RNA–Protein interactions for RNA: ENST00000547950.1

SCAF11-211, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 697 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-211ENST00000547950 MTHFD2P13995 350 aa6.22□□□□□ -1.41
SCAF11-211ENST00000547950 COX6B1P14854 86 aa6.22□□□□□ -1.41
SCAF11-211ENST00000547950 PTX3P26022 381 aaPredicted RBP6.22□□□□□ -1.41
SCAF11-211ENST00000547950 TYK2P29597 1187 aa6.22□□□□□ -1.41
SCAF11-211ENST00000547950 ARL1P40616 181 aaPredicted RBP6.22□□□□□ -1.41
SCAF11-211ENST00000547950 SOX3P41225 446 aa6.22□□□□□ -1.41
SCAF11-211ENST00000547950 NR0B1P51843 470 aaKnown RBP6.22□□□□□ -1.41
SCAF11-211ENST00000547950 NEK2P51955 445 aa6.22□□□□□ -1.41
SCAF11-211ENST00000547950 HK2P52789 917 aa6.22□□□□□ -1.41
SCAF11-211ENST00000547950 PPIAP62937 165 aaKnown RBP6.22□□□□□ -1.41
SCAF11-211ENST00000547950 RNF4P78317 190 aa6.22□□□□□ -1.41
SCAF11-211ENST00000547950 GUCY2DQ02846 1103 aa6.22□□□□□ -1.41
SCAF11-211ENST00000547950 SERTAD2Q14140 314 aa6.22□□□□□ -1.41
SCAF11-211ENST00000547950 CDSNQ15517 529 aa6.22□□□□□ -1.41
SCAF11-211ENST00000547950 CPSF6Q16630 551 aaKnown RBP eCLIP6.22□□□□□ -1.41
SCAF11-211ENST00000547950 FAM83EQ2M2I3 478 aa6.22□□□□□ -1.41
SCAF11-211ENST00000547950 KHDRBS2Q5VWX1 349 aaKnown RBP6.22□□□□□ -1.41
SCAF11-211ENST00000547950 C18orf63Q68DL7 685 aa6.22□□□□□ -1.41
SCAF11-211ENST00000547950 C8orf74Q6P047 294 aa6.22□□□□□ -1.41
SCAF11-211ENST00000547950 KLC3Q6P597 504 aa6.22□□□□□ -1.41
SCAF11-211ENST00000547950 CEP128Q6ZU80 1094 aa6.22□□□□□ -1.41
SCAF11-211ENST00000547950 FGD2Q7Z6J4 655 aa6.22□□□□□ -1.41
SCAF11-211ENST00000547950 TICAM1Q8IUC6 712 aa6.22□□□□□ -1.41
SCAF11-211ENST00000547950 CHERPQ8IWX8 916 aaKnown RBP6.22□□□□□ -1.41
SCAF11-211ENST00000547950 LAS2Q8IYD9 372 aa6.22□□□□□ -1.41
SCAF11-211ENST00000547950 CENPLQ8N0S6 344 aaPredicted RBP6.22□□□□□ -1.41
SCAF11-211ENST00000547950 POGLUT1Q8NBL1 392 aa6.22□□□□□ -1.41
SCAF11-211ENST00000547950 OR52N2Q8NGI0 321 aa6.22□□□□□ -1.41
SCAF11-211ENST00000547950 OR5L2Q8NGL0 311 aa6.22□□□□□ -1.41
SCAF11-211ENST00000547950 OR14A16Q8NHC5 309 aa6.22□□□□□ -1.41
SCAF11-211ENST00000547950 C16orf52Q8NHV5 167 aa6.22□□□□□ -1.41
SCAF11-211ENST00000547950 HUS1BQ8NHY5 278 aa6.22□□□□□ -1.41
SCAF11-211ENST00000547950 SLC2A12Q8TD20 617 aa6.22□□□□□ -1.41
SCAF11-211ENST00000547950 IFT81Q8WYA0 676 aa6.22□□□□□ -1.41
SCAF11-211ENST00000547950 RGMAQ96B86 450 aa6.22□□□□□ -1.41
SCAF11-211ENST00000547950 ANKRD9Q96BM1 317 aaPredicted RBP6.22□□□□□ -1.41
SCAF11-211ENST00000547950 SDCCAG3Q96C92 435 aa6.22□□□□□ -1.41
SCAF11-211ENST00000547950 MTFMTQ96DP5 389 aaKnown RBP6.22□□□□□ -1.41
SCAF11-211ENST00000547950 RBM18Q96H35 190 aaKnown RBP6.22□□□□□ -1.41
SCAF11-211ENST00000547950 SENP5Q96HI0 755 aaPredicted RBP6.22□□□□□ -1.41
SCAF11-211ENST00000547950 DGAT2Q96PD7 388 aa6.22□□□□□ -1.41
SCAF11-211ENST00000547950 CENPKQ9BS16 269 aa6.22□□□□□ -1.41
SCAF11-211ENST00000547950 VPS11Q9H270 941 aa6.22□□□□□ -1.41
SCAF11-211ENST00000547950 IPPKQ9H8X2 491 aa6.22□□□□□ -1.41
SCAF11-211ENST00000547950 SNX15Q9NRS6 342 aa6.22□□□□□ -1.41
SCAF11-211ENST00000547950 DEPPQ9NTK1 212 aa6.22□□□□□ -1.41
SCAF11-211ENST00000547950 CPSF2Q9P2I0 782 aaKnown RBP6.22□□□□□ -1.41
SCAF11-211ENST00000547950 HRH3Q9Y5N1 445 aa6.22□□□□□ -1.41
SCAF11-211ENST00000547950 ANKRD12Q6UB98 2062 aa6.22□□□□□ -1.41
SCAF11-211ENST00000547950 CELSR2Q9HCU4 2923 aa6.21□□□□□ -1.42
SCAF11-211ENST00000547950 GLOD5A6NK44 160 aa6.21□□□□□ -1.42
SCAF11-211ENST00000547950 E9PLN8 166 aa6.21□□□□□ -1.42
SCAF11-211ENST00000547950 C19orf84I3L1E1 186 aa6.21□□□□□ -1.42
SCAF11-211ENST00000547950 HRKO00198 91 aa6.21□□□□□ -1.42
SCAF11-211ENST00000547950 PLPP1O14494 284 aa6.21□□□□□ -1.42
SCAF11-211ENST00000547950 ADAM10O14672 748 aa6.21□□□□□ -1.42
SCAF11-211ENST00000547950 DYRK3O43781 588 aa6.21□□□□□ -1.42
SCAF11-211ENST00000547950 FGF17O60258 216 aa6.21□□□□□ -1.42
SCAF11-211ENST00000547950 SIX3O95343 332 aaPredicted RBP6.21□□□□□ -1.42
SCAF11-211ENST00000547950 CLDN14O95500 239 aa6.21□□□□□ -1.42
SCAF11-211ENST00000547950 COX7A2P14406 83 aa6.21□□□□□ -1.42
SCAF11-211ENST00000547950 AGAP20933 346 aa6.21□□□□□ -1.42
SCAF11-211ENST00000547950 CNR1P21554 472 aa6.21□□□□□ -1.42
SCAF11-211ENST00000547950 SERPINB1P30740 379 aa6.21□□□□□ -1.42
SCAF11-211ENST00000547950 TLX1P31314 330 aaPredicted RBP6.21□□□□□ -1.42
SCAF11-211ENST00000547950 PHBP35232 272 aa6.21□□□□□ -1.42
SCAF11-211ENST00000547950 PIK3CBP42338 1070 aa6.21□□□□□ -1.42
SCAF11-211ENST00000547950 KIR3DL1P43629 444 aa6.21□□□□□ -1.42
SCAF11-211ENST00000547950 STT3AP46977 705 aa6.21□□□□□ -1.42
SCAF11-211ENST00000547950 PIK3CGP48736 1102 aa6.21□□□□□ -1.42
SCAF11-211ENST00000547950 ALDH18A1P54886 795 aaKnown RBP6.21□□□□□ -1.42
SCAF11-211ENST00000547950 RPS13P62277 151 aaKnown RBP6.21□□□□□ -1.42
SCAF11-211ENST00000547950 FOLH1Q04609 750 aa6.21□□□□□ -1.42
SCAF11-211ENST00000547950 CKAP4Q07065 602 aaKnown RBP6.21□□□□□ -1.42
SCAF11-211ENST00000547950 PCDH1Q08174 1060 aa6.21□□□□□ -1.42
SCAF11-211ENST00000547950 ASPHQ12797 758 aa6.21□□□□□ -1.42
SCAF11-211ENST00000547950 GTF2H2Q13888 395 aa6.21□□□□□ -1.42
SCAF11-211ENST00000547950 E2F2Q14209 437 aa6.21□□□□□ -1.42
SCAF11-211ENST00000547950 ZNF267Q14586 743 aaPredicted RBP6.21□□□□□ -1.42
SCAF11-211ENST00000547950 SETDB1Q15047 1291 aa6.21□□□□□ -1.42
SCAF11-211ENST00000547950 ACAP2Q15057 778 aa6.21□□□□□ -1.42
SCAF11-211ENST00000547950 CMPK2Q5EBM0 449 aa6.21□□□□□ -1.42
SCAF11-211ENST00000547950 UBAP2Q5T6F2 1119 aaKnown RBP6.21□□□□□ -1.42
SCAF11-211ENST00000547950 LIPJQ5W064 366 aa6.21□□□□□ -1.42
SCAF11-211ENST00000547950 GRHL2Q6ISB3 625 aa6.21□□□□□ -1.42
SCAF11-211ENST00000547950 GTF2H2CQ6P1K8 395 aa6.21□□□□□ -1.42
SCAF11-211ENST00000547950 PAOXQ6QHF9 649 aa6.21□□□□□ -1.42
SCAF11-211ENST00000547950 DGAT2L6Q6ZPD8 337 aa6.21□□□□□ -1.42
SCAF11-211ENST00000547950 RTL4Q6ZR62 310 aa6.21□□□□□ -1.42
SCAF11-211ENST00000547950 CCDC91Q7Z6B0 441 aa6.21□□□□□ -1.42
SCAF11-211ENST00000547950 GPR180Q86V85 440 aa6.21□□□□□ -1.42
SCAF11-211ENST00000547950 CD163Q86VB7 1156 aa6.21□□□□□ -1.42
SCAF11-211ENST00000547950 GPALPP1Q8IXQ4 340 aa6.21□□□□□ -1.42
SCAF11-211ENST00000547950 PLD6Q8N2A8 252 aaKnown RBP6.21□□□□□ -1.42
SCAF11-211ENST00000547950 ZFP62Q8NB50 900 aaPredicted RBP6.21□□□□□ -1.42
SCAF11-211ENST00000547950 PSD4Q8NDX1 1056 aa6.21□□□□□ -1.42
SCAF11-211ENST00000547950 OR2M7Q8NG81 312 aa6.21□□□□□ -1.42
SCAF11-211ENST00000547950 RHEBL1Q8TAI7 183 aa6.21□□□□□ -1.42
SCAF11-211ENST00000547950 FAM57AQ8TBR7 257 aa6.21□□□□□ -1.42
SCAF11-211ENST00000547950 ZNF721Q8TF20 911 aa6.21□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms