RNA–Protein interactions for RNA: ENST00000549686.5

LETMD1-220, Transcript of LETM1 domain containing 1, humanhuman

TSL 2

Gene LETMD1, Length 563 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-220ENST00000549686 GPR75O95800 540 aa16.38■□□□□ 0.21
LETMD1-220ENST00000549686 KLK3P07288 261 aaPredicted RBP16.38■□□□□ 0.21
LETMD1-220ENST00000549686 ZCCHC18P0CG32 403 aa16.38■□□□□ 0.21
LETMD1-220ENST00000549686 ITGAXP20702 1163 aa16.38■□□□□ 0.21
LETMD1-220ENST00000549686 RORAP35398 523 aa16.38■□□□□ 0.21
LETMD1-220ENST00000549686 XCR1P46094 333 aa16.38■□□□□ 0.21
LETMD1-220ENST00000549686 OR1D4P47884 311 aa16.38■□□□□ 0.21
LETMD1-220ENST00000549686 MANFP55145 182 aaKnown RBP16.38■□□□□ 0.21
LETMD1-220ENST00000549686 MAT1AQ00266 395 aaKnown RBP16.38■□□□□ 0.21
LETMD1-220ENST00000549686 MPEG1Q2M385 716 aa16.38■□□□□ 0.21
LETMD1-220ENST00000549686 NKAIN1Q4KMZ8 207 aa16.38■□□□□ 0.21
LETMD1-220ENST00000549686 ASRGL1Q7L266 308 aa16.38■□□□□ 0.21
LETMD1-220ENST00000549686 ARHGAP24Q8N264 748 aa16.38■□□□□ 0.21
LETMD1-220ENST00000549686 GALNT15Q8N3T1 639 aa16.38■□□□□ 0.21
LETMD1-220ENST00000549686 METTL27Q8N6F8 245 aaPredicted RBP16.38■□□□□ 0.21
LETMD1-220ENST00000549686 PEX11GQ96HA9 241 aa16.38■□□□□ 0.21
LETMD1-220ENST00000549686 PHF12Q96QT6 1004 aa16.38■□□□□ 0.21
LETMD1-220ENST00000549686 CTRCQ99895 268 aa16.38■□□□□ 0.21
LETMD1-220ENST00000549686 TGIF2Q9GZN2 237 aa16.38■□□□□ 0.21
LETMD1-220ENST00000549686 MMADHCQ9H3L0 296 aaPredicted RBP16.38■□□□□ 0.21
LETMD1-220ENST00000549686 C14orf105Q9NVL8 296 aa16.38■□□□□ 0.21
LETMD1-220ENST00000549686 TRPC4Q9UBN4 977 aa16.38■□□□□ 0.21
LETMD1-220ENST00000549686 ZNF282Q9UDV7 671 aaPredicted RBP16.38■□□□□ 0.21
LETMD1-220ENST00000549686 PRPF19Q9UMS4 504 aaKnown RBP16.38■□□□□ 0.21
LETMD1-220ENST00000549686 VPS4AQ9UN37 437 aa16.38■□□□□ 0.21
LETMD1-220ENST00000549686 TMEM184BQ9Y519 407 aaPredicted RBP16.38■□□□□ 0.21
LETMD1-220ENST00000549686 MAU2Q9Y6X3 613 aa16.38■□□□□ 0.21
LETMD1-220ENST00000549686 PCNX2A6NKB5 2137 aa16.37■□□□□ 0.21
LETMD1-220ENST00000549686 GLOD5A6NK44 160 aa16.37■□□□□ 0.21
LETMD1-220ENST00000549686 MEN1O00255 615 aa16.37■□□□□ 0.21
LETMD1-220ENST00000549686 ERAL1O75616 437 aaKnown RBP16.37■□□□□ 0.21
LETMD1-220ENST00000549686 SLITRK5O94991 958 aa16.37■□□□□ 0.21
LETMD1-220ENST00000549686 ALBP02768 609 aa16.37■□□□□ 0.21
LETMD1-220ENST00000549686 IFI6P09912 130 aa16.37■□□□□ 0.21
LETMD1-220ENST00000549686 PPIBP23284 216 aaKnown RBP16.37■□□□□ 0.21
LETMD1-220ENST00000549686 SLC25A3Q00325 362 aa16.37■□□□□ 0.21
LETMD1-220ENST00000549686 SPATS1Q496A3 300 aa16.37■□□□□ 0.21
LETMD1-220ENST00000549686 C1orf189Q5VU69 101 aa16.37■□□□□ 0.21
LETMD1-220ENST00000549686 ZNF385CQ66K41 422 aaPredicted RBP16.37■□□□□ 0.21
LETMD1-220ENST00000549686 C8orf82Q6P1X6 216 aaPredicted RBP16.37■□□□□ 0.21
LETMD1-220ENST00000549686 DLEU7Q6UYE1 221 aa16.37■□□□□ 0.21
LETMD1-220ENST00000549686 ANKRD46Q86W74 232 aa16.37■□□□□ 0.21
LETMD1-220ENST00000549686 LRRC25Q8N386 305 aaPredicted RBP16.37■□□□□ 0.21
LETMD1-220ENST00000549686 OR8J3Q8NGG0 315 aa16.37■□□□□ 0.21
LETMD1-220ENST00000549686 OR4A15Q8NGL6 344 aa16.37■□□□□ 0.21
LETMD1-220ENST00000549686 ADAMTS14Q8WXS8 1223 aa16.37■□□□□ 0.21
LETMD1-220ENST00000549686 CIDECQ96AQ7 238 aaPredicted RBP16.37■□□□□ 0.21
LETMD1-220ENST00000549686 FKBP10Q96AY3 582 aa16.37■□□□□ 0.21
LETMD1-220ENST00000549686 ZNF681Q96N22 645 aa16.37■□□□□ 0.21
LETMD1-220ENST00000549686 CGREF1Q99674 301 aa16.37■□□□□ 0.21
LETMD1-220ENST00000549686 GPATCH1Q9BRR8 931 aaKnown RBP16.37■□□□□ 0.21
LETMD1-220ENST00000549686 PELOQ9BRX2 385 aaKnown RBP16.37■□□□□ 0.21
LETMD1-220ENST00000549686 YIPF2Q9BWQ6 316 aa16.37■□□□□ 0.21
LETMD1-220ENST00000549686 SPAG4Q9NPE6 437 aa16.37■□□□□ 0.21
LETMD1-220ENST00000549686 PRTFDC1Q9NRG1 225 aa16.37■□□□□ 0.21
LETMD1-220ENST00000549686 SEMA3GQ9NS98 782 aa16.37■□□□□ 0.21
LETMD1-220ENST00000549686 TAS2R9Q9NYW1 312 aa16.37■□□□□ 0.21
LETMD1-220ENST00000549686 C5AR2Q9P296 337 aa16.37■□□□□ 0.21
LETMD1-220ENST00000549686 PISDQ9UG56 409 aa16.37■□□□□ 0.21
LETMD1-220ENST00000549686 PCDHGA8Q9Y5G5 932 aa16.37■□□□□ 0.21
LETMD1-220ENST00000549686 FAM186AA6NE01 2351 aa16.37■□□□□ 0.21
LETMD1-220ENST00000549686 COL27A1Q8IZC6 1860 aaPredicted RBP16.37■□□□□ 0.21
LETMD1-220ENST00000549686 GVINP1Q7Z2Y8 2422 aa16.36■□□□□ 0.21
LETMD1-220ENST00000549686 IGLV3-12A0A075B6K2 115 aa16.36■□□□□ 0.21
LETMD1-220ENST00000549686 CFAP73A6NFT4 308 aa16.36■□□□□ 0.21
LETMD1-220ENST00000549686 FXYD1O00168 92 aa16.36■□□□□ 0.21
LETMD1-220ENST00000549686 AGRPO00253 132 aa16.36■□□□□ 0.21
LETMD1-220ENST00000549686 PRKRAO75569 313 aaKnown RBP16.36■□□□□ 0.21
LETMD1-220ENST00000549686 DNAJC8O75937 253 aaPredicted RBP16.36■□□□□ 0.21
LETMD1-220ENST00000549686 KCNK5O95279 499 aa16.36■□□□□ 0.21
LETMD1-220ENST00000549686 BMP10O95393 424 aa16.36■□□□□ 0.21
LETMD1-220ENST00000549686 CPSF4O95639 269 aaKnown RBP16.36■□□□□ 0.21
LETMD1-220ENST00000549686 C6orf47O95873 294 aa16.36■□□□□ 0.21
LETMD1-220ENST00000549686 NTRK1P04629 796 aa16.36■□□□□ 0.21
LETMD1-220ENST00000549686 CYC1P08574 325 aa16.36■□□□□ 0.21
LETMD1-220ENST00000549686 CD63P08962 238 aa16.36■□□□□ 0.21
LETMD1-220ENST00000549686 XKP51811 444 aa16.36■□□□□ 0.21
LETMD1-220ENST00000549686 NCBP2P52298 156 aaKnown RBP eCLIP16.36■□□□□ 0.212e-8■■□□□ 11.9
LETMD1-220ENST00000549686 MAPK10P53779 464 aa16.36■□□□□ 0.21
LETMD1-220ENST00000549686 PSME3P61289 254 aa16.36■□□□□ 0.21
LETMD1-220ENST00000549686 FOLH1Q04609 750 aa16.36■□□□□ 0.21
LETMD1-220ENST00000549686 OCA2Q04671 838 aa16.36■□□□□ 0.21
LETMD1-220ENST00000549686 SERTAD2Q14140 314 aa16.36■□□□□ 0.21
LETMD1-220ENST00000549686 PRSS53Q2L4Q9 553 aa16.36■□□□□ 0.21
LETMD1-220ENST00000549686 QSOX2Q6ZRP7 698 aa16.36■□□□□ 0.21
LETMD1-220ENST00000549686 DEFB107AQ8IZN7 70 aa16.36■□□□□ 0.21
LETMD1-220ENST00000549686 CLECL1Q8IZS7 167 aa16.36■□□□□ 0.21
LETMD1-220ENST00000549686 DTWD1Q8N5C7 304 aa16.36■□□□□ 0.21
LETMD1-220ENST00000549686 PSMA8Q8TAA3 256 aa16.36■□□□□ 0.21
LETMD1-220ENST00000549686 MIEF2Q96C03 454 aa16.36■□□□□ 0.21
LETMD1-220ENST00000549686 CNRIP1Q96F85 164 aaPredicted RBP16.36■□□□□ 0.21
LETMD1-220ENST00000549686 AMDHD1Q96NU7 426 aa16.36■□□□□ 0.21
LETMD1-220ENST00000549686 ULBP3Q9BZM4 244 aa16.36■□□□□ 0.21
LETMD1-220ENST00000549686 PAIP1Q9H074 479 aaKnown RBP16.36■□□□□ 0.21
LETMD1-220ENST00000549686 NXT1Q9UKK6 140 aaKnown RBP16.36■□□□□ 0.21
LETMD1-220ENST00000549686 GMEB1Q9Y692 573 aa16.36■□□□□ 0.21
LETMD1-220ENST00000549686 TRBV5-3A0A0A0MS03 114 aa16.35■□□□□ 0.21
LETMD1-220ENST00000549686 FAM227AF5H4B4 570 aa16.35■□□□□ 0.21
LETMD1-220ENST00000549686 NVLO15381 856 aaKnown RBP16.35■□□□□ 0.21
LETMD1-220ENST00000549686 DNAJA2O60884 412 aa16.35■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms