RNA–Protein interactions for RNA: ENST00000533123.5

SMPD1-208, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene SMPD1, Length 2,211 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-208ENST00000533123 PAGE2Q7Z2X7 111 aa17.48■□□□□ 0.39
SMPD1-208ENST00000533123 ADGRG5Q8IZF4 528 aa17.48■□□□□ 0.39
SMPD1-208ENST00000533123 TMEM102Q8N9M5 508 aaPredicted RBP17.48■□□□□ 0.39
SMPD1-208ENST00000533123 CCDC115Q96NT0 180 aa17.48■□□□□ 0.39
SMPD1-208ENST00000533123 PRPF18Q99633 342 aaKnown RBP17.48■□□□□ 0.39
SMPD1-208ENST00000533123 ZNF184Q99676 751 aaPredicted RBP17.48■□□□□ 0.39
SMPD1-208ENST00000533123 DDX31Q9H8H2 851 aaKnown RBP17.48■□□□□ 0.39
SMPD1-208ENST00000533123 PAPOLBQ9NRJ5 636 aaKnown RBP17.48■□□□□ 0.39
SMPD1-208ENST00000533123 SEC16AO15027 2179 aa17.48■□□□□ 0.39
SMPD1-208ENST00000533123 OR2B3O76000 313 aa17.48■□□□□ 0.39
SMPD1-208ENST00000533123 SMIM10L1P0DMW3 83 aa17.48■□□□□ 0.39
SMPD1-208ENST00000533123 GGT1P19440 569 aa17.48■□□□□ 0.39
SMPD1-208ENST00000533123 HIST1H1TP22492 207 aaPredicted RBP17.48■□□□□ 0.39
SMPD1-208ENST00000533123 TRPC1P48995 793 aa17.48■□□□□ 0.39
SMPD1-208ENST00000533123 MAPK12P53778 367 aa17.48■□□□□ 0.39
SMPD1-208ENST00000533123 PDE7AQ13946 482 aa17.48■□□□□ 0.39
SMPD1-208ENST00000533123 MPEG1Q2M385 716 aa17.48■□□□□ 0.39
SMPD1-208ENST00000533123 GRAMD1BQ3KR37 738 aa17.48■□□□□ 0.39
SMPD1-208ENST00000533123 SFT2D3Q587I9 215 aa17.48■□□□□ 0.39
SMPD1-208ENST00000533123 OGFRL1Q5TC84 451 aaPredicted RBP17.48■□□□□ 0.39
SMPD1-208ENST00000533123 ABHD13Q7L211 337 aa17.48■□□□□ 0.39
SMPD1-208ENST00000533123 ACOT4Q8N9L9 421 aa17.48■□□□□ 0.39
SMPD1-208ENST00000533123 OR1L3Q8NH93 324 aa17.48■□□□□ 0.39
SMPD1-208ENST00000533123 FIG4Q92562 907 aa17.48■□□□□ 0.39
SMPD1-208ENST00000533123 PPCDCQ96CD2 204 aa17.48■□□□□ 0.39
SMPD1-208ENST00000533123 SMIM10Q96HG1 83 aa17.48■□□□□ 0.39
SMPD1-208ENST00000533123 VCXQ9H320 206 aa17.48■□□□□ 0.39
SMPD1-208ENST00000533123 CCM2LQ9NUG4 571 aaPredicted RBP17.48■□□□□ 0.39
SMPD1-208ENST00000533123 MAGEL2Q9UJ55 1249 aa17.48■□□□□ 0.39
SMPD1-208ENST00000533123 KNTC1P50748 2209 aa17.48■□□□□ 0.39
SMPD1-208ENST00000533123 ADAMTS20P59510 1910 aa17.47■□□□□ 0.39
SMPD1-208ENST00000533123 TXNDC9O14530 226 aa17.47■□□□□ 0.39
SMPD1-208ENST00000533123 TMPRSS11DO60235 418 aa17.47■□□□□ 0.39
SMPD1-208ENST00000533123 ALOX12P18054 663 aa17.47■□□□□ 0.39
SMPD1-208ENST00000533123 IL1RNP18510 177 aa17.47■□□□□ 0.39
SMPD1-208ENST00000533123 ATP5A1P25705 553 aaKnown RBP17.47■□□□□ 0.39
SMPD1-208ENST00000533123 PSMA4P25789 261 aaKnown RBP17.47■□□□□ 0.39
SMPD1-208ENST00000533123 CERS1P27544 350 aa17.47■□□□□ 0.39
SMPD1-208ENST00000533123 GZMMP51124 257 aa17.47■□□□□ 0.39
SMPD1-208ENST00000533123 TGM3Q08188 693 aa17.47■□□□□ 0.39
SMPD1-208ENST00000533123 ILKQ13418 452 aa17.47■□□□□ 0.39
SMPD1-208ENST00000533123 C16orf72Q14CZ0 275 aa17.47■□□□□ 0.39
SMPD1-208ENST00000533123 TCTE1Q5JU00 501 aa17.47■□□□□ 0.39
SMPD1-208ENST00000533123 PROSER1Q86XN7 944 aa17.47■□□□□ 0.39
SMPD1-208ENST00000533123 ARHGEF39Q8N4T4 335 aa17.47■□□□□ 0.39
SMPD1-208ENST00000533123 PNPT1Q8TCS8 783 aaKnown RBP17.47■□□□□ 0.39
SMPD1-208ENST00000533123 ZNF501Q96CX3 271 aaPredicted RBP17.47■□□□□ 0.39
SMPD1-208ENST00000533123 KLHL4Q9C0H6 718 aa17.47■□□□□ 0.39
SMPD1-208ENST00000533123 MAPRE3Q9UPY8 281 aa17.47■□□□□ 0.39
SMPD1-208ENST00000533123 H3BMH7 237 aa17.47■□□□□ 0.39
SMPD1-208ENST00000533123 TPST1O60507 370 aa17.47■□□□□ 0.39
SMPD1-208ENST00000533123 MED26O95402 600 aa17.47■□□□□ 0.39
SMPD1-208ENST00000533123 ABCB1P08183 1280 aaPredicted RBP17.47■□□□□ 0.39
SMPD1-208ENST00000533123 MSL3P1P0C860 447 aa17.47■□□□□ 0.39
SMPD1-208ENST00000533123 E2F1Q01094 437 aa17.47■□□□□ 0.39
SMPD1-208ENST00000533123 INSM1Q01101 510 aaPredicted RBP17.47■□□□□ 0.39
SMPD1-208ENST00000533123 GAB1Q13480 694 aa17.47■□□□□ 0.39
SMPD1-208ENST00000533123 KIF26BQ2KJY2 2108 aa17.47■□□□□ 0.39
SMPD1-208ENST00000533123 TBCELQ5QJ74 424 aa17.47■□□□□ 0.39
SMPD1-208ENST00000533123 PRAMEF17Q5VTA0 474 aa17.47■□□□□ 0.39
SMPD1-208ENST00000533123 RNF220Q5VTB9 566 aa17.47■□□□□ 0.39
SMPD1-208ENST00000533123 HMBOX1Q6NT76 420 aa17.47■□□□□ 0.39
SMPD1-208ENST00000533123 RBM44Q6ZP01 1051 aaKnown RBP17.47■□□□□ 0.39
SMPD1-208ENST00000533123 CALHM3Q86XJ0 350 aa17.47■□□□□ 0.39
SMPD1-208ENST00000533123 QRFPRQ96P65 431 aa17.47■□□□□ 0.39
SMPD1-208ENST00000533123 OR6C1Q96RD1 312 aa17.47■□□□□ 0.39
SMPD1-208ENST00000533123 BHLHE41Q9C0J9 482 aaPredicted RBP17.47■□□□□ 0.39
SMPD1-208ENST00000533123 BTNL2Q9UIR0 455 aa17.47■□□□□ 0.39
SMPD1-208ENST00000533123 ADAM29Q9UKF5 820 aa17.47■□□□□ 0.39
SMPD1-208ENST00000533123 A0A0A6YYD5 115 aa17.46■□□□□ 0.39
SMPD1-208ENST00000533123 HYKKA2RU49 373 aa17.46■□□□□ 0.39
SMPD1-208ENST00000533123 CLIC1O00299 241 aa17.46■□□□□ 0.39
SMPD1-208ENST00000533123 HYAL3O43820 417 aaPredicted RBP17.46■□□□□ 0.39
SMPD1-208ENST00000533123 CSTF2P33240 577 aaKnown RBP eCLIP17.46■□□□□ 0.39
SMPD1-208ENST00000533123 HNRNPFP52597 415 aaKnown RBP17.46■□□□□ 0.39
SMPD1-208ENST00000533123 ARFIP1P53367 373 aa17.46■□□□□ 0.39
SMPD1-208ENST00000533123 LIMK1P53667 647 aa17.46■□□□□ 0.39
SMPD1-208ENST00000533123 AQP4P55087 323 aa17.46■□□□□ 0.39
SMPD1-208ENST00000533123 SLAMF1Q13291 335 aa17.46■□□□□ 0.39
SMPD1-208ENST00000533123 AMIGO2Q86SJ2 522 aa17.46■□□□□ 0.39
SMPD1-208ENST00000533123 PDSS2Q86YH6 399 aa17.46■□□□□ 0.39
SMPD1-208ENST00000533123 TICAM1Q8IUC6 712 aa17.46■□□□□ 0.39
SMPD1-208ENST00000533123 OR4A15Q8NGL6 344 aa17.46■□□□□ 0.39
SMPD1-208ENST00000533123 FAM120BQ96EK7 910 aaKnown RBP17.46■□□□□ 0.39
SMPD1-208ENST00000533123 C10orf90Q96M02 699 aa17.46■□□□□ 0.39
SMPD1-208ENST00000533123 NSMCE2Q96MF7 247 aa17.46■□□□□ 0.39
SMPD1-208ENST00000533123 ARMC1Q9NVT9 282 aa17.46■□□□□ 0.39
SMPD1-208ENST00000533123 OCIAD1Q9NX40 245 aa17.46■□□□□ 0.39
SMPD1-208ENST00000533123 SLC22A7Q9Y694 548 aa17.46■□□□□ 0.39
SMPD1-208ENST00000533123 ELOVL7A1L3X0 281 aa17.45■□□□□ 0.38
SMPD1-208ENST00000533123 ZNF860A6NHJ4 632 aa17.45■□□□□ 0.38
SMPD1-208ENST00000533123 FAM220BPB1ANY3 271 aa17.45■□□□□ 0.38
SMPD1-208ENST00000533123 RNASET2O00584 256 aaKnown RBP17.45■□□□□ 0.38
SMPD1-208ENST00000533123 GSTA4O15217 222 aa17.45■□□□□ 0.38
SMPD1-208ENST00000533123 DNAJB6O75190 326 aa17.45■□□□□ 0.38
SMPD1-208ENST00000533123 C6orf47O95873 294 aa17.45■□□□□ 0.38
SMPD1-208ENST00000533123 TSFMP43897 325 aaKnown RBP17.45■□□□□ 0.38
SMPD1-208ENST00000533123 TRA2AQ13595 282 aaKnown RBP eCLIP17.45■□□□□ 0.38
SMPD1-208ENST00000533123 ANXA8L1Q5VT79 327 aa17.45■□□□□ 0.38
SMPD1-208ENST00000533123 DHRS13Q6UX07 377 aa17.45■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms