RNA–Protein interactions for RNA: ENST00000540408.5

COPS7A-211, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 2

Gene COPS7A, Length 569 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-211ENST00000540408 FOXD4Q12950 439 aaPredicted RBP11.51□□□□□ -0.57
COPS7A-211ENST00000540408 SNTB1Q13884 538 aaKnown RBP11.51□□□□□ -0.57
COPS7A-211ENST00000540408 DOC2AQ14183 400 aa11.51□□□□□ -0.57
COPS7A-211ENST00000540408 ZNF460Q14592 562 aa11.51□□□□□ -0.57
COPS7A-211ENST00000540408 MORF4L2Q15014 288 aa11.51□□□□□ -0.57
COPS7A-211ENST00000540408 TMEM35AQ53FP2 167 aa11.51□□□□□ -0.57
COPS7A-211ENST00000540408 CDKL4Q5MAI5 379 aa11.51□□□□□ -0.57
COPS7A-211ENST00000540408 STEAP4Q687X5 459 aa11.51□□□□□ -0.57
COPS7A-211ENST00000540408 SULT1C3Q6IMI6 304 aa11.51□□□□□ -0.57
COPS7A-211ENST00000540408 SLC29A4Q7RTT9 530 aa11.51□□□□□ -0.57
COPS7A-211ENST00000540408 MAATS1Q7Z4T9 603 aa11.51□□□□□ -0.57
COPS7A-211ENST00000540408 CDC20BQ86Y33 519 aa11.51□□□□□ -0.57
COPS7A-211ENST00000540408 GPSM1Q86YR5 675 aa11.51□□□□□ -0.57
COPS7A-211ENST00000540408 ULK2Q8IYT8 1036 aa11.51□□□□□ -0.57
COPS7A-211ENST00000540408 MMP21Q8N119 569 aa11.51□□□□□ -0.57
COPS7A-211ENST00000540408 ACOT4Q8N9L9 421 aa11.51□□□□□ -0.57
COPS7A-211ENST00000540408 FAM13CQ8NE31 585 aa11.51□□□□□ -0.57
COPS7A-211ENST00000540408 NEIL3Q8TAT5 605 aa11.51□□□□□ -0.57
COPS7A-211ENST00000540408 PAQR8Q8TEZ7 354 aa11.51□□□□□ -0.57
COPS7A-211ENST00000540408 ZNF721Q8TF20 911 aa11.51□□□□□ -0.57
COPS7A-211ENST00000540408 ANKRD49Q8WVL7 239 aa11.51□□□□□ -0.57
COPS7A-211ENST00000540408 SLCO2A1Q92959 643 aa11.51□□□□□ -0.57
COPS7A-211ENST00000540408 RNASE6Q93091 150 aaKnown RBP11.51□□□□□ -0.57
COPS7A-211ENST00000540408 SPACA9Q96E40 222 aaPredicted RBP11.51□□□□□ -0.57
COPS7A-211ENST00000540408 SENP5Q96HI0 755 aaPredicted RBP11.51□□□□□ -0.57
COPS7A-211ENST00000540408 JSRP1Q96MG2 331 aaPredicted RBP11.51□□□□□ -0.57
COPS7A-211ENST00000540408 OSBPL9Q96SU4 736 aa11.51□□□□□ -0.57
COPS7A-211ENST00000540408 MAPKAP1Q9BPZ7 522 aa11.51□□□□□ -0.57
COPS7A-211ENST00000540408 PHACTR1Q9C0D0 580 aa11.51□□□□□ -0.57
COPS7A-211ENST00000540408 SEMA4BQ9NPR2 832 aaPredicted RBP11.51□□□□□ -0.57
COPS7A-211ENST00000540408 MS4A12Q9NXJ0 267 aa11.51□□□□□ -0.57
COPS7A-211ENST00000540408 SPRR3Q9UBC9 169 aa11.51□□□□□ -0.57
COPS7A-211ENST00000540408 ZNF629Q9UEG4 869 aaPredicted RBP11.51□□□□□ -0.57
COPS7A-211ENST00000540408 ZNF490Q9ULM2 529 aaPredicted RBP11.51□□□□□ -0.57
COPS7A-211ENST00000540408 TEX264Q9Y6I9 313 aa11.51□□□□□ -0.57
COPS7A-211ENST00000540408 PRRC2AP48634 2157 aaKnown RBP11.51□□□□□ -0.57
COPS7A-211ENST00000540408 ITPR3Q14573 2671 aa11.51□□□□□ -0.57
COPS7A-211ENST00000540408 ZNF354AO60765 605 aaPredicted RBP11.5□□□□□ -0.57
COPS7A-211ENST00000540408 TBX6O95947 436 aaPredicted RBP11.5□□□□□ -0.57
COPS7A-211ENST00000540408 IL2RAP01589 272 aa11.5□□□□□ -0.57
COPS7A-211ENST00000540408 S100BP04271 92 aaPredicted RBP11.5□□□□□ -0.57
COPS7A-211ENST00000540408 ATP5A1P25705 553 aaKnown RBP11.5□□□□□ -0.57
COPS7A-211ENST00000540408 TLX1P31314 330 aaPredicted RBP11.5□□□□□ -0.57
COPS7A-211ENST00000540408 RPL21P46778 160 aaKnown RBP11.5□□□□□ -0.57
COPS7A-211ENST00000540408 STT3AP46977 705 aa11.5□□□□□ -0.57
COPS7A-211ENST00000540408 HSPA7P48741 367 aa11.5□□□□□ -0.57
COPS7A-211ENST00000540408 ARL4CP56559 192 aa11.5□□□□□ -0.57
COPS7A-211ENST00000540408 PLIN5Q00G26 463 aa11.5□□□□□ -0.57
COPS7A-211ENST00000540408 ID2Q02363 134 aa11.5□□□□□ -0.57
COPS7A-211ENST00000540408 IRF8Q02556 426 aa11.5□□□□□ -0.57
COPS7A-211ENST00000540408 KEAP1Q14145 624 aa11.5□□□□□ -0.57
COPS7A-211ENST00000540408 PDK4Q16654 411 aa11.5□□□□□ -0.57
COPS7A-211ENST00000540408 ZNF791Q3KP31 576 aaPredicted RBP11.5□□□□□ -0.57
COPS7A-211ENST00000540408 PRAMEF20Q5VT98 475 aa11.5□□□□□ -0.57
COPS7A-211ENST00000540408 TMEM198Q66K66 360 aa11.5□□□□□ -0.57
COPS7A-211ENST00000540408 VN1R5Q7Z5H4 357 aa11.5□□□□□ -0.57
COPS7A-211ENST00000540408 KIF18BQ86Y91 864 aa11.5□□□□□ -0.57
COPS7A-211ENST00000540408 PM20D2Q8IYS1 436 aa11.5□□□□□ -0.57
COPS7A-211ENST00000540408 TANKQ92844 425 aa11.5□□□□□ -0.57
COPS7A-211ENST00000540408 ANKRD9Q96BM1 317 aaPredicted RBP11.5□□□□□ -0.57
COPS7A-211ENST00000540408 MBD6Q96DN6 1003 aa11.5□□□□□ -0.57
COPS7A-211ENST00000540408 WDR34Q96EX3 536 aa11.5□□□□□ -0.57
COPS7A-211ENST00000540408 TSPAN17Q96FV3 270 aa11.5□□□□□ -0.57
COPS7A-211ENST00000540408 CENPKQ9BS16 269 aa11.5□□□□□ -0.57
COPS7A-211ENST00000540408 DERL2Q9GZP9 239 aa11.5□□□□□ -0.57
COPS7A-211ENST00000540408 RPF2Q9H7B2 306 aaKnown RBP11.5□□□□□ -0.57
COPS7A-211ENST00000540408 ZNF703Q9H7S9 590 aaPredicted RBP11.5□□□□□ -0.57
COPS7A-211ENST00000540408 PLAC1Q9HBJ0 212 aa11.5□□□□□ -0.57
COPS7A-211ENST00000540408 CD274Q9NZQ7 290 aa11.5□□□□□ -0.57
COPS7A-211ENST00000540408 TXNDC16Q9P2K2 825 aa11.5□□□□□ -0.57
COPS7A-211ENST00000540408 PSAT1Q9Y617 370 aa11.5□□□□□ -0.57
COPS7A-211ENST00000540408 C15orf38-AP3S2A0A0A6YYH1 394 aa11.49□□□□□ -0.57
COPS7A-211ENST00000540408 TUBAL3A6NHL2 446 aa11.49□□□□□ -0.57
COPS7A-211ENST00000540408 CAPN14A8MX76 684 aa11.49□□□□□ -0.57
COPS7A-211ENST00000540408 CES2O00748 559 aa11.49□□□□□ -0.57
COPS7A-211ENST00000540408 TP53I11O14683 189 aa11.49□□□□□ -0.57
COPS7A-211ENST00000540408 TAPBPO15533 448 aa11.49□□□□□ -0.57
COPS7A-211ENST00000540408 CCNT2O60583 730 aaKnown RBP11.49□□□□□ -0.57
COPS7A-211ENST00000540408 EPPINO95925 133 aa11.49□□□□□ -0.57
COPS7A-211ENST00000540408 TGFB1P01137 390 aa11.49□□□□□ -0.57
COPS7A-211ENST00000540408 RAF1P04049 648 aa11.49□□□□□ -0.57
COPS7A-211ENST00000540408 RFPL3SP0C7P2 107 aa11.49□□□□□ -0.57
COPS7A-211ENST00000540408 CCDC166P0CW27 439 aa11.49□□□□□ -0.57
COPS7A-211ENST00000540408 PCNAP12004 261 aa11.49□□□□□ -0.57
COPS7A-211ENST00000540408 HIST1H1TP22492 207 aaPredicted RBP11.49□□□□□ -0.57
COPS7A-211ENST00000540408 SERPINB1P30740 379 aa11.49□□□□□ -0.57
COPS7A-211ENST00000540408 TIMP3P35625 211 aa11.49□□□□□ -0.57
COPS7A-211ENST00000540408 SSR2P43308 183 aa11.49□□□□□ -0.57
COPS7A-211ENST00000540408 TRPC1P48995 793 aa11.49□□□□□ -0.57
COPS7A-211ENST00000540408 ADAM8P78325 824 aa11.49□□□□□ -0.57
COPS7A-211ENST00000540408 POU4F1Q01851 419 aa11.49□□□□□ -0.57
COPS7A-211ENST00000540408 CHIT1Q13231 466 aa11.49□□□□□ -0.57
COPS7A-211ENST00000540408 SLAMF1Q13291 335 aa11.49□□□□□ -0.57
COPS7A-211ENST00000540408 DAZAP2Q15038 168 aaPredicted RBP11.49□□□□□ -0.57
COPS7A-211ENST00000540408 TBCCQ15814 346 aa11.49□□□□□ -0.57
COPS7A-211ENST00000540408 TBCELQ5QJ74 424 aa11.49□□□□□ -0.57
COPS7A-211ENST00000540408 SYDE1Q6ZW31 735 aaPredicted RBP11.49□□□□□ -0.57
COPS7A-211ENST00000540408 LACC1Q8IV20 430 aa11.49□□□□□ -0.57
COPS7A-211ENST00000540408 ANKMY2Q8IV38 441 aa11.49□□□□□ -0.57
COPS7A-211ENST00000540408 OR4N5Q8IXE1 308 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms