RNA–Protein interactions for RNA: ENST00000555616.5

ACTN1-215, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 919 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-215ENST00000555616 AKTIPQ9H8T0 292 aa9.06□□□□□ -0.96
ACTN1-215ENST00000555616 LRTM1Q9HBL6 345 aa9.06□□□□□ -0.96
ACTN1-215ENST00000555616 C1orf109Q9NX04 203 aa9.06□□□□□ -0.96
ACTN1-215ENST00000555616 AHSPQ9NZD4 102 aa9.06□□□□□ -0.96
ACTN1-215ENST00000555616 B3GNT3Q9Y2A9 372 aa9.06□□□□□ -0.96
ACTN1-215ENST00000555616 TMED5Q9Y3A6 229 aa9.06□□□□□ -0.96
ACTN1-215ENST00000555616 NAALAD2Q9Y3Q0 740 aa9.06□□□□□ -0.96
ACTN1-215ENST00000555616 TNRC6AQ8NDV7 1962 aaKnown RBP9.05□□□□□ -0.96
ACTN1-215ENST00000555616 CLEC18AA5D8T8 446 aa9.05□□□□□ -0.96
ACTN1-215ENST00000555616 URADA6NGE7 173 aa9.05□□□□□ -0.96
ACTN1-215ENST00000555616 ZNF860A6NHJ4 632 aa9.05□□□□□ -0.96
ACTN1-215ENST00000555616 E9PBE3 544 aa9.05□□□□□ -0.96
ACTN1-215ENST00000555616 NPIPB8E9PQR5 432 aa9.05□□□□□ -0.96
ACTN1-215ENST00000555616 LSM1O15116 133 aaKnown RBP9.05□□□□□ -0.96
ACTN1-215ENST00000555616 UBDO15205 165 aa9.05□□□□□ -0.96
ACTN1-215ENST00000555616 PEX11AO75192 247 aa9.05□□□□□ -0.96
ACTN1-215ENST00000555616 SEC22BO75396 215 aa9.05□□□□□ -0.96
ACTN1-215ENST00000555616 TGFB1P01137 390 aa9.05□□□□□ -0.96
ACTN1-215ENST00000555616 PRR35P0CG20 571 aa9.05□□□□□ -0.96
ACTN1-215ENST00000555616 ZNF888P0CJ79 500 aaPredicted RBP9.05□□□□□ -0.96
ACTN1-215ENST00000555616 C8orf89P0DMQ9 161 aa9.05□□□□□ -0.96
ACTN1-215ENST00000555616 PCSK2P16519 638 aa9.05□□□□□ -0.96
ACTN1-215ENST00000555616 IL10P22301 178 aa9.05□□□□□ -0.96
ACTN1-215ENST00000555616 SOX11P35716 441 aa9.05□□□□□ -0.96
ACTN1-215ENST00000555616 STX1BP61266 288 aa9.05□□□□□ -0.96
ACTN1-215ENST00000555616 ERVK-8P63133 956 aa9.05□□□□□ -0.96
ACTN1-215ENST00000555616 HMGCS1Q01581 520 aa9.05□□□□□ -0.96
ACTN1-215ENST00000555616 ACSM2AQ08AH3 577 aa9.05□□□□□ -0.96
ACTN1-215ENST00000555616 HYAL2Q12891 473 aa9.05□□□□□ -0.96
ACTN1-215ENST00000555616 MFAP5Q13361 173 aa9.05□□□□□ -0.96
ACTN1-215ENST00000555616 PCOLCEQ15113 449 aa9.05□□□□□ -0.96
ACTN1-215ENST00000555616 INPP5JQ15735 1006 aaPredicted RBP9.05□□□□□ -0.96
ACTN1-215ENST00000555616 LSM12Q3MHD2 195 aaKnown RBP9.05□□□□□ -0.96
ACTN1-215ENST00000555616 MINDY4Q4G0A6 757 aa9.05□□□□□ -0.96
ACTN1-215ENST00000555616 DEFB134Q4QY38 66 aa9.05□□□□□ -0.96
ACTN1-215ENST00000555616 PRR30Q53SZ7 412 aaPredicted RBP9.05□□□□□ -0.96
ACTN1-215ENST00000555616 C6orf136Q5SQH8 315 aa9.05□□□□□ -0.96
ACTN1-215ENST00000555616 KHDRBS2Q5VWX1 349 aaKnown RBP9.05□□□□□ -0.96
ACTN1-215ENST00000555616 FAM219BQ5XKK7 198 aa9.05□□□□□ -0.96
ACTN1-215ENST00000555616 ACSM2BQ68CK6 577 aa9.05□□□□□ -0.96
ACTN1-215ENST00000555616 OGFOD2Q6N063 350 aa9.05□□□□□ -0.96
ACTN1-215ENST00000555616 C6orf89Q6UWU4 347 aa9.05□□□□□ -0.96
ACTN1-215ENST00000555616 CLEC18BQ6UXF7 455 aa9.05□□□□□ -0.96
ACTN1-215ENST00000555616 Q6ZS92 163 aa9.05□□□□□ -0.96
ACTN1-215ENST00000555616 Q6ZSR9 355 aa9.05□□□□□ -0.96
ACTN1-215ENST00000555616 ABHD13Q7L211 337 aa9.05□□□□□ -0.96
ACTN1-215ENST00000555616 PAGE2Q7Z2X7 111 aa9.05□□□□□ -0.96
ACTN1-215ENST00000555616 VN1R5Q7Z5H4 357 aa9.05□□□□□ -0.96
ACTN1-215ENST00000555616 YTHDF3Q7Z739 585 aaKnown RBP9.05□□□□□ -0.96
ACTN1-215ENST00000555616 ATCAYQ86WG3 371 aa9.05□□□□□ -0.96
ACTN1-215ENST00000555616 KBTBD2Q8IY47 623 aa9.05□□□□□ -0.96
ACTN1-215ENST00000555616 FAM9CQ8IZT9 166 aa9.05□□□□□ -0.96
ACTN1-215ENST00000555616 ZADH2Q8N4Q0 377 aa9.05□□□□□ -0.96
ACTN1-215ENST00000555616 FNDC5Q8NAU1 212 aa9.05□□□□□ -0.96
ACTN1-215ENST00000555616 CLEC18CQ8NCF0 446 aa9.05□□□□□ -0.96
ACTN1-215ENST00000555616 GALNT11Q8NCW6 608 aa9.05□□□□□ -0.96
ACTN1-215ENST00000555616 OR2T11Q8NH01 316 aa9.05□□□□□ -0.96
ACTN1-215ENST00000555616 CPT1CQ8TCG5 803 aa9.05□□□□□ -0.96
ACTN1-215ENST00000555616 CREB3L4Q8TEY5 395 aa9.05□□□□□ -0.96
ACTN1-215ENST00000555616 THOC3Q96J01 351 aaKnown RBP9.05□□□□□ -0.96
ACTN1-215ENST00000555616 IMMP1LQ96LU5 166 aa9.05□□□□□ -0.96
ACTN1-215ENST00000555616 QRFPRQ96P65 431 aa9.05□□□□□ -0.96
ACTN1-215ENST00000555616 MFRPQ9BY79 579 aa9.05□□□□□ -0.96
ACTN1-215ENST00000555616 OR51B5Q9H339 312 aa9.05□□□□□ -0.96
ACTN1-215ENST00000555616 CLK4Q9HAZ1 481 aaKnown RBP9.05□□□□□ -0.96
ACTN1-215ENST00000555616 ZBTB20Q9HC78 741 aaPredicted RBP9.05□□□□□ -0.96
ACTN1-215ENST00000555616 SLAMF7Q9NQ25 335 aa9.05□□□□□ -0.96
ACTN1-215ENST00000555616 LANCL2Q9NS86 450 aa9.05□□□□□ -0.96
ACTN1-215ENST00000555616 LUZP4Q9P127 313 aa9.05□□□□□ -0.96
ACTN1-215ENST00000555616 HEY2Q9UBP5 337 aa9.05□□□□□ -0.96
ACTN1-215ENST00000555616 EIF3LQ9Y262 564 aaKnown RBP9.05□□□□□ -0.96
ACTN1-215ENST00000555616 CCL27Q9Y4X3 112 aa9.05□□□□□ -0.96
ACTN1-215ENST00000555616 PCDHGA10Q9Y5H3 936 aa9.05□□□□□ -0.96
ACTN1-215ENST00000555616 RELNP78509 3460 aa9.04□□□□□ -0.96
ACTN1-215ENST00000555616 A0A088AWK7 358 aa9.04□□□□□ -0.96
ACTN1-215ENST00000555616 LRIT2A6NDA9 550 aa9.04□□□□□ -0.96
ACTN1-215ENST00000555616 C4orf51C9J302 202 aa9.04□□□□□ -0.96
ACTN1-215ENST00000555616 IDO1P14902 403 aa9.04□□□□□ -0.96
ACTN1-215ENST00000555616 NCF2P19878 526 aaPredicted RBP9.04□□□□□ -0.96
ACTN1-215ENST00000555616 ZNF10P21506 573 aaPredicted RBP9.04□□□□□ -0.96
ACTN1-215ENST00000555616 ARFIP1P53367 373 aa9.04□□□□□ -0.96
ACTN1-215ENST00000555616 AP2B1P63010 937 aa9.04□□□□□ -0.96
ACTN1-215ENST00000555616 RPL38P63173 70 aaKnown RBP9.04□□□□□ -0.96
ACTN1-215ENST00000555616 RHAGQ02094 409 aa9.04□□□□□ -0.96
ACTN1-215ENST00000555616 EMX2Q04743 252 aa9.04□□□□□ -0.96
ACTN1-215ENST00000555616 RPS6KA2Q15349 733 aa9.04□□□□□ -0.96
ACTN1-215ENST00000555616 GSTA3Q16772 222 aa9.04□□□□□ -0.96
ACTN1-215ENST00000555616 GLIPR1L2Q4G1C9 344 aa9.04□□□□□ -0.96
ACTN1-215ENST00000555616 CRB2Q5IJ48 1285 aa9.04□□□□□ -0.96
ACTN1-215ENST00000555616 DEPDC1Q5TB30 811 aa9.04□□□□□ -0.96
ACTN1-215ENST00000555616 FAAH2Q6GMR7 532 aa9.04□□□□□ -0.96
ACTN1-215ENST00000555616 TRIM40Q6P9F5 258 aa9.04□□□□□ -0.96
ACTN1-215ENST00000555616 ISLR2Q6UXK2 745 aa9.04□□□□□ -0.96
ACTN1-215ENST00000555616 LANCL3Q6ZV70 420 aa9.04□□□□□ -0.96
ACTN1-215ENST00000555616 RNF175Q8N4F7 328 aa9.04□□□□□ -0.96
ACTN1-215ENST00000555616 EFCAB3Q8N7B9 438 aa9.04□□□□□ -0.96
ACTN1-215ENST00000555616 OR2L5Q8NG80 312 aa9.04□□□□□ -0.96
ACTN1-215ENST00000555616 OR5T3Q8NGG3 340 aa9.04□□□□□ -0.96
ACTN1-215ENST00000555616 UTP15Q8TED0 518 aaKnown RBP9.04□□□□□ -0.96
ACTN1-215ENST00000555616 METTL21AQ8WXB1 218 aa9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms