RNA–Protein interactions for RNA: ENST00000506063.1

TCOF1-208, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 4

Gene TCOF1, Length 526 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-208ENST00000506063 IFI16Q16666 785 aaKnown RBP2.96□□□□□ -1.94
TCOF1-208ENST00000506063 NDUFA9Q16795 377 aa2.96□□□□□ -1.94
TCOF1-208ENST00000506063 MPEG1Q2M385 716 aa2.96□□□□□ -1.94
TCOF1-208ENST00000506063 MST1LQ2TV78 715 aa2.96□□□□□ -1.94
TCOF1-208ENST00000506063 CTU2Q2VPK5 515 aaKnown RBP2.96□□□□□ -1.94
TCOF1-208ENST00000506063 IQCCQ4KMZ1 466 aa2.96□□□□□ -1.94
TCOF1-208ENST00000506063 OXLD1Q5BKU9 147 aa2.96□□□□□ -1.94
TCOF1-208ENST00000506063 PIGGQ5H8A4 983 aa2.96□□□□□ -1.94
TCOF1-208ENST00000506063 BRICD5Q6PL45 260 aa2.96□□□□□ -1.94
TCOF1-208ENST00000506063 ENPP6Q6UWR7 440 aa2.96□□□□□ -1.94
TCOF1-208ENST00000506063 DOK3Q7L591 496 aa2.96□□□□□ -1.94
TCOF1-208ENST00000506063 GLT6D1Q7Z4J2 308 aa2.96□□□□□ -1.94
TCOF1-208ENST00000506063 YRDCQ86U90 279 aaKnown RBP2.96□□□□□ -1.94
TCOF1-208ENST00000506063 GLCCI1Q86VQ1 547 aa2.96□□□□□ -1.94
TCOF1-208ENST00000506063 ZNF677Q86XU0 584 aa2.96□□□□□ -1.94
TCOF1-208ENST00000506063 GRAMD2AQ8IUY3 354 aa2.96□□□□□ -1.94
TCOF1-208ENST00000506063 PIANPQ8IYJ0 282 aa2.96□□□□□ -1.94
TCOF1-208ENST00000506063 RCOR2Q8IZ40 523 aa2.96□□□□□ -1.94
TCOF1-208ENST00000506063 MUC15Q8N387 334 aa2.96□□□□□ -1.94
TCOF1-208ENST00000506063 KIR3DL3Q8N743 410 aa2.96□□□□□ -1.94
TCOF1-208ENST00000506063 SIGLECL1Q8N7X8 197 aa2.96□□□□□ -1.94
TCOF1-208ENST00000506063 FAM83FQ8NEG4 500 aaPredicted RBP2.96□□□□□ -1.94
TCOF1-208ENST00000506063 OR4K2Q8NGD2 314 aa2.96□□□□□ -1.94
TCOF1-208ENST00000506063 LKAAEAR1Q8TD35 194 aa2.96□□□□□ -1.94
TCOF1-208ENST00000506063 KCTD4Q8WVF5 259 aa2.96□□□□□ -1.94
TCOF1-208ENST00000506063 ATL1Q8WXF7 558 aa2.96□□□□□ -1.94
TCOF1-208ENST00000506063 C22orf15Q8WYQ4 148 aa2.96□□□□□ -1.94
TCOF1-208ENST00000506063 FIG4Q92562 907 aa2.96□□□□□ -1.94
TCOF1-208ENST00000506063 RERGQ96A58 199 aaPredicted RBP2.96□□□□□ -1.94
TCOF1-208ENST00000506063 TMIGD2Q96BF3 282 aa2.96□□□□□ -1.94
TCOF1-208ENST00000506063 S100PBPQ96BU1 408 aa2.96□□□□□ -1.94
TCOF1-208ENST00000506063 IQCDQ96DY2 449 aa2.96□□□□□ -1.94
TCOF1-208ENST00000506063 SPACA9Q96E40 222 aaPredicted RBP2.96□□□□□ -1.94
TCOF1-208ENST00000506063 DCUN1D1Q96GG9 259 aa2.96□□□□□ -1.94
TCOF1-208ENST00000506063 PDLIM2Q96JY6 352 aa2.96□□□□□ -1.94
TCOF1-208ENST00000506063 JSRP1Q96MG2 331 aaPredicted RBP2.96□□□□□ -1.94
TCOF1-208ENST00000506063 COL21A1Q96P44 957 aa2.96□□□□□ -1.94
TCOF1-208ENST00000506063 SNX18Q96RF0 628 aa2.96□□□□□ -1.94
TCOF1-208ENST00000506063 SRPK1Q96SB4 655 aaKnown RBP2.96□□□□□ -1.94
TCOF1-208ENST00000506063 KRT12Q99456 494 aa2.96□□□□□ -1.94
TCOF1-208ENST00000506063 COPS8Q99627 209 aa2.96□□□□□ -1.94
TCOF1-208ENST00000506063 DHRS9Q9BPW9 319 aa2.96□□□□□ -1.94
TCOF1-208ENST00000506063 BPIFA3Q9BQP9 254 aa2.96□□□□□ -1.94
TCOF1-208ENST00000506063 ACAT2Q9BWD1 397 aa2.96□□□□□ -1.94
TCOF1-208ENST00000506063 TMPRSS13Q9BYE2 586 aa2.96□□□□□ -1.94
TCOF1-208ENST00000506063 SLC25A51Q9H1U9 297 aa2.96□□□□□ -1.94
TCOF1-208ENST00000506063 ZWILCHQ9H900 591 aa2.96□□□□□ -1.94
TCOF1-208ENST00000506063 RNF122Q9H9V4 155 aa2.96□□□□□ -1.94
TCOF1-208ENST00000506063 PCDH18Q9HCL0 1135 aa2.96□□□□□ -1.94
TCOF1-208ENST00000506063 PRDM9Q9NQV7 894 aa2.96□□□□□ -1.94
TCOF1-208ENST00000506063 PLSCR4Q9NRQ2 329 aa2.96□□□□□ -1.94
TCOF1-208ENST00000506063 FAIMQ9NVQ4 179 aa2.96□□□□□ -1.94
TCOF1-208ENST00000506063 ZDHHC3Q9NYG2 299 aa2.96□□□□□ -1.94
TCOF1-208ENST00000506063 NPAP1Q9NZP6 1156 aa2.96□□□□□ -1.94
TCOF1-208ENST00000506063 MYO1AQ9UBC5 1043 aa2.96□□□□□ -1.94
TCOF1-208ENST00000506063 DLGAP4Q9Y2H0 992 aa2.96□□□□□ -1.94
TCOF1-208ENST00000506063 NAALAD2Q9Y3Q0 740 aa2.96□□□□□ -1.94
TCOF1-208ENST00000506063 TSC22D4Q9Y3Q8 395 aa2.96□□□□□ -1.94
TCOF1-208ENST00000506063 PKHD1P08F94 4074 aa2.95□□□□□ -1.94
TCOF1-208ENST00000506063 C5orf63A6NC05 138 aa2.95□□□□□ -1.94
TCOF1-208ENST00000506063 GOLGA6L6A8MZA4 724 aa2.95□□□□□ -1.94
TCOF1-208ENST00000506063 B4DSR2 109 aa2.95□□□□□ -1.94
TCOF1-208ENST00000506063 B4DXG7 233 aa2.95□□□□□ -1.94
TCOF1-208ENST00000506063 C4orf51C9J302 202 aa2.95□□□□□ -1.94
TCOF1-208ENST00000506063 CBFA2T2O43439 604 aa2.95□□□□□ -1.94
TCOF1-208ENST00000506063 KIF5CO60282 957 aa2.95□□□□□ -1.94
TCOF1-208ENST00000506063 KDM1AO60341 852 aa2.95□□□□□ -1.94
TCOF1-208ENST00000506063 GCM2O75603 506 aaPredicted RBP2.95□□□□□ -1.94
TCOF1-208ENST00000506063 GFPT2O94808 682 aa2.95□□□□□ -1.94
TCOF1-208ENST00000506063 AP2A2O94973 939 aa2.95□□□□□ -1.94
TCOF1-208ENST00000506063 C1orf105O95561 183 aa2.95□□□□□ -1.94
TCOF1-208ENST00000506063 STAMBPO95630 424 aa2.95□□□□□ -1.94
TCOF1-208ENST00000506063 MPIG6BO95866 241 aa2.95□□□□□ -1.94
TCOF1-208ENST00000506063 CALB1P05937 261 aa2.95□□□□□ -1.94
TCOF1-208ENST00000506063 FBXO45P0C2W1 286 aa2.95□□□□□ -1.94
TCOF1-208ENST00000506063 PYGBP11216 843 aa2.95□□□□□ -1.94
TCOF1-208ENST00000506063 RALBP11234 206 aa2.95□□□□□ -1.94
TCOF1-208ENST00000506063 UCHL3P15374 230 aa2.95□□□□□ -1.94
TCOF1-208ENST00000506063 FERP16591 822 aa2.95□□□□□ -1.94
TCOF1-208ENST00000506063 ADRA2CP18825 462 aa2.95□□□□□ -1.94
TCOF1-208ENST00000506063 PAMP19021 973 aa2.95□□□□□ -1.94
TCOF1-208ENST00000506063 CMPK1P30085 196 aa2.95□□□□□ -1.94
TCOF1-208ENST00000506063 CCR7P32248 378 aa2.95□□□□□ -1.94
TCOF1-208ENST00000506063 CD68P34810 354 aaPredicted RBP2.95□□□□□ -1.94
TCOF1-208ENST00000506063 GRK3P35626 688 aa2.95□□□□□ -1.94
TCOF1-208ENST00000506063 BDKRB1P46663 353 aa2.95□□□□□ -1.94
TCOF1-208ENST00000506063 HNRNPFP52597 415 aaKnown RBP2.95□□□□□ -1.94
TCOF1-208ENST00000506063 ZNF140P52738 457 aaPredicted RBP2.95□□□□□ -1.94
TCOF1-208ENST00000506063 CHN2P52757 468 aa2.95□□□□□ -1.94
TCOF1-208ENST00000506063 JAM2P57087 298 aa2.95□□□□□ -1.94
TCOF1-208ENST00000506063 POLR2FP61218 127 aaKnown RBP2.95□□□□□ -1.94
TCOF1-208ENST00000506063 RNF4P78317 190 aa2.95□□□□□ -1.94
TCOF1-208ENST00000506063 GBE1Q04446 702 aa2.95□□□□□ -1.94
TCOF1-208ENST00000506063 PRDX1Q06830 199 aaKnown RBP2.95□□□□□ -1.94
TCOF1-208ENST00000506063 PPIDQ08752 370 aaKnown RBP2.95□□□□□ -1.94
TCOF1-208ENST00000506063 RIN1Q13671 783 aa2.95□□□□□ -1.94
TCOF1-208ENST00000506063 BMPR2Q13873 1038 aa2.95□□□□□ -1.94
TCOF1-208ENST00000506063 SLC9A3R2Q15599 337 aa2.95□□□□□ -1.94
TCOF1-208ENST00000506063 SLC1A5Q15758 541 aa2.95□□□□□ -1.94
TCOF1-208ENST00000506063 DBN1Q16643 649 aa2.95□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms