RNA–Protein interactions for RNA: ENST00000502357.5

LMNA-218, Transcript of lamin A/C, humanhuman

TSL 4

Gene LMNA, Length 537 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-218ENST00000502357 TUBAL3A6NHL2 446 aa11.61□□□□□ -0.55
LMNA-218ENST00000502357 MBD3L5A6NJ08 208 aaPredicted RBP11.61□□□□□ -0.55
LMNA-218ENST00000502357 SIAH2O43255 324 aa11.61□□□□□ -0.55
LMNA-218ENST00000502357 B3GALT2O43825 422 aa11.61□□□□□ -0.55
LMNA-218ENST00000502357 BANF1O75531 89 aa11.61□□□□□ -0.55
LMNA-218ENST00000502357 IFNA16P05015 189 aa11.61□□□□□ -0.55
LMNA-218ENST00000502357 FBXO45P0C2W1 286 aa11.61□□□□□ -0.55
LMNA-218ENST00000502357 ZNF37AP17032 561 aaPredicted RBP11.61□□□□□ -0.55
LMNA-218ENST00000502357 TRPC1P48995 793 aa11.61□□□□□ -0.55
LMNA-218ENST00000502357 AGFG1P52594 562 aaKnown RBP11.61□□□□□ -0.55
LMNA-218ENST00000502357 DUSP8Q13202 625 aa11.61□□□□□ -0.55
LMNA-218ENST00000502357 E2F2Q14209 437 aa11.61□□□□□ -0.55
LMNA-218ENST00000502357 SLBPQ14493 270 aaKnown RBP eCLIP11.61□□□□□ -0.55
LMNA-218ENST00000502357 DCST1Q5T197 706 aa11.61□□□□□ -0.55
LMNA-218ENST00000502357 RNASEH2BQ5TBB1 312 aaKnown RBP11.61□□□□□ -0.55
LMNA-218ENST00000502357 PRAMEF20Q5VT98 475 aa11.61□□□□□ -0.55
LMNA-218ENST00000502357 VASNQ6EMK4 673 aa11.61□□□□□ -0.55
LMNA-218ENST00000502357 TMIGD1Q6UXZ0 262 aa11.61□□□□□ -0.55
LMNA-218ENST00000502357 CXXC5Q7LFL8 322 aaKnown RBP11.61□□□□□ -0.55
LMNA-218ENST00000502357 MAATS1Q7Z4T9 603 aa11.61□□□□□ -0.55
LMNA-218ENST00000502357 LACC1Q8IV20 430 aa11.61□□□□□ -0.55
LMNA-218ENST00000502357 OR10G3Q8NGC4 313 aa11.61□□□□□ -0.55
LMNA-218ENST00000502357 MBD3L2Q8NHZ7 208 aaPredicted RBP11.61□□□□□ -0.55
LMNA-218ENST00000502357 ANKRD49Q8WVL7 239 aa11.61□□□□□ -0.55
LMNA-218ENST00000502357 MAIP1Q8WWC4 291 aa11.61□□□□□ -0.55
LMNA-218ENST00000502357 ANKRD7Q92527 254 aa11.61□□□□□ -0.55
LMNA-218ENST00000502357 RHBDF1Q96CC6 855 aa11.61□□□□□ -0.55
LMNA-218ENST00000502357 SPACA9Q96E40 222 aaPredicted RBP11.61□□□□□ -0.55
LMNA-218ENST00000502357 WDR34Q96EX3 536 aa11.61□□□□□ -0.55
LMNA-218ENST00000502357 SENP5Q96HI0 755 aaPredicted RBP11.61□□□□□ -0.55
LMNA-218ENST00000502357 FAR2Q96K12 515 aa11.61□□□□□ -0.55
LMNA-218ENST00000502357 REXO4Q9GZR2 422 aaKnown RBP11.61□□□□□ -0.55
LMNA-218ENST00000502357 EPB41L4BQ9H329 900 aa11.61□□□□□ -0.55
LMNA-218ENST00000502357 NEUROD4Q9HD90 331 aa11.61□□□□□ -0.55
LMNA-218ENST00000502357 VWA7Q9Y334 891 aa11.61□□□□□ -0.55
LMNA-218ENST00000502357 MED12LQ86YW9 2145 aa11.6□□□□□ -0.55
LMNA-218ENST00000502357 STAB1Q9NY15 2570 aa11.6□□□□□ -0.55
LMNA-218ENST00000502357 EXPH5Q8NEV8 1989 aa11.6□□□□□ -0.55
LMNA-218ENST00000502357 CD8B2A6NJW9 211 aa11.6□□□□□ -0.55
LMNA-218ENST00000502357 TAPBPO15533 448 aa11.6□□□□□ -0.55
LMNA-218ENST00000502357 FGF17O60258 216 aa11.6□□□□□ -0.55
LMNA-218ENST00000502357 SCELO95171 688 aa11.6□□□□□ -0.55
LMNA-218ENST00000502357 WISP3O95389 354 aaPredicted RBP11.6□□□□□ -0.55
LMNA-218ENST00000502357 PGAM1P18669 254 aa11.6□□□□□ -0.55
LMNA-218ENST00000502357 EPORP19235 508 aa11.6□□□□□ -0.55
LMNA-218ENST00000502357 SAT1P21673 171 aa11.6□□□□□ -0.55
LMNA-218ENST00000502357 GSTM2P28161 218 aa11.6□□□□□ -0.55
LMNA-218ENST00000502357 CXCR5P32302 372 aa11.6□□□□□ -0.55
LMNA-218ENST00000502357 SLCO1A2P46721 670 aa11.6□□□□□ -0.55
LMNA-218ENST00000502357 MTTPP55157 894 aa11.6□□□□□ -0.55
LMNA-218ENST00000502357 ID2Q02363 134 aa11.6□□□□□ -0.55
LMNA-218ENST00000502357 EFTUD2Q15029 972 aaKnown RBP eCLIP11.6□□□□□ -0.55
LMNA-218ENST00000502357 PCBP2Q15366 365 aaKnown RBP eCLIP11.6□□□□□ -0.55
LMNA-218ENST00000502357 CYP1B1Q16678 543 aa11.6□□□□□ -0.55
LMNA-218ENST00000502357 NHSL2Q5HYW2 709 aa11.6□□□□□ -0.55
LMNA-218ENST00000502357 ADGRE4PQ86SQ3 457 aa11.6□□□□□ -0.55
LMNA-218ENST00000502357 TXLNBQ8N3L3 684 aa11.6□□□□□ -0.55
LMNA-218ENST00000502357 RASGEF1CQ8N431 466 aa11.6□□□□□ -0.55
LMNA-218ENST00000502357 SLC15A4Q8N697 577 aa11.6□□□□□ -0.55
LMNA-218ENST00000502357 ZNF441Q8N8Z8 693 aa11.6□□□□□ -0.55
LMNA-218ENST00000502357 TTLQ8NG68 377 aa11.6□□□□□ -0.55
LMNA-218ENST00000502357 WDYHV1Q96HA8 205 aa11.6□□□□□ -0.55
LMNA-218ENST00000502357 F2RL3Q96RI0 385 aa11.6□□□□□ -0.55
LMNA-218ENST00000502357 TMEM79Q9BSE2 394 aa11.6□□□□□ -0.55
LMNA-218ENST00000502357 MCMBPQ9BTE3 642 aa11.6□□□□□ -0.55
LMNA-218ENST00000502357 TRIM54Q9BYV2 358 aa11.6□□□□□ -0.55
LMNA-218ENST00000502357 LYRM4Q9HD34 91 aa11.6□□□□□ -0.55
LMNA-218ENST00000502357 HOMER3Q9NSC5 361 aa11.6□□□□□ -0.55
LMNA-218ENST00000502357 MTRF1LQ9UGC7 380 aaKnown RBP11.6□□□□□ -0.55
LMNA-218ENST00000502357 MRPS33Q9Y291 106 aaKnown RBP11.6□□□□□ -0.55
LMNA-218ENST00000502357 OARD1Q9Y530 152 aa11.6□□□□□ -0.55
LMNA-218ENST00000502357 HIVEP2P31629 2446 aa11.6□□□□□ -0.55
LMNA-218ENST00000502357 ANKRD33BA6NCL7 494 aa11.59□□□□□ -0.55
LMNA-218ENST00000502357 NPEPPSL1A6NEC2 478 aa11.59□□□□□ -0.55
LMNA-218ENST00000502357 LRATO95237 230 aa11.59□□□□□ -0.55
LMNA-218ENST00000502357 IL18BPO95998 194 aa11.59□□□□□ -0.55
LMNA-218ENST00000502357 HPNP05981 417 aa11.59□□□□□ -0.55
LMNA-218ENST00000502357 GNAZP19086 355 aa11.59□□□□□ -0.55
LMNA-218ENST00000502357 ATP5A1P25705 553 aaKnown RBP11.59□□□□□ -0.55
LMNA-218ENST00000502357 GGT5P36269 586 aa11.59□□□□□ -0.55
LMNA-218ENST00000502357 STT3AP46977 705 aa11.59□□□□□ -0.55
LMNA-218ENST00000502357 FOXF2Q12947 444 aa11.59□□□□□ -0.55
LMNA-218ENST00000502357 PDAP1Q13442 181 aaKnown RBP11.59□□□□□ -0.55
LMNA-218ENST00000502357 SERTAD2Q14140 314 aa11.59□□□□□ -0.55
LMNA-218ENST00000502357 NTRK2Q16620 822 aa11.59□□□□□ -0.55
LMNA-218ENST00000502357 TRMT10BQ6PF06 316 aaKnown RBP11.59□□□□□ -0.55
LMNA-218ENST00000502357 LRRC75A-AS1Q8N1F1 130 aa11.59□□□□□ -0.55
LMNA-218ENST00000502357 C9orf106Q8NAJ2 232 aa11.59□□□□□ -0.55
LMNA-218ENST00000502357 NUDT8Q8WV74 236 aa11.59□□□□□ -0.55
LMNA-218ENST00000502357 NANOS1Q8WY41 292 aaKnown RBP11.59□□□□□ -0.55
LMNA-218ENST00000502357 CERS2Q96G23 380 aa11.59□□□□□ -0.55
LMNA-218ENST00000502357 PIP5K1AQ99755 562 aa11.59□□□□□ -0.55
LMNA-218ENST00000502357 PITHD1Q9GZP4 211 aaPredicted RBP11.59□□□□□ -0.55
LMNA-218ENST00000502357 EXO5Q9H790 373 aa11.59□□□□□ -0.55
LMNA-218ENST00000502357 CNIH4Q9P003 139 aa11.59□□□□□ -0.55
LMNA-218ENST00000502357 BOKQ9UMX3 212 aaPredicted RBP11.59□□□□□ -0.55
LMNA-218ENST00000502357 PSAT1Q9Y617 370 aa11.59□□□□□ -0.55
LMNA-218ENST00000502357 CUBNO60494 3623 aa11.59□□□□□ -0.55
LMNA-218ENST00000502357 RTCAO00442 366 aaKnown RBP11.58□□□□□ -0.56
LMNA-218ENST00000502357 IL2RAP01589 272 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms