□□□ -1.25
SUPT16H-204ENST00000555943 SLC41A2Q96JW4 573 aa7.24□□□□□ -1.25
SUPT16H-204ENST00000555943 ZNF578Q96N58 590 aaPredicted RBP7.24□□□□□ -1.25
SUPT16H-204ENST00000555943 SORT1Q99523 831 aa7.24□□□□□ -1.25
SUPT16H-204ENST00000555943 MTERF1Q99551 399 aaKnown RBP7.24□□□□□ -1.25
SUPT16H-204ENST00000555943 CCT7Q99832 543 aa7.24□□□□□ -1.25
SUPT16H-204ENST00000555943 SLC7A5P2Q9GIP4 190 aa7.24□□□□□ -1.25
SUPT16H-204ENST00000555943 C20orf27Q9GZN8 174 aa7.24□□□□□ -1.25
SUPT16H-204ENST00000555943 NSRP1Q9H0G5 558 aaKnown RBP7.24□□□□□ -1.25
SUPT16H-204ENST00000555943 SPNS1Q9H2V7 528 aa7.24□□□□□ -1.25
SUPT16H-204ENST00000555943 CCDC134Q9H6E4 229 aa7.24□□□□□ -1.25
SUPT16H-204ENST00000555943 FAM60AQ9NP50 221 aa7.24□□□□□ -1.25
SUPT16H-204ENST00000555943 SLCO1B3Q9NPD5 702 aa7.24□□□□□ -1.25
SUPT16H-204ENST00000555943 PNPOQ9NVS9 261 aa7.24□□□□□ -1.25
SUPT16H-204ENST00000555943 NMRK1Q9NWW6 199 aa7.24□□□□□ -1.25
SUPT16H-204ENST00000555943 AHSPQ9NZD4 102 aa7.24□□□□□ -1.25
SUPT16H-204ENST00000555943 MARCOQ9UEW3 520 aaPredicted RBP7.24□□□□□ -1.25
SUPT16H-204ENST00000555943 ZFP69BQ9UJL9 534 aa7.24□□□□□ -1.25
SUPT16H-204ENST00000555943 ZNF225Q9UK10 706 aa7.24□□□□□ -1.25
SUPT16H-204ENST00000555943 ADAM21Q9UKJ8 722 aa7.24□□□□□ -1.25
SUPT16H-204ENST00000555943 RARRES3Q9UL19 164 aa7.24□□□□□ -1.25
SUPT16H-204ENST00000555943 ZNF490Q9ULM2 529 aaPredicted RBP7.24□□□□□ -1.25
SUPT16H-204ENST00000555943 AP1M2Q9Y6Q5 423 aa7.24□□□□□ -1.25
SUPT16H-204ENST00000555943 ARHGEF17Q96PE2 2063 aaPredicted RBP7.24□□□□□ -1.25
SUPT16H-204ENST00000555943 KCNE1BA0A087WTH5 132 aa7.23□□□□□ -1.25
SUPT16H-204ENST00000555943 LOC105369274A0A096LPK9 316 aa7.23□□□□□ -1.25
SUPT16H-204ENST00000555943 LOC102723532A0A0G2JNH3 316 aa7.23□□□□□ -1.25
SUPT16H-204ENST00000555943 GMNCA6NCL1 334 aa7.23□□□□□ -1.25
SUPT16H-204ENST00000555943 TMEM233B4DJY2 109 aa7.23□□□□□ -1.25
SUPT16H-204ENST00000555943 H0YGG7 62 aa7.23□□□□□ -1.25
SUPT16H-204ENST00000555943 FOXE1O00358 373 aaPredicted RBP7.23□□□□□ -1.25
SUPT16H-204ENST00000555943 HDAC3O15379 428 aa7.23□□□□□ -1.25
SUPT16H-204ENST00000555943 ZSCAN9O15535 394 aaPredicted RBP7.23□□□□□ -1.25
SUPT16H-204ENST00000555943 NDUFS4O43181 175 aa7.23□□□□□ -1.25
SUPT16H-204ENST00000555943 RGS14O43566 566 aa7.23□□□□□ -1.25
SUPT16H-204ENST00000555943 NRP2O60462 931 aa7.23□□□□□ -1.25
SUPT16H-204ENST00000555943 EDF1O60869 148 aaKnown RBP7.23□□□□□ -1.25
SUPT16H-204ENST00000555943 CTSVO60911 334 aa7.23□□□□□ -1.25
SUPT16H-204ENST00000555943 SKAP2O75563 359 aaPredicted RBP7.23□□□□□ -1.25
SUPT16H-204ENST00000555943 OR2B3O76000 313 aa7.23□□□□□ -1.25
SUPT16H-204ENST00000555943 PDYNP01213 254 aa7.23□□□□□ -1.25
SUPT16H-204ENST00000555943 LINC00032P0C843 101 aa7.23□□□□□ -1.25
SUPT16H-204ENST00000555943 HSD3B1P14060 373 aa7.23□□□□□ -1.25
SUPT16H-204ENST00000555943 FOLR1P15328 257 aa7.23□□□□□ -1.25
SUPT16H-204ENST00000555943 ARRB2P32121 409 aa7.23□□□□□ -1.25
SUPT16H-204ENST00000555943 RAP1GDS1P52306 607 aa7.23□□□□□ -1.25
SUPT16H-204ENST00000555943 UCNP55089 124 aa7.23□□□□□ -1.25
SUPT16H-204ENST00000555943 FOXA1P55317 472 aa7.23□□□□□ -1.25
SUPT16H-204ENST00000555943 ARF3P61204 181 aaPredicted RBP7.23□□□□□ -1.25
SUPT16H-204ENST00000555943 STXBP1P61764 594 aaKnown RBP7.23□□□□□ -1.25
SUPT16H-204ENST00000555943 RPS13P62277 151 aaKnown RBP7.23□□□□□ -1.25
SUPT16H-204ENST00000555943 EIF3IQ13347 325 aaKnown RBP7.23□□□□□ -1.25
SUPT16H-204ENST00000555943 TUBB3Q13509 450 aa7.23□□□□□ -1.25
SUPT16H-204ENST00000555943 E2F2Q14209 437 aa7.23□□□□□ -1.25
SUPT16H-204ENST00000555943 KCNAB1Q14722 419 aa7.23□□□□□ -1.25
SUPT16H-204ENST00000555943 GRM7Q14831 915 aa7.23□□□□□ -1.25
SUPT16H-204ENST00000555943 ABRAXAS2Q15018 415 aa7.23□□□□□ -1.25
SUPT16H-204ENST00000555943 PDCD2Q16342 344 aaPredicted RBP7.23□□□□□ -1.25
SUPT16H-204ENST00000555943 NDUFA9Q16795 377 aa7.23□□□□□ -1.25
SUPT16H-204ENST00000555943 TBC1D25Q3MII6 688 aa7.23□□□□□ -1.25
SUPT16H-204ENST00000555943 SPDYAQ5MJ70 313 aa7.23□□□□□ -1.25
SUPT16H-204ENST00000555943 WASHC2DQ5SRD0 308 aa7.23□□□□□ -1.25
SUPT16H-204ENST00000555943 MANEAQ5SRI9 462 aa7.23□□□□□ -1.25
SUPT16H-204ENST00000555943 FRMPD2BQ6IN97 320 aa7.23□□□□□ -1.25
SUPT16H-204ENST00000555943 TLDC1Q6P9B6 456 aa7.23□□□□□ -1.25
SUPT16H-204ENST00000555943 SCIMPQ6UWF3 145 aa7.23□□□□□ -1.25
SUPT16H-204ENST00000555943 RNF44Q7L0R7 432 aa7.23□□□□□ -1.25
SUPT16H-204ENST00000555943 ABHD13Q7L211 337 aa7.23□□□□□ -1.25
SUPT16H-204ENST00000555943 LRRC34Q8IZ02 419 aa7.23□□□□□ -1.25
SUPT16H-204ENST00000555943 OR4N4Q8N0Y3 316 aa7.23□□□□□ -1.25
SUPT16H-204ENST00000555943 CSNK1A1LQ8N752 337 aa7.23□□□□□ -1.25
SUPT16H-204ENST00000555943 GBP7Q8N8V2 638 aaPredicted RBP7.23□□□□□ -1.25
SUPT16H-204ENST00000555943 ANKRD53Q8N9V6 530 aa7.23□□□□□ -1.25
SUPT16H-204ENST00000555943 ZNF248Q8NDW4 579 aa7.23□□□□□ -1.25
SUPT16H-204ENST00000555943 SRFBP1Q8NEF9 429 aaKnown RBP7.23□□□□□ -1.25
SUPT16H-204ENST00000555943 HUS1BQ8NHY5 278 aa7.23□□□□□ -1.25
SUPT16H-204ENST00000555943 WDR20Q8TBZ3 569 aa7.23□□□□□ -1.25
SUPT16H-204ENST00000555943 PPP1R36Q96LQ0 422 aa7.23□□□□□ -1.25
SUPT16H-204ENST00000555943 BBC3Q96PG8 261 aaPredicted RBP7.23□□□□□ -1.25
SUPT16H-204ENST00000555943 FCRL4Q96PJ5 515 aa7.23□□□□□ -1.25
SUPT16H-204ENST00000555943 OR2A5Q96R48 311 aa7.23□□□□□ -1.25
SUPT16H-204ENST00000555943 OR6C1Q96RD1 312 aa7.23□□□□□ -1.25
SUPT16H-204ENST00000555943 SERPINI1Q99574 410 aa7.23□□□□□ -1.25
SUPT16H-204ENST00000555943 SARGQ9BW04 601 aa7.23□□□□□ -1.25
SUPT16H-204ENST00000555943 NUF2Q9BZD4 464 aa7.23□□□□□ -1.25
SUPT16H-204ENST00000555943 ASPSCR1Q9BZE9 553 aa7.23□□□□□ -1.25
SUPT16H-204ENST00000555943 RHBGQ9H310 441 aa7.23□□□□□ -1.25
SUPT16H-204ENST00000555943 BRF2Q9HAW0 419 aa7.23□□□□□ -1.25
SUPT16H-204ENST00000555943 DLL4Q9NR61 685 aa7.23□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms