RNA–Protein interactions for RNA: ENST00000552984.1

TUBA1B-208, Transcript of tubulin alpha 1b, human

TSL 4

Gene TUBA1B, Length 574 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TUBA1B-208	ENST00000552984	C9orf40	Q8IXQ3	194 aa		10.64	□□□□□ -0.71
TUBA1B-208	ENST00000552984	OR5M9	Q8NGP3	310 aa		10.64	□□□□□ -0.71
TUBA1B-208	ENST00000552984	HUS1B	Q8NHY5	278 aa		10.64	□□□□□ -0.71
TUBA1B-208	ENST00000552984	CA5BP1	Q8WTZ4	195 aa		10.64	□□□□□ -0.71
TUBA1B-208	ENST00000552984	ZNF717	Q9BY31	904 aa	Predicted RBP	10.64	□□□□□ -0.71
TUBA1B-208	ENST00000552984	UCK2	Q9BZX2	261 aa		10.64	□□□□□ -0.71
TUBA1B-208	ENST00000552984	PHACTR1	Q9C0D0	580 aa		10.64	□□□□□ -0.71
TUBA1B-208	ENST00000552984	DMRT3	Q9NQL9	472 aa		10.64	□□□□□ -0.71
TUBA1B-208	ENST00000552984	SNX15	Q9NRS6	342 aa		10.64	□□□□□ -0.71
TUBA1B-208	ENST00000552984	PNPLA3	Q9NST1	481 aa		10.64	□□□□□ -0.71
TUBA1B-208	ENST00000552984	UTP11	Q9Y3A2	253 aa	Known RBP	10.64	□□□□□ -0.71
TUBA1B-208	ENST00000552984	ATG4B	Q9Y4P1	393 aa		10.64	□□□□□ -0.71
TUBA1B-208	ENST00000552984	AKAP6	Q13023	2319 aa		10.63	□□□□□ -0.71
TUBA1B-208	ENST00000552984	SPG11	Q96JI7	2443 aa		10.63	□□□□□ -0.71
TUBA1B-208	ENST00000552984	GLOD5	A6NK44	160 aa		10.63	□□□□□ -0.71
TUBA1B-208	ENST00000552984	NPIPA2	E9PIF3	369 aa		10.63	□□□□□ -0.71
TUBA1B-208	ENST00000552984	NPIPA3	F8WFD2	350 aa		10.63	□□□□□ -0.71
TUBA1B-208	ENST00000552984	TMPRSS11D	O60235	418 aa		10.63	□□□□□ -0.71
TUBA1B-208	ENST00000552984	EED	O75530	441 aa	Known RBP	10.63	□□□□□ -0.71
TUBA1B-208	ENST00000552984	GLS	O94925	669 aa	Predicted RBP	10.63	□□□□□ -0.71
TUBA1B-208	ENST00000552984	NADK	O95544	446 aa	Predicted RBP	10.63	□□□□□ -0.71
TUBA1B-208	ENST00000552984	C2	P06681	752 aa		10.63	□□□□□ -0.71
TUBA1B-208	ENST00000552984	EPB42	P16452	691 aa		10.63	□□□□□ -0.71
TUBA1B-208	ENST00000552984	ELAVL4	P26378	380 aa	Known RBP	10.63	□□□□□ -0.71
TUBA1B-208	ENST00000552984	PIGA	P37287	484 aa		10.63	□□□□□ -0.71
TUBA1B-208	ENST00000552984	RAP1GDS1	P52306	607 aa		10.63	□□□□□ -0.71
TUBA1B-208	ENST00000552984	IGLV3-21	P80748	117 aa	Predicted RBP	10.63	□□□□□ -0.71
TUBA1B-208	ENST00000552984	TNFRSF17	Q02223	184 aa		10.63	□□□□□ -0.71
TUBA1B-208	ENST00000552984	FOLH1	Q04609	750 aa		10.63	□□□□□ -0.71
TUBA1B-208	ENST00000552984	ASPH	Q12797	758 aa		10.63	□□□□□ -0.71
TUBA1B-208	ENST00000552984	ILF2	Q12905	390 aa	Known RBP	10.63	□□□□□ -0.71
TUBA1B-208	ENST00000552984	SERTAD2	Q14140	314 aa		10.63	□□□□□ -0.71
TUBA1B-208	ENST00000552984	RCN2	Q14257	317 aa		10.63	□□□□□ -0.71
TUBA1B-208	ENST00000552984	SETDB1	Q15047	1291 aa		10.63	□□□□□ -0.71
TUBA1B-208	ENST00000552984	PFKFB4	Q16877	469 aa		10.63	□□□□□ -0.71
TUBA1B-208	ENST00000552984	TMEM35A	Q53FP2	167 aa		10.63	□□□□□ -0.71
TUBA1B-208	ENST00000552984	DEPDC1	Q5TB30	811 aa		10.63	□□□□□ -0.71
TUBA1B-208	ENST00000552984	OR4C11	Q6IEV9	310 aa		10.63	□□□□□ -0.71
TUBA1B-208	ENST00000552984	ARHGAP11A	Q6P4F7	1023 aa		10.63	□□□□□ -0.71
TUBA1B-208	ENST00000552984	MEX3B	Q6ZN04	569 aa	Known RBP	10.63	□□□□□ -0.71
TUBA1B-208	ENST00000552984	RTL4	Q6ZR62	310 aa		10.63	□□□□□ -0.71
TUBA1B-208	ENST00000552984	PLD6	Q8N2A8	252 aa	Known RBP	10.63	□□□□□ -0.71
TUBA1B-208	ENST00000552984	TMEM251	Q8N6I4	163 aa		10.63	□□□□□ -0.71
TUBA1B-208	ENST00000552984	SRFBP1	Q8NEF9	429 aa	Known RBP	10.63	□□□□□ -0.71
TUBA1B-208	ENST00000552984	CMTM7	Q96FZ5	175 aa		10.63	□□□□□ -0.71
TUBA1B-208	ENST00000552984	CDK15	Q96Q40	435 aa		10.63	□□□□□ -0.71
TUBA1B-208	ENST00000552984	CNPPD1	Q9BV87	410 aa		10.63	□□□□□ -0.71
TUBA1B-208	ENST00000552984	ROGDI	Q9GZN7	287 aa		10.63	□□□□□ -0.71
TUBA1B-208	ENST00000552984	RAB17	Q9H0T7	212 aa		10.63	□□□□□ -0.71
TUBA1B-208	ENST00000552984	RPF2	Q9H7B2	306 aa	Known RBP	10.63	□□□□□ -0.71
TUBA1B-208	ENST00000552984	ZDHHC11	Q9H8X9	412 aa		10.63	□□□□□ -0.71
TUBA1B-208	ENST00000552984	NPDC1	Q9NQX5	325 aa	Predicted RBP	10.63	□□□□□ -0.71
TUBA1B-208	ENST00000552984	ZNF358	Q9NW07	568 aa		10.63	□□□□□ -0.71
TUBA1B-208	ENST00000552984	TUBA8	Q9NY65	449 aa	Predicted RBP	10.63	□□□□□ -0.71
TUBA1B-208	ENST00000552984	CPSF2	Q9P2I0	782 aa	Known RBP	10.63	□□□□□ -0.71
TUBA1B-208	ENST00000552984	ITGB1BP2	Q9UKP3	347 aa		10.63	□□□□□ -0.71
TUBA1B-208	ENST00000552984	RNF6	Q9Y252	685 aa		10.63	□□□□□ -0.71
TUBA1B-208	ENST00000552984	ACOT9	Q9Y305	439 aa		10.63	□□□□□ -0.71
TUBA1B-208	ENST00000552984	DOCK7	Q96N67	2140 aa		10.63	□□□□□ -0.71
TUBA1B-208	ENST00000552984	HIVEP1	P15822	2718 aa		10.63	□□□□□ -0.71
TUBA1B-208	ENST00000552984		A0A096LPK6	155 aa		10.62	□□□□□ -0.71
TUBA1B-208	ENST00000552984	ACOT7	O00154	380 aa		10.62	□□□□□ -0.71
TUBA1B-208	ENST00000552984	GBA	P04062	536 aa		10.62	□□□□□ -0.71
TUBA1B-208	ENST00000552984	ALDOA	P04075	364 aa	Known RBP	10.62	□□□□□ -0.71
TUBA1B-208	ENST00000552984	IGKV3-11	P04433	115 aa		10.62	□□□□□ -0.71
TUBA1B-208	ENST00000552984	GFAP	P14136	432 aa		10.62	□□□□□ -0.71
TUBA1B-208	ENST00000552984	CRABP2	P29373	138 aa		10.62	□□□□□ -0.71
TUBA1B-208	ENST00000552984	STT3A	P46977	705 aa		10.62	□□□□□ -0.71
TUBA1B-208	ENST00000552984	NEK2	P51955	445 aa		10.62	□□□□□ -0.71
TUBA1B-208	ENST00000552984	NUP107	P57740	925 aa		10.62	□□□□□ -0.71
TUBA1B-208	ENST00000552984	ETF1	P62495	437 aa	Known RBP	10.62	□□□□□ -0.71
TUBA1B-208	ENST00000552984	HERVK_113	P63132	956 aa		10.62	□□□□□ -0.71
TUBA1B-208	ENST00000552984	ERVK-8	P63133	956 aa		10.62	□□□□□ -0.71
TUBA1B-208	ENST00000552984	FOXO1	Q12778	655 aa		10.62	□□□□□ -0.71
TUBA1B-208	ENST00000552984	NAB1	Q13506	487 aa		10.62	□□□□□ -0.71
TUBA1B-208	ENST00000552984	CPSF6	Q16630	551 aa	Known RBP eCLIP	10.62	□□□□□ -0.71
TUBA1B-208	ENST00000552984	PRAMEF20	Q5VT98	475 aa		10.62	□□□□□ -0.71
TUBA1B-208	ENST00000552984	ADGRD1	Q6QNK2	874 aa		10.62	□□□□□ -0.71
TUBA1B-208	ENST00000552984	LYPD8	Q6UX82	237 aa		10.62	□□□□□ -0.71
TUBA1B-208	ENST00000552984	FAM47E	Q6ZV65	393 aa		10.62	□□□□□ -0.71
TUBA1B-208	ENST00000552984	CHSY3	Q70JA7	882 aa		10.62	□□□□□ -0.71
TUBA1B-208	ENST00000552984	GOLGA7	Q7Z5G4	137 aa		10.62	□□□□□ -0.71
TUBA1B-208	ENST00000552984	GPALPP1	Q8IXQ4	340 aa		10.62	□□□□□ -0.71
TUBA1B-208	ENST00000552984	ACBD4	Q8NC06	268 aa		10.62	□□□□□ -0.71
TUBA1B-208	ENST00000552984	ANP32B	Q92688	251 aa	Known RBP	10.62	□□□□□ -0.71
TUBA1B-208	ENST00000552984	UBE2E3	Q969T4	207 aa		10.62	□□□□□ -0.71
TUBA1B-208	ENST00000552984	SENP5	Q96HI0	755 aa	Predicted RBP	10.62	□□□□□ -0.71
TUBA1B-208	ENST00000552984	GPR78	Q96P69	363 aa		10.62	□□□□□ -0.71
TUBA1B-208	ENST00000552984	DGAT2	Q96PD7	388 aa		10.62	□□□□□ -0.71
TUBA1B-208	ENST00000552984	GAL3ST4	Q96RP7	486 aa		10.62	□□□□□ -0.71
TUBA1B-208	ENST00000552984	SMC6	Q96SB8	1091 aa		10.62	□□□□□ -0.71
TUBA1B-208	ENST00000552984	ERVK-6	Q9BXR3	956 aa		10.62	□□□□□ -0.71
TUBA1B-208	ENST00000552984	TP63	Q9H3D4	680 aa	Predicted RBP	10.62	□□□□□ -0.71
TUBA1B-208	ENST00000552984	ACTR8	Q9H981	624 aa		10.62	□□□□□ -0.71
TUBA1B-208	ENST00000552984	ZDHHC18	Q9NUE0	388 aa		10.62	□□□□□ -0.71
TUBA1B-208	ENST00000552984	NINJ2	Q9NZG7	142 aa		10.62	□□□□□ -0.71
TUBA1B-208	ENST00000552984	COQ3	Q9NZJ6	369 aa		10.62	□□□□□ -0.71
TUBA1B-208	ENST00000552984	COPS7A	Q9UBW8	275 aa		10.62	□□□□□ -0.71
TUBA1B-208	ENST00000552984	ERVK-19	Q9WJR5	959 aa		10.62	□□□□□ -0.71
TUBA1B-208	ENST00000552984	RNF11	Q9Y3C5	154 aa		10.62	□□□□□ -0.71

Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms