RNA–Protein interactions for RNA: ENST00000550376.5

PRDM4-205, Transcript of PR/SET domain 4, humanhuman

TSL 1 (best)

Gene PRDM4, Length 2,591 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM4-205ENST00000550376 ACTR10Q9NZ32 417 aa19.84■□□□□ 0.77
PRDM4-205ENST00000550376 ADAM29Q9UKF5 820 aa19.84■□□□□ 0.77
PRDM4-205ENST00000550376 SPTY2D1-AS1A0A0U1RR47 76 aa19.83■□□□□ 0.77
PRDM4-205ENST00000550376 OR12D1P0DN82 309 aa19.83■□□□□ 0.77
PRDM4-205ENST00000550376 AGXTP21549 392 aa19.83■□□□□ 0.77
PRDM4-205ENST00000550376 NR1H2P55055 460 aa19.83■□□□□ 0.77
PRDM4-205ENST00000550376 DEFB134Q4QY38 66 aa19.83■□□□□ 0.77
PRDM4-205ENST00000550376 FCRL6Q6DN72 434 aa19.83■□□□□ 0.77
PRDM4-205ENST00000550376 LSRQ86X29 649 aaPredicted RBP19.83■□□□□ 0.77
PRDM4-205ENST00000550376 XAGE5Q8WWM1 108 aa19.83■□□□□ 0.77
PRDM4-205ENST00000550376 TMEM38AQ9H6F2 299 aa19.83■□□□□ 0.77
PRDM4-205ENST00000550376 REEP1Q9H902 201 aa19.83■□□□□ 0.77
PRDM4-205ENST00000550376 STARD5Q9NSY2 213 aa19.83■□□□□ 0.77
PRDM4-205ENST00000550376 LOC100130705A0A1B0GUX0 176 aa19.83■□□□□ 0.76
PRDM4-205ENST00000550376 PRAMEF27A3QJZ7 478 aa19.83■□□□□ 0.76
PRDM4-205ENST00000550376 HMGN4O00479 90 aa19.83■□□□□ 0.76
PRDM4-205ENST00000550376 HPRP00739 348 aa19.83■□□□□ 0.76
PRDM4-205ENST00000550376 EEF1B2P24534 225 aaKnown RBP19.83■□□□□ 0.76
PRDM4-205ENST00000550376 CD6P30203 668 aa19.83■□□□□ 0.76
PRDM4-205ENST00000550376 GSTT1P30711 240 aa19.83■□□□□ 0.76
PRDM4-205ENST00000550376 DNAJA1P31689 397 aaKnown RBP19.83■□□□□ 0.76
PRDM4-205ENST00000550376 GSSP48637 474 aa19.83■□□□□ 0.76
PRDM4-205ENST00000550376 CLCN2P51788 898 aa19.83■□□□□ 0.76
PRDM4-205ENST00000550376 GANABQ14697 944 aaKnown RBP19.83■□□□□ 0.76
PRDM4-205ENST00000550376 MYBPC3Q14896 1274 aa19.83■□□□□ 0.76
PRDM4-205ENST00000550376 SYPL1Q16563 259 aa19.83■□□□□ 0.76
PRDM4-205ENST00000550376 Q7L0L9 218 aa19.83■□□□□ 0.76
PRDM4-205ENST00000550376 WDR53Q7Z5U6 358 aaPredicted RBP19.83■□□□□ 0.76
PRDM4-205ENST00000550376 OR4N5Q8IXE1 308 aa19.83■□□□□ 0.76
PRDM4-205ENST00000550376 ATG16L2Q8NAA4 619 aa19.83■□□□□ 0.76
PRDM4-205ENST00000550376 FAM46DQ8NEK8 389 aa19.83■□□□□ 0.76
PRDM4-205ENST00000550376 ZNF555Q8NEP9 628 aa19.83■□□□□ 0.76
PRDM4-205ENST00000550376 PJA1Q8NG27 643 aa19.83■□□□□ 0.76
PRDM4-205ENST00000550376 GPBAR1Q8TDU6 330 aa19.83■□□□□ 0.76
PRDM4-205ENST00000550376 TMEM19Q96HH6 336 aa19.83■□□□□ 0.76
PRDM4-205ENST00000550376 HRASLS2Q9NWW9 162 aa19.83■□□□□ 0.76
PRDM4-205ENST00000550376 USE1Q9NZ43 259 aa19.83■□□□□ 0.76
PRDM4-205ENST00000550376 MRPS2Q9Y399 296 aaKnown RBP19.83■□□□□ 0.76
PRDM4-205ENST00000550376 SPTBP11277 2137 aa19.82■□□□□ 0.76
PRDM4-205ENST00000550376 KRBA1A5PL33 1030 aa19.82■□□□□ 0.76
PRDM4-205ENST00000550376 KDM1AO60341 852 aa19.82■□□□□ 0.76
PRDM4-205ENST00000550376 ARAFP10398 606 aa19.82■□□□□ 0.76
PRDM4-205ENST00000550376 CTSEP14091 401 aa19.82■□□□□ 0.76
PRDM4-205ENST00000550376 IL9P15248 144 aa19.82■□□□□ 0.76
PRDM4-205ENST00000550376 SYT13Q7L8C5 426 aa19.82■□□□□ 0.76
PRDM4-205ENST00000550376 UBE2FQ969M7 185 aa19.82■□□□□ 0.76
PRDM4-205ENST00000550376 WFDC6Q9BQY6 131 aa19.82■□□□□ 0.76
PRDM4-205ENST00000550376 ZCCHC3Q9NUD5 404 aaKnown RBP19.82■□□□□ 0.76
PRDM4-205ENST00000550376 IFT80Q9P2H3 777 aaPredicted RBP19.82■□□□□ 0.76
PRDM4-205ENST00000550376 TRPC4Q9UBN4 977 aa19.82■□□□□ 0.76
PRDM4-205ENST00000550376 WDFY4Q6ZS81 3184 aa19.82■□□□□ 0.76
PRDM4-205ENST00000550376 HCRTR1O43613 425 aa19.82■□□□□ 0.76
PRDM4-205ENST00000550376 ATXN8OSP0DMR3 200 aa19.82■□□□□ 0.76
PRDM4-205ENST00000550376 MAPK11Q15759 364 aa19.82■□□□□ 0.76
PRDM4-205ENST00000550376 FIGLAQ6QHK4 219 aa19.82■□□□□ 0.76
PRDM4-205ENST00000550376 TMEM107Q6UX40 140 aa19.82■□□□□ 0.76
PRDM4-205ENST00000550376 Q6ZPB1 254 aaPredicted RBP19.82■□□□□ 0.76
PRDM4-205ENST00000550376 PRSS41Q7RTY9 318 aa19.82■□□□□ 0.76
PRDM4-205ENST00000550376 RLIMQ9NVW2 624 aa19.82■□□□□ 0.76
PRDM4-205ENST00000550376 B4DGG1 531 aa19.81■□□□□ 0.76
PRDM4-205ENST00000550376 CTSBP07858 339 aa19.81■□□□□ 0.76
PRDM4-205ENST00000550376 FRKP42685 505 aaPredicted RBP19.81■□□□□ 0.76
PRDM4-205ENST00000550376 ARHGDIAP52565 204 aa19.81■□□□□ 0.76
PRDM4-205ENST00000550376 CDH12P55289 794 aa19.81■□□□□ 0.76
PRDM4-205ENST00000550376 ITGA1P56199 1179 aa19.81■□□□□ 0.76
PRDM4-205ENST00000550376 FZD5Q13467 585 aa19.81■□□□□ 0.76
PRDM4-205ENST00000550376 RAPSNQ13702 412 aa19.81■□□□□ 0.76
PRDM4-205ENST00000550376 LTB4RQ15722 352 aa19.81■□□□□ 0.76
PRDM4-205ENST00000550376 ZNF630Q2M218 657 aaPredicted RBP19.81■□□□□ 0.76
PRDM4-205ENST00000550376 MRM1Q6IN84 353 aaKnown RBP19.81■□□□□ 0.76
PRDM4-205ENST00000550376 THAP5Q7Z6K1 395 aa19.81■□□□□ 0.76
PRDM4-205ENST00000550376 ASPGQ86U10 573 aa19.81■□□□□ 0.76
PRDM4-205ENST00000550376 APLFQ8IW19 511 aaPredicted RBP19.81■□□□□ 0.76
PRDM4-205ENST00000550376 C8orf59Q8N0T1 100 aaPredicted RBP19.81■□□□□ 0.76
PRDM4-205ENST00000550376 TBC1D19Q8N5T2 526 aa19.81■□□□□ 0.76
PRDM4-205ENST00000550376 SUN3Q8TAQ9 357 aa19.81■□□□□ 0.76
PRDM4-205ENST00000550376 CNIH3Q8TBE1 160 aa19.81■□□□□ 0.76
PRDM4-205ENST00000550376 C16orf58Q96GQ5 468 aa19.81■□□□□ 0.76
PRDM4-205ENST00000550376 OR2A5Q96R48 311 aa19.81■□□□□ 0.76
PRDM4-205ENST00000550376 ORAI3Q9BRQ5 295 aa19.81■□□□□ 0.76
PRDM4-205ENST00000550376 C3orf18Q9UK00 162 aa19.81■□□□□ 0.76
PRDM4-205ENST00000550376 FPR1P21462 350 aa19.81■□□□□ 0.76
PRDM4-205ENST00000550376 CD47Q08722 323 aa19.81■□□□□ 0.76
PRDM4-205ENST00000550376 ZNF687Q8N1G0 1237 aa19.81■□□□□ 0.76
PRDM4-205ENST00000550376 COL26A1Q96A83 441 aa19.81■□□□□ 0.76
PRDM4-205ENST00000550376 FAIM2Q9BWQ8 316 aa19.81■□□□□ 0.76
PRDM4-205ENST00000550376 EQTNQ9NQ60 294 aa19.81■□□□□ 0.76
PRDM4-205ENST00000550376 SLC2A4RGQ9NR83 387 aa19.81■□□□□ 0.76
PRDM4-205ENST00000550376 FAM170BA6NMN3 283 aa19.8■□□□□ 0.76
PRDM4-205ENST00000550376 C5orf58C9J3I9 102 aa19.8■□□□□ 0.76
PRDM4-205ENST00000550376 PROM1O43490 865 aa19.8■□□□□ 0.76
PRDM4-205ENST00000550376 TFPTP0C1Z6 253 aa19.8■□□□□ 0.76
PRDM4-205ENST00000550376 DRD2P14416 443 aa19.8■□□□□ 0.76
PRDM4-205ENST00000550376 PCBP3P57721 371 aaKnown RBP19.8■□□□□ 0.76
PRDM4-205ENST00000550376 RBBP4Q09028 425 aa19.8■□□□□ 0.76
PRDM4-205ENST00000550376 IFI44LQ53G44 452 aa19.8■□□□□ 0.76
PRDM4-205ENST00000550376 LAIR2Q6ISS4 152 aa19.8■□□□□ 0.76
PRDM4-205ENST00000550376 REEP3Q6NUK4 255 aa19.8■□□□□ 0.76
PRDM4-205ENST00000550376 SIMC1Q8NDZ2 872 aa19.8■□□□□ 0.76
PRDM4-205ENST00000550376 KAT2AQ92830 837 aa19.8■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms