RNA–Protein interactions for RNA: ENST00000508465.5

NUP54-206, Transcript of nucleoporin 54, humanhuman

TSL 3

Gene NUP54, Length 744 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-206ENST00000508465 MBOAT1Q6ZNC8 495 aa4.32□□□□□ -1.72
NUP54-206ENST00000508465 SHISA6Q6ZSJ9 500 aa4.32□□□□□ -1.72
NUP54-206ENST00000508465 CCDC25Q86WR0 208 aa4.32□□□□□ -1.72
NUP54-206ENST00000508465 PLD3Q8IV08 490 aa4.32□□□□□ -1.72
NUP54-206ENST00000508465 DCUN1D3Q8IWE4 304 aa4.32□□□□□ -1.72
NUP54-206ENST00000508465 DSELQ8IZU8 1212 aa4.32□□□□□ -1.72
NUP54-206ENST00000508465 OR4N4Q8N0Y3 316 aa4.32□□□□□ -1.72
NUP54-206ENST00000508465 PDIK1LQ8N165 341 aa4.32□□□□□ -1.72
NUP54-206ENST00000508465 METTL27Q8N6F8 245 aaPredicted RBP4.32□□□□□ -1.72
NUP54-206ENST00000508465 GPATCH11Q8N954 259 aa4.32□□□□□ -1.72
NUP54-206ENST00000508465 FBXO36Q8NEA4 188 aa4.32□□□□□ -1.72
NUP54-206ENST00000508465 OR9A1PQ8NGU1 263 aa4.32□□□□□ -1.72
NUP54-206ENST00000508465 OR2L8Q8NGY9 312 aa4.32□□□□□ -1.72
NUP54-206ENST00000508465 OR8K5Q8NH50 307 aa4.32□□□□□ -1.72
NUP54-206ENST00000508465 CD200R1Q8TD46 325 aa4.32□□□□□ -1.72
NUP54-206ENST00000508465 ZDHHC19Q8WVZ1 309 aaPredicted RBP4.32□□□□□ -1.72
NUP54-206ENST00000508465 STARD8Q92502 1023 aa4.32□□□□□ -1.72
NUP54-206ENST00000508465 SLCO2A1Q92959 643 aa4.32□□□□□ -1.72
NUP54-206ENST00000508465 RAD51AP1Q96B01 352 aa4.32□□□□□ -1.72
NUP54-206ENST00000508465 SNF8Q96H20 258 aa4.32□□□□□ -1.72
NUP54-206ENST00000508465 C16orf45Q96MC5 204 aaPredicted RBP4.32□□□□□ -1.72
NUP54-206ENST00000508465 FOPNLQ96NB1 174 aa4.32□□□□□ -1.72
NUP54-206ENST00000508465 PANX3Q96QZ0 392 aa4.32□□□□□ -1.72
NUP54-206ENST00000508465 MACROD1Q9BQ69 325 aa4.32□□□□□ -1.72
NUP54-206ENST00000508465 ERP44Q9BS26 406 aa4.32□□□□□ -1.72
NUP54-206ENST00000508465 DPH7Q9BTV6 452 aa4.32□□□□□ -1.72
NUP54-206ENST00000508465 SLC7A5P2Q9GIP4 190 aa4.32□□□□□ -1.72
NUP54-206ENST00000508465 CCDC68Q9H2F9 335 aa4.32□□□□□ -1.72
NUP54-206ENST00000508465 SAYSD1Q9NPB0 183 aa4.32□□□□□ -1.72
NUP54-206ENST00000508465 EURLQ9NYK6 297 aa4.32□□□□□ -1.72
NUP54-206ENST00000508465 EHD3Q9NZN3 535 aa4.32□□□□□ -1.72
NUP54-206ENST00000508465 DHCR7Q9UBM7 475 aaKnown RBP4.32□□□□□ -1.72
NUP54-206ENST00000508465 RNF14Q9UBS8 474 aa4.32□□□□□ -1.72
NUP54-206ENST00000508465 PLCL2Q9UPR0 1127 aa4.32□□□□□ -1.72
NUP54-206ENST00000508465 BTRCQ9Y297 605 aa4.32□□□□□ -1.72
NUP54-206ENST00000508465 SPEF1Q9Y4P9 236 aa4.32□□□□□ -1.72
NUP54-206ENST00000508465 PSAT1Q9Y617 370 aa4.32□□□□□ -1.72
NUP54-206ENST00000508465 TEX264Q9Y6I9 313 aa4.32□□□□□ -1.72
NUP54-206ENST00000508465 TENM4Q6N022 2769 aa4.32□□□□□ -1.72
NUP54-206ENST00000508465 GCN1Q92616 2671 aaKnown RBP4.31□□□□□ -1.72
NUP54-206ENST00000508465 A0A0J9YVX5 310 aa4.31□□□□□ -1.72
NUP54-206ENST00000508465 VSTM5A8MXK1 200 aa4.31□□□□□ -1.72
NUP54-206ENST00000508465 VWC2LB2RUY7 222 aa4.31□□□□□ -1.72
NUP54-206ENST00000508465 E7EQ34 232 aa4.31□□□□□ -1.72
NUP54-206ENST00000508465 H3BMH7 237 aa4.31□□□□□ -1.72
NUP54-206ENST00000508465 CCDC188H7C350 402 aa4.31□□□□□ -1.72
NUP54-206ENST00000508465 MYO1CO00159 1063 aa4.31□□□□□ -1.72
NUP54-206ENST00000508465 ZBTB14O43829 449 aa4.31□□□□□ -1.72
NUP54-206ENST00000508465 CNOT3O75175 753 aaKnown RBP4.31□□□□□ -1.72
NUP54-206ENST00000508465 VPS26AO75436 327 aa4.31□□□□□ -1.72
NUP54-206ENST00000508465 PSIP1O75475 530 aaKnown RBP4.31□□□□□ -1.72
NUP54-206ENST00000508465 FAM155BO75949 473 aa4.31□□□□□ -1.72
NUP54-206ENST00000508465 DNAJB5O75953 348 aa4.31□□□□□ -1.72
NUP54-206ENST00000508465 PRKD3O94806 890 aa4.31□□□□□ -1.72
NUP54-206ENST00000508465 TTC4O95801 387 aa4.31□□□□□ -1.72
NUP54-206ENST00000508465 SLC16A8O95907 504 aa4.31□□□□□ -1.72
NUP54-206ENST00000508465 MT-ND3P03897 115 aa4.31□□□□□ -1.72
NUP54-206ENST00000508465 TUBB4AP04350 444 aa4.31□□□□□ -1.72
NUP54-206ENST00000508465 KLK3P07288 261 aaPredicted RBP4.31□□□□□ -1.72
NUP54-206ENST00000508465 CAPN1P07384 714 aa4.31□□□□□ -1.72
NUP54-206ENST00000508465 NDUFB7P17568 137 aa4.31□□□□□ -1.72
NUP54-206ENST00000508465 ITGAXP20702 1163 aa4.31□□□□□ -1.72
NUP54-206ENST00000508465 SSTR1P30872 391 aa4.31□□□□□ -1.72
NUP54-206ENST00000508465 OTX2P32243 289 aa4.31□□□□□ -1.72
NUP54-206ENST00000508465 RPA3P35244 121 aaPredicted RBP4.31□□□□□ -1.72
NUP54-206ENST00000508465 RORAP35398 523 aa4.31□□□□□ -1.72
NUP54-206ENST00000508465 CCR10P46092 362 aa4.31□□□□□ -1.72
NUP54-206ENST00000508465 OR1D4P47884 311 aa4.31□□□□□ -1.72
NUP54-206ENST00000508465 CCL11P51671 97 aa4.31□□□□□ -1.72
NUP54-206ENST00000508465 PNLIPRP1P54315 467 aa4.31□□□□□ -1.72
NUP54-206ENST00000508465 ADARP55265 1226 aaKnown RBP4.31□□□□□ -1.72
NUP54-206ENST00000508465 POLE2P56282 527 aa4.31□□□□□ -1.72
NUP54-206ENST00000508465 TAS2R39P59534 338 aa4.31□□□□□ -1.72
NUP54-206ENST00000508465 CDC20Q12834 499 aa4.31□□□□□ -1.72
NUP54-206ENST00000508465 FAPQ12884 760 aa4.31□□□□□ -1.72
NUP54-206ENST00000508465 IL10RAQ13651 578 aa4.31□□□□□ -1.72
NUP54-206ENST00000508465 RAPSNQ13702 412 aa4.31□□□□□ -1.72
NUP54-206ENST00000508465 TTLL9Q3SXZ7 439 aa4.31□□□□□ -1.72
NUP54-206ENST00000508465 NKAIN1Q4KMZ8 207 aa4.31□□□□□ -1.72
NUP54-206ENST00000508465 C4orf46Q504U0 113 aa4.31□□□□□ -1.72
NUP54-206ENST00000508465 WASHC2DQ5SRD0 308 aa4.31□□□□□ -1.72
NUP54-206ENST00000508465 THEMIS2Q5TEJ8 643 aa4.31□□□□□ -1.72
NUP54-206ENST00000508465 PXDC1Q5TGL8 231 aa4.31□□□□□ -1.72
NUP54-206ENST00000508465 STEAP4Q687X5 459 aa4.31□□□□□ -1.72
NUP54-206ENST00000508465 DUPD1Q68J44 220 aa4.31□□□□□ -1.72
NUP54-206ENST00000508465 TMEM207Q6UWW9 146 aa4.31□□□□□ -1.72
NUP54-206ENST00000508465 C3orf62Q6ZUJ4 267 aa4.31□□□□□ -1.72
NUP54-206ENST00000508465 MAATS1Q7Z4T9 603 aa4.31□□□□□ -1.72
NUP54-206ENST00000508465 SYTL1Q8IYJ3 562 aa4.31□□□□□ -1.72
NUP54-206ENST00000508465 PRSS58Q8IYP2 241 aa4.31□□□□□ -1.72
NUP54-206ENST00000508465 ZBED8Q8IZ13 594 aa4.31□□□□□ -1.72
NUP54-206ENST00000508465 SPATA6LQ8N4H0 392 aa4.31□□□□□ -1.72
NUP54-206ENST00000508465 ENDOVQ8N8Q3 282 aaKnown RBP4.31□□□□□ -1.72
NUP54-206ENST00000508465 OR2L3Q8NG85 312 aa4.31□□□□□ -1.72
NUP54-206ENST00000508465 OR2A1Q8NGT9 310 aa4.31□□□□□ -1.72
NUP54-206ENST00000508465 PYROXD1Q8WU10 500 aa4.31□□□□□ -1.72
NUP54-206ENST00000508465 APOBEC4Q8WW27 367 aaKnown RBP4.31□□□□□ -1.72
NUP54-206ENST00000508465 SMPDL3AQ92484 453 aa4.31□□□□□ -1.72
NUP54-206ENST00000508465 SLC22A18Q96BI1 424 aa4.31□□□□□ -1.72
NUP54-206ENST00000508465 LINGO1Q96FE5 620 aa4.31□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms