RNA–Protein interactions for RNA: ENST00000529553.1

AMBRA1-207, Transcript of autophagy and beclin 1 regulator 1, humanhuman

TSL 3

Gene AMBRA1, Length 586 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1-207ENST00000529553 RUNX1T1Q06455 604 aa10.62□□□□□ -0.71
AMBRA1-207ENST00000529553 CLEC12BQ2HXU8 276 aa10.62□□□□□ -0.71
AMBRA1-207ENST00000529553 KRTAP24-1Q3LI83 254 aa10.62□□□□□ -0.71
AMBRA1-207ENST00000529553 TOR1AIP1Q5JTV8 583 aa10.62□□□□□ -0.71
AMBRA1-207ENST00000529553 UGT3A1Q6NUS8 523 aa10.62□□□□□ -0.71
AMBRA1-207ENST00000529553 CASC4Q6P4E1 433 aa10.62□□□□□ -0.71
AMBRA1-207ENST00000529553 CES3Q6UWW8 571 aa10.62□□□□□ -0.71
AMBRA1-207ENST00000529553 C4orf22Q6V702 233 aa10.62□□□□□ -0.71
AMBRA1-207ENST00000529553 ADGRE4PQ86SQ3 457 aa10.62□□□□□ -0.71
AMBRA1-207ENST00000529553 CPNE9Q8IYJ1 553 aa10.62□□□□□ -0.71
AMBRA1-207ENST00000529553 ZNF721Q8TF20 911 aa10.62□□□□□ -0.71
AMBRA1-207ENST00000529553 ATL1Q8WXF7 558 aa10.62□□□□□ -0.71
AMBRA1-207ENST00000529553 NEIL2Q969S2 332 aa10.62□□□□□ -0.71
AMBRA1-207ENST00000529553 ZNF597Q96LX8 424 aa10.62□□□□□ -0.71
AMBRA1-207ENST00000529553 GBP4Q96PP9 640 aa10.62□□□□□ -0.71
AMBRA1-207ENST00000529553 GPR21Q99679 349 aa10.62□□□□□ -0.71
AMBRA1-207ENST00000529553 AIF1LQ9BQI0 150 aa10.62□□□□□ -0.71
AMBRA1-207ENST00000529553 TSGA10Q9BZW7 698 aa10.62□□□□□ -0.71
AMBRA1-207ENST00000529553 AICDAQ9GZX7 198 aa10.62□□□□□ -0.71
AMBRA1-207ENST00000529553 SPNS1Q9H2V7 528 aa10.62□□□□□ -0.71
AMBRA1-207ENST00000529553 PACSIN3Q9UKS6 424 aa10.62□□□□□ -0.71
AMBRA1-207ENST00000529553 MAD1L1Q9Y6D9 718 aa10.62□□□□□ -0.71
AMBRA1-207ENST00000529553 CTAGE9A4FU28 777 aa10.61□□□□□ -0.71
AMBRA1-207ENST00000529553 BTNL10A8MVZ5 291 aa10.61□□□□□ -0.71
AMBRA1-207ENST00000529553 C4orf51C9J302 202 aa10.61□□□□□ -0.71
AMBRA1-207ENST00000529553 CHMP24386 653 aa10.61□□□□□ -0.71
AMBRA1-207ENST00000529553 GSTM2P28161 218 aa10.61□□□□□ -0.71
AMBRA1-207ENST00000529553 LOXP28300 417 aaPredicted RBP10.61□□□□□ -0.71
AMBRA1-207ENST00000529553 HPDP32754 393 aaPredicted RBP10.61□□□□□ -0.71
AMBRA1-207ENST00000529553 IDUAP35475 653 aa10.61□□□□□ -0.71
AMBRA1-207ENST00000529553 CD79BP40259 229 aa10.61□□□□□ -0.71
AMBRA1-207ENST00000529553 RGS4P49798 205 aa10.61□□□□□ -0.71
AMBRA1-207ENST00000529553 AP1S2P56377 157 aa10.61□□□□□ -0.71
AMBRA1-207ENST00000529553 DHX9Q08211 1270 aaKnown RBP10.61□□□□□ -0.71
AMBRA1-207ENST00000529553 FAM27E3Q08E93 113 aa10.61□□□□□ -0.71
AMBRA1-207ENST00000529553 BIKQ13323 160 aa10.61□□□□□ -0.71
AMBRA1-207ENST00000529553 RBBP5Q15291 538 aaKnown RBP10.61□□□□□ -0.71
AMBRA1-207ENST00000529553 NTRK2Q16620 822 aa10.61□□□□□ -0.71
AMBRA1-207ENST00000529553 MBOAT1Q6ZNC8 495 aa10.61□□□□□ -0.71
AMBRA1-207ENST00000529553 SH2D5Q6ZV89 423 aa10.61□□□□□ -0.71
AMBRA1-207ENST00000529553 CLNKQ7Z7G1 428 aa10.61□□□□□ -0.71
AMBRA1-207ENST00000529553 TTLQ8NG68 377 aa10.61□□□□□ -0.71
AMBRA1-207ENST00000529553 OR10G3Q8NGC4 313 aa10.61□□□□□ -0.71
AMBRA1-207ENST00000529553 EEF1AKMT1Q8WVE0 214 aa10.61□□□□□ -0.71
AMBRA1-207ENST00000529553 PYCR2Q96C36 320 aa10.61□□□□□ -0.71
AMBRA1-207ENST00000529553 SENP5Q96HI0 755 aaPredicted RBP10.61□□□□□ -0.71
AMBRA1-207ENST00000529553 QRFPRQ96P65 431 aa10.61□□□□□ -0.71
AMBRA1-207ENST00000529553 SERINC2Q96SA4 455 aa10.61□□□□□ -0.71
AMBRA1-207ENST00000529553 MED18Q9BUE0 208 aa10.61□□□□□ -0.71
AMBRA1-207ENST00000529553 KLHL28Q9NXS3 571 aa10.61□□□□□ -0.71
AMBRA1-207ENST00000529553 ELOVL5Q9NYP7 299 aa10.61□□□□□ -0.71
AMBRA1-207ENST00000529553 DAPP1Q9UN19 280 aa10.61□□□□□ -0.71
AMBRA1-207ENST00000529553 SLC6A5Q9Y345 797 aa10.61□□□□□ -0.71
AMBRA1-207ENST00000529553 MAGEB16A2A368 324 aa10.6□□□□□ -0.71
AMBRA1-207ENST00000529553 CTAGE15A4D2H0 777 aa10.6□□□□□ -0.71
AMBRA1-207ENST00000529553 LRIT2A6NDA9 550 aa10.6□□□□□ -0.71
AMBRA1-207ENST00000529553 LRRC14BA6NHZ5 514 aa10.6□□□□□ -0.71
AMBRA1-207ENST00000529553 TP53I11O14683 189 aa10.6□□□□□ -0.71
AMBRA1-207ENST00000529553 LIASO43766 372 aa10.6□□□□□ -0.71
AMBRA1-207ENST00000529553 ETHE1O95571 254 aa10.6□□□□□ -0.71
AMBRA1-207ENST00000529553 IGKV3-11P04433 115 aa10.6□□□□□ -0.71
AMBRA1-207ENST00000529553 CRHP06850 196 aa10.6□□□□□ -0.71
AMBRA1-207ENST00000529553 COX7A2P14406 83 aa10.6□□□□□ -0.71
AMBRA1-207ENST00000529553 SAT1P21673 171 aa10.6□□□□□ -0.71
AMBRA1-207ENST00000529553 MGAT1P26572 445 aa10.6□□□□□ -0.71
AMBRA1-207ENST00000529553 SLCO1A2P46721 670 aa10.6□□□□□ -0.71
AMBRA1-207ENST00000529553 LIM2P55344 173 aa10.6□□□□□ -0.71
AMBRA1-207ENST00000529553 CDK16Q00536 496 aa10.6□□□□□ -0.71
AMBRA1-207ENST00000529553 SPA17Q15506 151 aa10.6□□□□□ -0.71
AMBRA1-207ENST00000529553 C10orf62Q5T681 223 aaPredicted RBP10.6□□□□□ -0.71
AMBRA1-207ENST00000529553 NXPE4Q6UWF7 544 aa10.6□□□□□ -0.71
AMBRA1-207ENST00000529553 CTAGE6Q86UF2 777 aa10.6□□□□□ -0.71
AMBRA1-207ENST00000529553 PACS2Q86VP3 889 aa10.6□□□□□ -0.71
AMBRA1-207ENST00000529553 CNGA4Q8IV77 575 aa10.6□□□□□ -0.71
AMBRA1-207ENST00000529553 LMNTD2Q8IXW0 634 aa10.6□□□□□ -0.71
AMBRA1-207ENST00000529553 KLHDC8AQ8IYD2 350 aa10.6□□□□□ -0.71
AMBRA1-207ENST00000529553 CCDC170Q8IYT3 715 aa10.6□□□□□ -0.71
AMBRA1-207ENST00000529553 UBL4BQ8N7F7 174 aa10.6□□□□□ -0.71
AMBRA1-207ENST00000529553 ZNF611Q8N823 705 aa10.6□□□□□ -0.71
AMBRA1-207ENST00000529553 FAM47BQ8NA70 645 aa10.6□□□□□ -0.71
AMBRA1-207ENST00000529553 FAM13CQ8NE31 585 aa10.6□□□□□ -0.71
AMBRA1-207ENST00000529553 SLC44A1Q8WWI5 657 aa10.6□□□□□ -0.71
AMBRA1-207ENST00000529553 SREK1Q8WXA9 508 aaKnown RBP10.6□□□□□ -0.71
AMBRA1-207ENST00000529553 INTS12Q96CB8 462 aaKnown RBP10.6□□□□□ -0.71
AMBRA1-207ENST00000529553 FBXL8Q96CD0 374 aa10.6□□□□□ -0.71
AMBRA1-207ENST00000529553 MS4A6EQ96DS6 147 aa10.6□□□□□ -0.71
AMBRA1-207ENST00000529553 RUNDC3BQ96NL0 473 aa10.6□□□□□ -0.71
AMBRA1-207ENST00000529553 SLC39A3Q9BRY0 314 aa10.6□□□□□ -0.71
AMBRA1-207ENST00000529553 C19orf24Q9BVV8 132 aa10.6□□□□□ -0.71
AMBRA1-207ENST00000529553 ANGPTL4Q9BY76 406 aa10.6□□□□□ -0.71
AMBRA1-207ENST00000529553 TRIM54Q9BYV2 358 aa10.6□□□□□ -0.71
AMBRA1-207ENST00000529553 SDAD1Q9NVU7 687 aaKnown RBP eCLIP10.6□□□□□ -0.71
AMBRA1-207ENST00000529553 TMEM160Q9NX00 188 aa10.6□□□□□ -0.71
AMBRA1-207ENST00000529553 ARL15Q9NXU5 204 aa10.6□□□□□ -0.71
AMBRA1-207ENST00000529553 PSD3Q9NYI0 1048 aa10.6□□□□□ -0.71
AMBRA1-207ENST00000529553 AMFRQ9UKV5 643 aa10.6□□□□□ -0.71
AMBRA1-207ENST00000529553 TFR2Q9UP52 801 aa10.6□□□□□ -0.71
AMBRA1-207ENST00000529553 C15orf41Q9Y2V0 281 aa10.6□□□□□ -0.71
AMBRA1-207ENST00000529553 TNFSF12-TNFSF13A0A0A6YY99 330 aa10.59□□□□□ -0.71
AMBRA1-207ENST00000529553 TCRBV7S2A1N4TA0A589 114 aa10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms