RNA–Protein interactions for RNA: ENST00000538021.5

CLPB-208, Transcript of ClpB homolog, mitochondrial AAA ATPase chaperonin, humanhuman

TSL 1 (best)

Gene CLPB, Length 1,108 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPB-208ENST00000538021 ZNF597Q96LX8 424 aa10.2□□□□□ -0.78
CLPB-208ENST00000538021 DOCK7Q96N67 2140 aa10.2□□□□□ -0.78
CLPB-208ENST00000538021 SFXN3Q9BWM7 321 aa10.2□□□□□ -0.78
CLPB-208ENST00000538021 UGT2B28Q9BY64 529 aa10.2□□□□□ -0.78
CLPB-208ENST00000538021 KLHL28Q9NXS3 571 aa10.2□□□□□ -0.78
CLPB-208ENST00000538021 ZNF226Q9NYT6 803 aa10.2□□□□□ -0.78
CLPB-208ENST00000538021 MAD1L1Q9Y6D9 718 aa10.2□□□□□ -0.78
CLPB-208ENST00000538021 COMMD10Q9Y6G5 202 aa10.2□□□□□ -0.78
CLPB-208ENST00000538021 A0A088AWK7 358 aa10.19□□□□□ -0.78
CLPB-208ENST00000538021 MIF4GDA9UHW6 222 aaKnown RBP10.19□□□□□ -0.78
CLPB-208ENST00000538021 RNF223E7ERA6 249 aa10.19□□□□□ -0.78
CLPB-208ENST00000538021 CYR61O00622 381 aa10.19□□□□□ -0.78
CLPB-208ENST00000538021 LDB3O75112 727 aa10.19□□□□□ -0.78
CLPB-208ENST00000538021 HAUS5O94927 633 aa10.19□□□□□ -0.78
CLPB-208ENST00000538021 ETHE1O95571 254 aa10.19□□□□□ -0.78
CLPB-208ENST00000538021 FTCDO95954 541 aa10.19□□□□□ -0.78
CLPB-208ENST00000538021 CYP4B1P13584 511 aa10.19□□□□□ -0.78
CLPB-208ENST00000538021 ZNF10P21506 573 aaPredicted RBP10.19□□□□□ -0.78
CLPB-208ENST00000538021 HNRNPH1P31943 449 aaKnown RBP10.19□□□□□ -0.78
CLPB-208ENST00000538021 SLC1A2P43004 574 aa10.19□□□□□ -0.78
CLPB-208ENST00000538021 MSH2P43246 934 aa10.19□□□□□ -0.78
CLPB-208ENST00000538021 RPL21P46778 160 aaKnown RBP10.19□□□□□ -0.78
CLPB-208ENST00000538021 PLA2G16P53816 162 aa10.19□□□□□ -0.78
CLPB-208ENST00000538021 DIO3P55073 304 aa10.19□□□□□ -0.78
CLPB-208ENST00000538021 LIM2P55344 173 aa10.19□□□□□ -0.78
CLPB-208ENST00000538021 ID2Q02363 134 aa10.19□□□□□ -0.78
CLPB-208ENST00000538021 DCST1Q5T197 706 aa10.19□□□□□ -0.78
CLPB-208ENST00000538021 NXPE4Q6UWF7 544 aa10.19□□□□□ -0.78
CLPB-208ENST00000538021 LYPD8Q6UX82 237 aa10.19□□□□□ -0.78
CLPB-208ENST00000538021 KLHDC8AQ8IYD2 350 aa10.19□□□□□ -0.78
CLPB-208ENST00000538021 CCDC170Q8IYT3 715 aa10.19□□□□□ -0.78
CLPB-208ENST00000538021 MEIOBQ8N635 442 aa10.19□□□□□ -0.78
CLPB-208ENST00000538021 NUBPLQ8TB37 319 aa10.19□□□□□ -0.78
CLPB-208ENST00000538021 ZNF721Q8TF20 911 aa10.19□□□□□ -0.78
CLPB-208ENST00000538021 SLC44A1Q8WWI5 657 aa10.19□□□□□ -0.78
CLPB-208ENST00000538021 DIO2Q92813 273 aa10.19□□□□□ -0.78
CLPB-208ENST00000538021 ABTB1Q969K4 478 aaPredicted RBP10.19□□□□□ -0.78
CLPB-208ENST00000538021 ZNF669Q96BR6 464 aaPredicted RBP10.19□□□□□ -0.78
CLPB-208ENST00000538021 INTS12Q96CB8 462 aaKnown RBP10.19□□□□□ -0.78
CLPB-208ENST00000538021 MS4A6EQ96DS6 147 aa10.19□□□□□ -0.78
CLPB-208ENST00000538021 LINGO1Q96FE5 620 aa10.19□□□□□ -0.78
CLPB-208ENST00000538021 WFIKKN1Q96NZ8 548 aa10.19□□□□□ -0.78
CLPB-208ENST00000538021 GAL3ST4Q96RP7 486 aa10.19□□□□□ -0.78
CLPB-208ENST00000538021 NDNQ99608 321 aa10.19□□□□□ -0.78
CLPB-208ENST00000538021 TRIM54Q9BYV2 358 aa10.19□□□□□ -0.78
CLPB-208ENST00000538021 FRMD8P1Q9BZ68 369 aaPredicted RBP10.19□□□□□ -0.78
CLPB-208ENST00000538021 PELI2Q9HAT8 420 aa10.19□□□□□ -0.78
CLPB-208ENST00000538021 YAE1D1Q9NRH1 226 aa10.19□□□□□ -0.78
CLPB-208ENST00000538021 ADGRE2Q9UHX3 823 aa10.19□□□□□ -0.78
CLPB-208ENST00000538021 CNOT11Q9UKZ1 510 aaKnown RBP10.19□□□□□ -0.78
CLPB-208ENST00000538021 CHCHD2Q9Y6H1 151 aaPredicted RBP10.19□□□□□ -0.78
CLPB-208ENST00000538021 A0A087X1B8 175 aa10.18□□□□□ -0.78
CLPB-208ENST00000538021 TCRBV7S3A2A0A539 114 aa10.18□□□□□ -0.78
CLPB-208ENST00000538021 BTNL10A8MVZ5 291 aa10.18□□□□□ -0.78
CLPB-208ENST00000538021 HPNP05981 417 aa10.18□□□□□ -0.78
CLPB-208ENST00000538021 CERS1P27544 350 aa10.18□□□□□ -0.78
CLPB-208ENST00000538021 SERPINB3P29508 390 aa10.18□□□□□ -0.78
CLPB-208ENST00000538021 MC3RP41968 323 aa10.18□□□□□ -0.78
CLPB-208ENST00000538021 SLCO1A2P46721 670 aa10.18□□□□□ -0.78
CLPB-208ENST00000538021 MASP1P48740 699 aa10.18□□□□□ -0.78
CLPB-208ENST00000538021 CDK9P50750 372 aaKnown RBP10.18□□□□□ -0.78
CLPB-208ENST00000538021 ATP5J2P56134 94 aa10.18□□□□□ -0.78
CLPB-208ENST00000538021 FAM27E3Q08E93 113 aa10.18□□□□□ -0.78
CLPB-208ENST00000538021 VEZF1Q14119 521 aa10.18□□□□□ -0.78
CLPB-208ENST00000538021 SERTAD2Q14140 314 aa10.18□□□□□ -0.78
CLPB-208ENST00000538021 RCN2Q14257 317 aa10.18□□□□□ -0.78
CLPB-208ENST00000538021 EFTUD2Q15029 972 aaKnown RBP eCLIP10.18□□□□□ -0.78
CLPB-208ENST00000538021 KCTD19Q17RG1 926 aaPredicted RBP10.18□□□□□ -0.78
CLPB-208ENST00000538021 EIPR1Q53HC9 387 aa10.18□□□□□ -0.78
CLPB-208ENST00000538021 WIPI1Q5MNZ9 446 aaPredicted RBP10.18□□□□□ -0.78
CLPB-208ENST00000538021 PAQR3Q6TCH7 311 aa10.18□□□□□ -0.78
CLPB-208ENST00000538021 PLXDC2Q6UX71 529 aa10.18□□□□□ -0.78
CLPB-208ENST00000538021 PLEKHM3Q6ZWE6 761 aa10.18□□□□□ -0.78
CLPB-208ENST00000538021 HIPK1Q86Z02 1210 aa10.18□□□□□ -0.78
CLPB-208ENST00000538021 C9orf40Q8IXQ3 194 aa10.18□□□□□ -0.78
CLPB-208ENST00000538021 GCNT2Q8N0V5 402 aa10.18□□□□□ -0.78
CLPB-208ENST00000538021 SLC15A4Q8N697 577 aa10.18□□□□□ -0.78
CLPB-208ENST00000538021 GPATCH11Q8N954 259 aa10.18□□□□□ -0.78
CLPB-208ENST00000538021 TMEM171Q8WVE6 324 aa10.18□□□□□ -0.78
CLPB-208ENST00000538021 ATL1Q8WXF7 558 aa10.18□□□□□ -0.78
CLPB-208ENST00000538021 NTNG2Q96CW9 530 aa10.18□□□□□ -0.78
CLPB-208ENST00000538021 ZC3HAV1LQ96H79 300 aaKnown RBP10.18□□□□□ -0.78
CLPB-208ENST00000538021 SENP5Q96HI0 755 aaPredicted RBP10.18□□□□□ -0.78
CLPB-208ENST00000538021 GNRHR2Q96P88 292 aa10.18□□□□□ -0.78
CLPB-208ENST00000538021 PIGQQ9BRB3 760 aa10.18□□□□□ -0.78
CLPB-208ENST00000538021 MED18Q9BUE0 208 aa10.18□□□□□ -0.78
CLPB-208ENST00000538021 LACRTQ9GZZ8 138 aa10.18□□□□□ -0.78
CLPB-208ENST00000538021 RBSNQ9H1K0 784 aa10.18□□□□□ -0.78
CLPB-208ENST00000538021 PIGMQ9H3S5 423 aa10.18□□□□□ -0.78
CLPB-208ENST00000538021 COPS7BQ9H9Q2 264 aaPredicted RBP10.18□□□□□ -0.78
CLPB-208ENST00000538021 DAPP1Q9UN19 280 aa10.18□□□□□ -0.78
CLPB-208ENST00000538021 USF3Q68DE3 2245 aa10.17□□□□□ -0.78
CLPB-208ENST00000538021 LRIT2A6NDA9 550 aa10.17□□□□□ -0.78
CLPB-208ENST00000538021 A8MXE2 369 aa10.17□□□□□ -0.78
CLPB-208ENST00000538021 TRIM3O75382 744 aaPredicted RBP10.17□□□□□ -0.78
CLPB-208ENST00000538021 RCBTB2O95199 551 aa10.17□□□□□ -0.78
CLPB-208ENST00000538021 IPO7O95373 1038 aaKnown RBP10.17□□□□□ -0.78
CLPB-208ENST00000538021 FBXO45P0C2W1 286 aa10.17□□□□□ -0.78
CLPB-208ENST00000538021 COX7A2P14406 83 aa10.17□□□□□ -0.78
CLPB-208ENST00000538021 CRYGSP22914 178 aa10.17□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms