RNA–Protein interactions for RNA: ENST00000554486.1

SCFD1-212, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 819 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-212ENST00000554486 SORT1Q99523 831 aa6.01□□□□□ -1.45
SCFD1-212ENST00000554486 NUDT22Q9BRQ3 303 aa6.01□□□□□ -1.45
SCFD1-212ENST00000554486 HAUS8Q9BT25 410 aa6.01□□□□□ -1.45
SCFD1-212ENST00000554486 TRMOQ9BU70 441 aa6.01□□□□□ -1.45
SCFD1-212ENST00000554486 ZNF747Q9BV97 191 aa6.01□□□□□ -1.45
SCFD1-212ENST00000554486 ACAT2Q9BWD1 397 aa6.01□□□□□ -1.45
SCFD1-212ENST00000554486 SHCBP1LQ9BZQ2 653 aa6.01□□□□□ -1.45
SCFD1-212ENST00000554486 PCBD2Q9H0N5 130 aa6.01□□□□□ -1.45
SCFD1-212ENST00000554486 ABCG4Q9H172 646 aa6.01□□□□□ -1.45
SCFD1-212ENST00000554486 CCDC134Q9H6E4 229 aa6.01□□□□□ -1.45
SCFD1-212ENST00000554486 NOL11Q9H8H0 719 aaKnown RBP6.01□□□□□ -1.45
SCFD1-212ENST00000554486 SLCO1B3Q9NPD5 702 aa6.01□□□□□ -1.45
SCFD1-212ENST00000554486 SEMA4BQ9NPR2 832 aaPredicted RBP6.01□□□□□ -1.45
SCFD1-212ENST00000554486 ABCF3Q9NUQ8 709 aa6.01□□□□□ -1.45
SCFD1-212ENST00000554486 HRASLS2Q9NWW9 162 aa6.01□□□□□ -1.45
SCFD1-212ENST00000554486 SIDT1Q9NXL6 827 aaKnown RBP6.01□□□□□ -1.45
SCFD1-212ENST00000554486 VSX1Q9NZR4 365 aaPredicted RBP6.01□□□□□ -1.45
SCFD1-212ENST00000554486 EPHA6Q9UF33 1036 aa6.01□□□□□ -1.45
SCFD1-212ENST00000554486 TAC3Q9UHF0 121 aa6.01□□□□□ -1.45
SCFD1-212ENST00000554486 ZNF225Q9UK10 706 aa6.01□□□□□ -1.45
SCFD1-212ENST00000554486 POMT2Q9UKY4 750 aa6.01□□□□□ -1.45
SCFD1-212ENST00000554486 CHST2Q9Y4C5 530 aa6.01□□□□□ -1.45
SCFD1-212ENST00000554486 ENTPD2Q9Y5L3 495 aa6.01□□□□□ -1.45
SCFD1-212ENST00000554486 SEC16AO15027 2179 aa6□□□□□ -1.45
SCFD1-212ENST00000554486 KCNE1BA0A087WTH5 132 aa6□□□□□ -1.45
SCFD1-212ENST00000554486 LOC105378220A0A1B0GUY1 285 aaPredicted RBP6□□□□□ -1.45
SCFD1-212ENST00000554486 A0A1W2PQM1 296 aa6□□□□□ -1.45
SCFD1-212ENST00000554486 GSAPA4D1B5 854 aa6□□□□□ -1.45
SCFD1-212ENST00000554486 C2orf74A8MZ97 194 aa6□□□□□ -1.45
SCFD1-212ENST00000554486 AHRRA9YTQ3 701 aa6□□□□□ -1.45
SCFD1-212ENST00000554486 ISM1B1AKI9 464 aa6□□□□□ -1.45
SCFD1-212ENST00000554486 TCP11X1B4DZS4 312 aa6□□□□□ -1.45
SCFD1-212ENST00000554486 H3BUI4 141 aa6□□□□□ -1.45
SCFD1-212ENST00000554486 TNFSF14O43557 240 aa6□□□□□ -1.45
SCFD1-212ENST00000554486 KIF1CO43896 1103 aaKnown RBP6□□□□□ -1.45
SCFD1-212ENST00000554486 OR4F21O95013 312 aa6□□□□□ -1.45
SCFD1-212ENST00000554486 MLYCDO95822 493 aa6□□□□□ -1.45
SCFD1-212ENST00000554486 FTH1P19P0C7X4 201 aa6□□□□□ -1.45
SCFD1-212ENST00000554486 C1GALT1C1LP0DN25 315 aa6□□□□□ -1.45
SCFD1-212ENST00000554486 PVRP15151 417 aa6□□□□□ -1.45
SCFD1-212ENST00000554486 GNAZP19086 355 aa6□□□□□ -1.45
SCFD1-212ENST00000554486 CMPK1P30085 196 aa6□□□□□ -1.45
SCFD1-212ENST00000554486 APOBEC3AP31941 199 aaPredicted RBP6□□□□□ -1.45
SCFD1-212ENST00000554486 SERPINB5P36952 375 aa6□□□□□ -1.45
SCFD1-212ENST00000554486 GRIA3P42263 894 aa6□□□□□ -1.45
SCFD1-212ENST00000554486 CASP2P42575 452 aa6□□□□□ -1.45
SCFD1-212ENST00000554486 PIK3CGP48736 1102 aa6□□□□□ -1.45
SCFD1-212ENST00000554486 MAN2A2P49641 1150 aa6□□□□□ -1.45
SCFD1-212ENST00000554486 ACADVLP49748 655 aa6□□□□□ -1.45
SCFD1-212ENST00000554486 CCNG1P51959 295 aa6□□□□□ -1.45
SCFD1-212ENST00000554486 LIMK1P53667 647 aa6□□□□□ -1.45
SCFD1-212ENST00000554486 PKNOX1P55347 436 aa6□□□□□ -1.45
SCFD1-212ENST00000554486 NAA20P61599 178 aa6□□□□□ -1.45
SCFD1-212ENST00000554486 CSNK1G2P78368 415 aa6□□□□□ -1.45
SCFD1-212ENST00000554486 ABATP80404 500 aa6□□□□□ -1.45
SCFD1-212ENST00000554486 NHLH2Q02577 135 aa6□□□□□ -1.45
SCFD1-212ENST00000554486 PRDX1Q06830 199 aaKnown RBP6□□□□□ -1.45
SCFD1-212ENST00000554486 GALNT1Q10472 559 aaPredicted RBP6□□□□□ -1.45
SCFD1-212ENST00000554486 LCP2Q13094 533 aa6□□□□□ -1.45
SCFD1-212ENST00000554486 CHIT1Q13231 466 aa6□□□□□ -1.45
SCFD1-212ENST00000554486 DOC2AQ14183 400 aa6□□□□□ -1.45
SCFD1-212ENST00000554486 E2F2Q14209 437 aa6□□□□□ -1.45
SCFD1-212ENST00000554486 ZIC1Q15915 447 aa6□□□□□ -1.45
SCFD1-212ENST00000554486 RBBP7Q16576 425 aa6□□□□□ -1.45
SCFD1-212ENST00000554486 SLC5A12Q1EHB4 618 aa6□□□□□ -1.45
SCFD1-212ENST00000554486 AMZ1Q400G9 498 aa6□□□□□ -1.45
SCFD1-212ENST00000554486 ICE2Q659A1 982 aa6□□□□□ -1.45
SCFD1-212ENST00000554486 ATG16L1Q676U5 607 aa6□□□□□ -1.45
SCFD1-212ENST00000554486 ZNF425Q6IV72 752 aa6□□□□□ -1.45
SCFD1-212ENST00000554486 ARMC6Q6NXE6 501 aa6□□□□□ -1.45
SCFD1-212ENST00000554486 KLHL35Q6PF15 583 aa6□□□□□ -1.45
SCFD1-212ENST00000554486 CRIP3Q6Q6R5 217 aa6□□□□□ -1.45
SCFD1-212ENST00000554486 SPESP1Q6UW49 350 aa6□□□□□ -1.45
SCFD1-212ENST00000554486 GPRIN3Q6ZVF9 776 aa6□□□□□ -1.45
SCFD1-212ENST00000554486 MED25Q71SY5 747 aa6□□□□□ -1.45
SCFD1-212ENST00000554486 TMPRSS11BQ86T26 416 aa6□□□□□ -1.45
SCFD1-212ENST00000554486 PAQR7Q86WK9 346 aa6□□□□□ -1.45
SCFD1-212ENST00000554486 L3MBTL4Q8NA19 623 aa6□□□□□ -1.45
SCFD1-212ENST00000554486 ABHD11Q8NFV4 315 aa6□□□□□ -1.45
SCFD1-212ENST00000554486 OR4F6Q8NGB9 312 aa6□□□□□ -1.45
SCFD1-212ENST00000554486 OR4K1Q8NGD4 311 aa6□□□□□ -1.45
SCFD1-212ENST00000554486 LRRC8CQ8TDW0 803 aa6□□□□□ -1.45
SCFD1-212ENST00000554486 AGAP11Q8TF27 550 aa6□□□□□ -1.45
SCFD1-212ENST00000554486 SLC5A11Q8WWX8 675 aa6□□□□□ -1.45
SCFD1-212ENST00000554486 NCSTNQ92542 709 aa6□□□□□ -1.45
SCFD1-212ENST00000554486 EXTL1Q92935 676 aa6□□□□□ -1.45
SCFD1-212ENST00000554486 SLC22A18Q96BI1 424 aa6□□□□□ -1.45
SCFD1-212ENST00000554486 WDR34Q96EX3 536 aa6□□□□□ -1.45
SCFD1-212ENST00000554486 PRR11Q96HE9 360 aaPredicted RBP6□□□□□ -1.45
SCFD1-212ENST00000554486 ZNF317Q96PQ6 595 aaPredicted RBP6□□□□□ -1.45
SCFD1-212ENST00000554486 MAP3K3Q99759 626 aa6□□□□□ -1.45
SCFD1-212ENST00000554486 CCDC3Q9BQI4 270 aa6□□□□□ -1.45
SCFD1-212ENST00000554486 NTMT1Q9BV86 223 aa6□□□□□ -1.45
SCFD1-212ENST00000554486 RAB33BQ9H082 229 aa6□□□□□ -1.45
SCFD1-212ENST00000554486 SPNS1Q9H2V7 528 aa6□□□□□ -1.45
SCFD1-212ENST00000554486 LRRN3Q9H3W5 708 aa6□□□□□ -1.45
SCFD1-212ENST00000554486 ZMAT3Q9HA38 289 aaKnown RBP6□□□□□ -1.45
SCFD1-212ENST00000554486 MRPS30Q9NP92 439 aaKnown RBP6□□□□□ -1.45
SCFD1-212ENST00000554486 MID1IP1Q9NPA3 183 aa6□□□□□ -1.45
SCFD1-212ENST00000554486 THAP1Q9NVV9 213 aa6□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms